RNA–Protein interactions for RNA: ENST00000489935.1

KCNC4-207, Transcript of potassium voltage-gated channel subfamily C member 4, humanhuman

TSL 1 (best)

Gene KCNC4, Length 1,955 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC4-207ENST00000489935 MRPL52Q86TS9 123 aaKnown RBP19.73■□□□□ 0.75
KCNC4-207ENST00000489935 ODF3Q96PU9 254 aa19.73■□□□□ 0.75
KCNC4-207ENST00000489935 Q8N8P6 123 aa19.72■□□□□ 0.75
KCNC4-207ENST00000489935 ESM1Q9NQ30 184 aa19.72■□□□□ 0.75
KCNC4-207ENST00000489935 C7orf71A4D174 169 aa19.72■□□□□ 0.75
KCNC4-207ENST00000489935 PRSS47A8MTI9 375 aa19.72■□□□□ 0.75
KCNC4-207ENST00000489935 LEPP41159 167 aa19.72■□□□□ 0.75
KCNC4-207ENST00000489935 ITPR2Q14571 2701 aa19.72■□□□□ 0.75
KCNC4-207ENST00000489935 FAM159AQ6UWV7 190 aa19.71■□□□□ 0.75
KCNC4-207ENST00000489935 C14orf178Q8N769 122 aaPredicted RBP19.71■□□□□ 0.75
KCNC4-207ENST00000489935 OR1N2Q8NGR9 330 aa19.71■□□□□ 0.75
KCNC4-207ENST00000489935 KHDC1LQ5JSQ8 128 aa19.7■□□□□ 0.74
KCNC4-207ENST00000489935 MRAP2Q96G30 205 aa19.7■□□□□ 0.74
KCNC4-207ENST00000489935 ST20Q9HBF5 79 aa19.7■□□□□ 0.74
KCNC4-207ENST00000489935 TRAV12-2A0A075B6T6 113 aa19.7■□□□□ 0.74
KCNC4-207ENST00000489935 FCER1GP30273 86 aa19.7■□□□□ 0.74
KCNC4-207ENST00000489935 HNRNPA3P51991 378 aaKnown RBP19.7■□□□□ 0.74
KCNC4-207ENST00000489935 DEFB125Q8N687 156 aa19.7■□□□□ 0.74
KCNC4-207ENST00000489935 TSPOP30536 169 aa19.69■□□□□ 0.74
KCNC4-207ENST00000489935 DPF1Q92782 380 aa19.69■□□□□ 0.74
KCNC4-207ENST00000489935 IFI27L1Q96BM0 104 aa19.69■□□□□ 0.74
KCNC4-207ENST00000489935 DPH3P1Q9H4G8 78 aa19.69■□□□□ 0.74
KCNC4-207ENST00000489935 KLHL30-AS1Q8NEE0 82 aa19.68■□□□□ 0.74
KCNC4-207ENST00000489935 ACANP16112 2415 aa19.68■□□□□ 0.74
KCNC4-207ENST00000489935 OR9G4Q8NGQ1 327 aa19.67■□□□□ 0.74
KCNC4-207ENST00000489935 DLX4Q92988 240 aaPredicted RBP19.67■□□□□ 0.74
KCNC4-207ENST00000489935 TP73-AS1Q9UF72 201 aa19.67■□□□□ 0.74
KCNC4-207ENST00000489935 NXPH4O95158 308 aa19.66■□□□□ 0.74
KCNC4-207ENST00000489935 YAE1D1Q9NRH1 226 aa19.66■□□□□ 0.74
KCNC4-207ENST00000489935 CUBNO60494 3623 aa19.66■□□□□ 0.74
KCNC4-207ENST00000489935 HSBP1L1C9JCN9 74 aa19.66■□□□□ 0.74
KCNC4-207ENST00000489935 CD5LO43866 347 aa19.66■□□□□ 0.74
KCNC4-207ENST00000489935 CD7P09564 240 aa19.66■□□□□ 0.74
KCNC4-207ENST00000489935 SPINK13Q1W4C9 94 aa19.66■□□□□ 0.74
KCNC4-207ENST00000489935 FOXI2Q6ZQN5 318 aa19.66■□□□□ 0.74
KCNC4-207ENST00000489935 C18orf15Q96N68 181 aa19.66■□□□□ 0.74
KCNC4-207ENST00000489935 FOXC2Q99958 501 aa19.66■□□□□ 0.74
KCNC4-207ENST00000489935 CDKN1BP46527 198 aa19.65■□□□□ 0.74
KCNC4-207ENST00000489935 LGALS9BQ3B8N2 356 aa19.65■□□□□ 0.74
KCNC4-207ENST00000489935 LGALS9CQ6DKI2 356 aa19.65■□□□□ 0.74
KCNC4-207ENST00000489935 TMEM158Q8WZ71 300 aa19.65■□□□□ 0.74
KCNC4-207ENST00000489935 RASL10AQ92737 203 aa19.65■□□□□ 0.74
KCNC4-207ENST00000489935 NF1P21359 2839 aa19.65■□□□□ 0.74
KCNC4-207ENST00000489935 DUSP14O95147 198 aaKnown RBP19.64■□□□□ 0.74
KCNC4-207ENST00000489935 NUTF2P61970 127 aaKnown RBP19.64■□□□□ 0.74
KCNC4-207ENST00000489935 BATFQ16520 125 aa19.64■□□□□ 0.74
KCNC4-207ENST00000489935 AMTNQ6UX39 209 aa19.64■□□□□ 0.74
KCNC4-207ENST00000489935 PEMTQ9UBM1 199 aa19.64■□□□□ 0.74
KCNC4-207ENST00000489935 TCAPO15273 167 aa19.64■□□□□ 0.73
KCNC4-207ENST00000489935 GOLT1BQ9Y3E0 138 aa19.64■□□□□ 0.73
KCNC4-207ENST00000489935 MRPS16Q9Y3D3 137 aaKnown RBP19.63■□□□□ 0.73
KCNC4-207ENST00000489935 MGPP08493 103 aa19.63■□□□□ 0.73
KCNC4-207ENST00000489935 AP1S3Q96PC3 154 aa19.63■□□□□ 0.73
KCNC4-207ENST00000489935 KIF25-AS1Q9Y6Z4 181 aa19.63■□□□□ 0.73
KCNC4-207ENST00000489935 LAGE3Q14657 143 aa19.62■□□□□ 0.73
KCNC4-207ENST00000489935 TMEM61Q8N0U2 210 aa19.62■□□□□ 0.73
KCNC4-207ENST00000489935 RPL39LQ96EH5 51 aaKnown RBP19.62■□□□□ 0.73
KCNC4-207ENST00000489935 KNCNA6PVL3 124 aa19.61■□□□□ 0.73
KCNC4-207ENST00000489935 LINC00315P59091 139 aa19.61■□□□□ 0.73
KCNC4-207ENST00000489935 JPT2Q9H910 190 aa19.61■□□□□ 0.73
KCNC4-207ENST00000489935 IGHV3-16A0A0C4DH30 117 aa19.61■□□□□ 0.73
KCNC4-207ENST00000489935 DEFB131AP59861 70 aa19.61■□□□□ 0.73
KCNC4-207ENST00000489935 MDFICQ9P1T7 246 aa19.61■□□□□ 0.73
KCNC4-207ENST00000489935 UNC79Q9P2D8 2635 aa19.6■□□□□ 0.73
KCNC4-207ENST00000489935 POM121L12Q8N7R1 296 aa19.6■□□□□ 0.73
KCNC4-207ENST00000489935 C11orf44Q8N8P7 122 aa19.6■□□□□ 0.73
KCNC4-207ENST00000489935 SMIM2Q9BVW6 85 aa19.6■□□□□ 0.73
KCNC4-207ENST00000489935 Q8N1Y9 231 aa19.59■□□□□ 0.73
KCNC4-207ENST00000489935 C9orf85Q96MD7 179 aa19.59■□□□□ 0.73
KCNC4-207ENST00000489935 ANK3Q12955 4377 aaKnown RBP19.58■□□□□ 0.73
KCNC4-207ENST00000489935 SMIM17P0DL12 118 aa19.58■□□□□ 0.73
KCNC4-207ENST00000489935 SUMO2P61956 95 aaKnown RBP19.58■□□□□ 0.73
KCNC4-207ENST00000489935 ZNF124Q15973 351 aa19.58■□□□□ 0.73
KCNC4-207ENST00000489935 RAX2Q96IS3 184 aa19.58■□□□□ 0.73
KCNC4-207ENST00000489935 DKK2Q9UBU2 259 aa19.58■□□□□ 0.73
KCNC4-207ENST00000489935 IGHV1OR15-1A0A075B7D0 117 aa19.57■□□□□ 0.72
KCNC4-207ENST00000489935 C20orf78Q9BR46 151 aa19.57■□□□□ 0.72
KCNC4-207ENST00000489935 DEFB114Q30KQ6 69 aa19.57■□□□□ 0.72
KCNC4-207ENST00000489935 SLC25A34Q6PIV7 304 aa19.57■□□□□ 0.72
KCNC4-207ENST00000489935 TRAV2A0A0B4J234 112 aa19.56■□□□□ 0.72
KCNC4-207ENST00000489935 CD28P10747 220 aa19.56■□□□□ 0.72
KCNC4-207ENST00000489935 A0A1W2PRX2 142 aa19.55■□□□□ 0.72
KCNC4-207ENST00000489935 ANKRD39Q53RE8 183 aa19.55■□□□□ 0.72
KCNC4-207ENST00000489935 RBMY1A1P0DJD3 496 aaKnown RBP19.55■□□□□ 0.72
KCNC4-207ENST00000489935 RBMY1CP0DJD4 496 aa19.55■□□□□ 0.72
KCNC4-207ENST00000489935 RBMY1FQ15415 496 aaKnown RBP19.55■□□□□ 0.72
KCNC4-207ENST00000489935 STPG4Q8N801 248 aa19.55■□□□□ 0.72
KCNC4-207ENST00000489935 DYNLRB2Q8TF09 96 aa19.55■□□□□ 0.72
KCNC4-207ENST00000489935 A0A087WWL8 130 aa19.54■□□□□ 0.72
KCNC4-207ENST00000489935 H3BMM0 161 aa19.54■□□□□ 0.72
KCNC4-207ENST00000489935 HLA-DRB4P13762 266 aa19.54■□□□□ 0.72
KCNC4-207ENST00000489935 HINT1P49773 126 aaPredicted RBP19.54■□□□□ 0.72
KCNC4-207ENST00000489935 HLA-DRB4X5D2U9 266 aa19.54■□□□□ 0.72
KCNC4-207ENST00000489935 A8MTW9 85 aa19.53■□□□□ 0.72
KCNC4-207ENST00000489935 PRSS1P07477 247 aa19.53■□□□□ 0.72
KCNC4-207ENST00000489935 RBMY1BA6NDE4 496 aaKnown RBP19.53■□□□□ 0.72
KCNC4-207ENST00000489935 RBMY1EA6NEQ0 496 aaKnown RBP19.53■□□□□ 0.72
KCNC4-207ENST00000489935 RBMY1DP0C7P1 496 aaKnown RBP19.53■□□□□ 0.72
KCNC4-207ENST00000489935 ODF1Q14990 250 aa19.53■□□□□ 0.72
KCNC4-207ENST00000489935 CD300EQ496F6 205 aaPredicted RBP19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms