RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 J3QLW9 94 aa0.5□□□□□ -2.33
CCDC39-206ENST00000489868 K7EP34 96 aa0.5□□□□□ -2.33
CCDC39-206ENST00000489868 GNGT2O14610 69 aa0.5□□□□□ -2.33
CCDC39-206ENST00000489868 SSSCA1O60232 199 aa0.5□□□□□ -2.33
CCDC39-206ENST00000489868 PROSCO94903 275 aa0.5□□□□□ -2.33
CCDC39-206ENST00000489868 UBL3O95164 117 aa0.5□□□□□ -2.33
CCDC39-206ENST00000489868 SFT2D2O95562 160 aa0.5□□□□□ -2.33
CCDC39-206ENST00000489868 GYPAP02724 150 aa0.5□□□□□ -2.33
CCDC39-206ENST00000489868 NMBP08949 121 aa0.5□□□□□ -2.33
CCDC39-206ENST00000489868 COX6A1P12074 109 aa0.5□□□□□ -2.33
CCDC39-206ENST00000489868 SLC25A6P12236 298 aa0.5□□□□□ -2.33
CCDC39-206ENST00000489868 PIPP12273 146 aaPredicted RBP0.5□□□□□ -2.33
CCDC39-206ENST00000489868 CCL4P13236 92 aa0.5□□□□□ -2.33
CCDC39-206ENST00000489868 COX7CP15954 63 aa0.5□□□□□ -2.33
CCDC39-206ENST00000489868 NFYAP23511 347 aaPredicted RBP0.5□□□□□ -2.33
CCDC39-206ENST00000489868 ASIPP42127 132 aa0.5□□□□□ -2.33
CCDC39-206ENST00000489868 ATP5EP56381 51 aaPredicted RBP0.5□□□□□ -2.33
CCDC39-206ENST00000489868 UBE2L3P68036 154 aaKnown RBP0.5□□□□□ -2.33
CCDC39-206ENST00000489868 DCDP81605 110 aaKnown RBP0.5□□□□□ -2.33
CCDC39-206ENST00000489868 Q0VG73 95 aa0.5□□□□□ -2.33
CCDC39-206ENST00000489868 ESRGQ1W209 222 aa0.5□□□□□ -2.33
CCDC39-206ENST00000489868 Q5BKY6 102 aa0.5□□□□□ -2.33
CCDC39-206ENST00000489868 C12orf73Q69YU5 71 aa0.5□□□□□ -2.33
CCDC39-206ENST00000489868 UNQ5815/PRO19632Q6UWF5 114 aa0.5□□□□□ -2.33
CCDC39-206ENST00000489868 ATP11AUNQ6ZP68 121 aa0.5□□□□□ -2.33
CCDC39-206ENST00000489868 ARL17AQ8IVW1 177 aa0.5□□□□□ -2.33
CCDC39-206ENST00000489868 LINC00301Q8NCQ3 95 aa0.5□□□□□ -2.33
CCDC39-206ENST00000489868 ATP6V0E2Q8NHE4 81 aa0.5□□□□□ -2.33
CCDC39-206ENST00000489868 PFN4Q8NHR9 129 aa0.5□□□□□ -2.33
CCDC39-206ENST00000489868 VSTM2AQ8TAG5 236 aa0.5□□□□□ -2.33
CCDC39-206ENST00000489868 TSKUQ8WUA8 353 aa0.5□□□□□ -2.33
CCDC39-206ENST00000489868 C10orf82Q8WW14 230 aa0.5□□□□□ -2.33
CCDC39-206ENST00000489868 S100ZQ8WXG8 99 aa0.5□□□□□ -2.33
CCDC39-206ENST00000489868 TSLPQ969D9 159 aa0.5□□□□□ -2.33
CCDC39-206ENST00000489868 POP5Q969H6 163 aaKnown RBP0.5□□□□□ -2.33
CCDC39-206ENST00000489868 NABP2Q9BQ15 211 aa0.5□□□□□ -2.33
CCDC39-206ENST00000489868 SMIM7Q9BQ49 75 aa0.5□□□□□ -2.33
CCDC39-206ENST00000489868 PMCHL2Q9BQD1 86 aa0.5□□□□□ -2.33
CCDC39-206ENST00000489868 LINC00467Q9BRT7 94 aa0.5□□□□□ -2.33
CCDC39-206ENST00000489868 SLC50A1Q9BRV3 221 aa0.5□□□□□ -2.33
CCDC39-206ENST00000489868 CST11Q9H112 138 aa0.5□□□□□ -2.33
CCDC39-206ENST00000489868 DPH3P1Q9H4G8 78 aa0.5□□□□□ -2.33
CCDC39-206ENST00000489868 SMCO4Q9NRQ5 59 aa0.5□□□□□ -2.33
CCDC39-206ENST00000489868 TMEM242Q9NWH2 141 aa0.5□□□□□ -2.33
CCDC39-206ENST00000489868 NHP2Q9NX24 153 aaKnown RBP0.5□□□□□ -2.33
CCDC39-206ENST00000489868 UQCR10Q9UDW1 63 aa0.5□□□□□ -2.33
CCDC39-206ENST00000489868 LY96Q9Y6Y9 160 aa0.5□□□□□ -2.33
CCDC39-206ENST00000489868 NALCNQ8IZF0 1738 aa0.5□□□□□ -2.33
CCDC39-206ENST00000489868 KDM5CP41229 1560 aa0.49□□□□□ -2.33
CCDC39-206ENST00000489868 MED1Q15648 1581 aaPredicted RBP0.49□□□□□ -2.33
CCDC39-206ENST00000489868 TOPBP1Q92547 1522 aa0.49□□□□□ -2.33
CCDC39-206ENST00000489868 CCDC141Q6ZP82 1450 aa0.49□□□□□ -2.33
CCDC39-206ENST00000489868 MAGI2Q86UL8 1455 aa0.49□□□□□ -2.33
CCDC39-206ENST00000489868 IFT140Q96RY7 1462 aa0.49□□□□□ -2.33
CCDC39-206ENST00000489868 FYCO1Q9BQS8 1478 aa0.49□□□□□ -2.33
CCDC39-206ENST00000489868 RIC1Q4ADV7 1423 aa0.49□□□□□ -2.33
CCDC39-206ENST00000489868 C10orf71Q711Q0 1435 aa0.49□□□□□ -2.33
CCDC39-206ENST00000489868 TRAV14DV4A0A0A6YYC5 116 aa0.49□□□□□ -2.33
CCDC39-206ENST00000489868 TRAV3A0A0B4J244 114 aa0.49□□□□□ -2.33
CCDC39-206ENST00000489868 TRAV1-1A0A0B4J248 108 aa0.49□□□□□ -2.33
CCDC39-206ENST00000489868 TRAV17A0A0B4J275 112 aa0.49□□□□□ -2.33
CCDC39-206ENST00000489868 TRBV7-7A0A0K0K1E9 115 aa0.49□□□□□ -2.33
CCDC39-206ENST00000489868 hADV29S1A0JD25 119 aa0.49□□□□□ -2.33
CCDC39-206ENST00000489868 hDV103S1A0JD37 113 aa0.49□□□□□ -2.33
CCDC39-206ENST00000489868 IGLC7A0M8Q6 106 aa0.49□□□□□ -2.33
CCDC39-206ENST00000489868 A6NIN4 97 aa0.49□□□□□ -2.33
CCDC39-206ENST00000489868 A6NN06 94 aa0.49□□□□□ -2.33
CCDC39-206ENST00000489868 B4DSR2 109 aa0.49□□□□□ -2.33
CCDC39-206ENST00000489868 C17orf112F2Z3M2 114 aa0.49□□□□□ -2.33
CCDC39-206ENST00000489868 M0R233 179 aa0.49□□□□□ -2.33
CCDC39-206ENST00000489868 ATOX1O00244 68 aa0.49□□□□□ -2.33
CCDC39-206ENST00000489868 NUPR1O60356 82 aa0.49□□□□□ -2.33
CCDC39-206ENST00000489868 IGKCP01834 107 aa0.49□□□□□ -2.33
CCDC39-206ENST00000489868 CLPSP04118 112 aa0.49□□□□□ -2.33
CCDC39-206ENST00000489868 PIRTP0C851 137 aa0.49□□□□□ -2.33
CCDC39-206ENST00000489868 MGST1P10620 155 aaKnown RBP0.49□□□□□ -2.33
CCDC39-206ENST00000489868 CBLN1P23435 193 aa0.49□□□□□ -2.33
CCDC39-206ENST00000489868 FAUP35544 74 aaKnown RBP0.49□□□□□ -2.33
CCDC39-206ENST00000489868 SSR2P43308 183 aa0.49□□□□□ -2.33
CCDC39-206ENST00000489868 POLR2JP52435 117 aaKnown RBP0.49□□□□□ -2.33
CCDC39-206ENST00000489868 FXYD2P54710 66 aa0.49□□□□□ -2.33
CCDC39-206ENST00000489868 ROMO1P60602 79 aa0.49□□□□□ -2.33
CCDC39-206ENST00000489868 GNGT1P63211 74 aa0.49□□□□□ -2.33
CCDC39-206ENST00000489868 SEC11AP67812 179 aa0.49□□□□□ -2.33
CCDC39-206ENST00000489868 CCL8P80075 99 aa0.49□□□□□ -2.33
CCDC39-206ENST00000489868 RBM3P98179 157 aaKnown RBP0.49□□□□□ -2.33
CCDC39-206ENST00000489868 INSL4Q14641 139 aa0.49□□□□□ -2.33
CCDC39-206ENST00000489868 RHOHQ15669 191 aa0.49□□□□□ -2.33
CCDC39-206ENST00000489868 ADIRFQ15847 76 aa0.49□□□□□ -2.33
CCDC39-206ENST00000489868 TDRG1Q3Y452 100 aa0.49□□□□□ -2.33
CCDC39-206ENST00000489868 ASB16-AS1Q495Z4 193 aa0.49□□□□□ -2.33
CCDC39-206ENST00000489868 SPRNQ5BIV9 151 aa0.49□□□□□ -2.33
CCDC39-206ENST00000489868 S100A7L2Q5SY68 101 aa0.49□□□□□ -2.33
CCDC39-206ENST00000489868 C1orf134Q5TEV5 83 aa0.49□□□□□ -2.33
CCDC39-206ENST00000489868 SPANXN1Q5VSR9 72 aa0.49□□□□□ -2.33
CCDC39-206ENST00000489868 RPL7L1Q6DKI1 246 aaKnown RBP0.49□□□□□ -2.33
CCDC39-206ENST00000489868 CASC2Q6XLA1 102 aa0.49□□□□□ -2.33
CCDC39-206ENST00000489868 LINC00299Q6ZSB3 139 aa0.49□□□□□ -2.33
CCDC39-206ENST00000489868 C5orf38Q86SI9 138 aa0.49□□□□□ -2.33
CCDC39-206ENST00000489868 SBSPONQ8IVN8 264 aa0.49□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms