RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 ZNF575Q86XF7 245 aa3.66□□□□□ -1.82
SNRNP40-206ENST00000489853 Q8NA96 180 aa3.66□□□□□ -1.82
SNRNP40-206ENST00000489853 KLHL30-AS1Q8NEE0 82 aa3.66□□□□□ -1.82
SNRNP40-206ENST00000489853 KLF14Q8TD94 323 aaPredicted RBP3.66□□□□□ -1.82
SNRNP40-206ENST00000489853 C2orf48Q96LS8 159 aa3.66□□□□□ -1.82
SNRNP40-206ENST00000489853 KLK5Q9Y337 293 aaPredicted RBP3.66□□□□□ -1.82
SNRNP40-206ENST00000489853 TPRP12270 2363 aaKnown RBP3.66□□□□□ -1.82
SNRNP40-206ENST00000489853 SPTBN2O15020 2390 aa3.65□□□□□ -1.82
SNRNP40-206ENST00000489853 CACNA1GO43497 2377 aa3.65□□□□□ -1.82
SNRNP40-206ENST00000489853 GPR179Q6PRD1 2367 aa3.65□□□□□ -1.82
SNRNP40-206ENST00000489853 FRYQ5TBA9 3013 aa3.65□□□□□ -1.82
SNRNP40-206ENST00000489853 ACACBO00763 2458 aa3.65□□□□□ -1.82
SNRNP40-206ENST00000489853 A0A1W2PR77 199 aa3.65□□□□□ -1.83
SNRNP40-206ENST00000489853 C17orf100A8MU93 164 aa3.65□□□□□ -1.83
SNRNP40-206ENST00000489853 F5H697 171 aa3.65□□□□□ -1.83
SNRNP40-206ENST00000489853 H7C423 109 aa3.65□□□□□ -1.83
SNRNP40-206ENST00000489853 CDX4O14627 284 aaPredicted RBP3.65□□□□□ -1.83
SNRNP40-206ENST00000489853 OVOL1O14753 267 aa3.65□□□□□ -1.83
SNRNP40-206ENST00000489853 IGHV4-39P01824 125 aa3.65□□□□□ -1.83
SNRNP40-206ENST00000489853 COX6A1P12074 109 aa3.65□□□□□ -1.83
SNRNP40-206ENST00000489853 WT1P19544 449 aaPredicted RBP3.65□□□□□ -1.83
SNRNP40-206ENST00000489853 CEMP1Q6PRD7 247 aaPredicted RBP3.65□□□□□ -1.83
SNRNP40-206ENST00000489853 ZNF833PQ6ZTB9 187 aa3.65□□□□□ -1.83
SNRNP40-206ENST00000489853 IL17RELQ6ZVW7 336 aa3.65□□□□□ -1.83
SNRNP40-206ENST00000489853 C5orf38Q86SI9 138 aa3.65□□□□□ -1.83
SNRNP40-206ENST00000489853 C17orf77Q96MU5 243 aa3.65□□□□□ -1.83
SNRNP40-206ENST00000489853 METTL26Q96S19 204 aa3.65□□□□□ -1.83
SNRNP40-206ENST00000489853 CTSZQ9UBR2 303 aa3.65□□□□□ -1.83
SNRNP40-206ENST00000489853 LINC00527Q9UJ94 153 aa3.65□□□□□ -1.83
SNRNP40-206ENST00000489853 ASXL3Q9C0F0 2248 aa3.65□□□□□ -1.83
SNRNP40-206ENST00000489853 BAHCC1Q9P281 2608 aa3.64□□□□□ -1.83
SNRNP40-206ENST00000489853 SRRM5B3KS81 715 aa3.64□□□□□ -1.83
SNRNP40-206ENST00000489853 C5orf67F2Z3F1 127 aa3.64□□□□□ -1.83
SNRNP40-206ENST00000489853 H3BRN7 92 aa3.64□□□□□ -1.83
SNRNP40-206ENST00000489853 COX6CP09669 75 aa3.64□□□□□ -1.83
SNRNP40-206ENST00000489853 CNTFRP26992 372 aa3.64□□□□□ -1.83
SNRNP40-206ENST00000489853 NXPH1P58417 271 aa3.64□□□□□ -1.83
SNRNP40-206ENST00000489853 C4orf26Q17RF5 130 aa3.64□□□□□ -1.83
SNRNP40-206ENST00000489853 RUSC1-AS1Q66K80 236 aa3.64□□□□□ -1.83
SNRNP40-206ENST00000489853 GUSBP11Q6P575 273 aa3.64□□□□□ -1.83
SNRNP40-206ENST00000489853 PRO0628Q9UI54 55 aa3.64□□□□□ -1.83
SNRNP40-206ENST00000489853 RPUSD1Q9UJJ7 312 aaKnown RBP3.64□□□□□ -1.83
SNRNP40-206ENST00000489853 M0R3E3 92 aa3.64□□□□□ -1.83
SNRNP40-206ENST00000489853 ATOX1O00244 68 aa3.64□□□□□ -1.83
SNRNP40-206ENST00000489853 TIMM8AO60220 97 aaPredicted RBP3.64□□□□□ -1.83
SNRNP40-206ENST00000489853 IGLV2-23P01705 113 aa3.64□□□□□ -1.83
SNRNP40-206ENST00000489853 ZNF22P17026 224 aaPredicted RBP3.64□□□□□ -1.83
SNRNP40-206ENST00000489853 ZNF80P51504 273 aaPredicted RBP3.64□□□□□ -1.83
SNRNP40-206ENST00000489853 Q1RN00 199 aa3.64□□□□□ -1.83
SNRNP40-206ENST00000489853 VMA21Q3ZAQ7 101 aa3.64□□□□□ -1.83
SNRNP40-206ENST00000489853 Q5XG85 94 aa3.64□□□□□ -1.83
SNRNP40-206ENST00000489853 HRCT1Q6UXD1 115 aa3.64□□□□□ -1.83
SNRNP40-206ENST00000489853 SDIM1Q6ZPB5 146 aa3.64□□□□□ -1.83
SNRNP40-206ENST00000489853 TMEM105Q8N8V8 129 aa3.64□□□□□ -1.83
SNRNP40-206ENST00000489853 ZNRF1Q8ND25 227 aa3.64□□□□□ -1.83
SNRNP40-206ENST00000489853 SMIM2Q9BVW6 85 aa3.64□□□□□ -1.83
SNRNP40-206ENST00000489853 OTOGLQ3ZCN5 2332 aa3.64□□□□□ -1.83
SNRNP40-206ENST00000489853 MAP1BP46821 2468 aaKnown RBP3.63□□□□□ -1.83
SNRNP40-206ENST00000489853 IGHV4-4A0A075B6R2 117 aa3.63□□□□□ -1.83
SNRNP40-206ENST00000489853 hADV29S1A0JD25 119 aa3.63□□□□□ -1.83
SNRNP40-206ENST00000489853 TMEM223A0PJW6 202 aa3.63□□□□□ -1.83
SNRNP40-206ENST00000489853 MBD3L5A6NJ08 208 aaPredicted RBP3.63□□□□□ -1.83
SNRNP40-206ENST00000489853 C11orf86A6NJI1 115 aa3.63□□□□□ -1.83
SNRNP40-206ENST00000489853 K7ENP7 123 aa3.63□□□□□ -1.83
SNRNP40-206ENST00000489853 TIRAPP58753 221 aa3.63□□□□□ -1.83
SNRNP40-206ENST00000489853 HIST1H4AP62805 103 aaKnown RBP3.63□□□□□ -1.83
SNRNP40-206ENST00000489853 C10orf55Q5SWW7 151 aa3.63□□□□□ -1.83
SNRNP40-206ENST00000489853 FAM201AQ5SY85 155 aa3.63□□□□□ -1.83
SNRNP40-206ENST00000489853 HCP5Q6MZN7 132 aa3.63□□□□□ -1.83
SNRNP40-206ENST00000489853 PIMREGQ9BSJ6 248 aa3.63□□□□□ -1.83
SNRNP40-206ENST00000489853 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.63□□□□□ -1.83
SNRNP40-206ENST00000489853 SETXQ7Z333 2677 aaKnown RBP3.63□□□□□ -1.83
SNRNP40-206ENST00000489853 H7C2G1 150 aa3.62□□□□□ -1.83
SNRNP40-206ENST00000489853 J3QQQ9 107 aa3.62□□□□□ -1.83
SNRNP40-206ENST00000489853 SPRY2O43597 315 aa3.62□□□□□ -1.83
SNRNP40-206ENST00000489853 TRIAP1O43715 76 aa3.62□□□□□ -1.83
SNRNP40-206ENST00000489853 LHBP01229 141 aa3.62□□□□□ -1.83
SNRNP40-206ENST00000489853 ZNF883P0CG24 379 aa3.62□□□□□ -1.83
SNRNP40-206ENST00000489853 LGALS3P17931 250 aaKnown RBP3.62□□□□□ -1.83
SNRNP40-206ENST00000489853 NBL1P41271 181 aa3.62□□□□□ -1.83
SNRNP40-206ENST00000489853 CCL8P80075 99 aa3.62□□□□□ -1.83
SNRNP40-206ENST00000489853 DUX4L9Q6RFH8 374 aaPredicted RBP3.62□□□□□ -1.83
SNRNP40-206ENST00000489853 C2orf66Q6UXQ4 117 aa3.62□□□□□ -1.83
SNRNP40-206ENST00000489853 MUSTN1Q8IVN3 82 aa3.62□□□□□ -1.83
SNRNP40-206ENST00000489853 FAM216BQ8N7L0 139 aa3.62□□□□□ -1.83
SNRNP40-206ENST00000489853 AMELXQ99217 191 aa3.62□□□□□ -1.83
SNRNP40-206ENST00000489853 SLC50A1Q9BRV3 221 aa3.62□□□□□ -1.83
SNRNP40-206ENST00000489853 JPT2Q9H910 190 aa3.62□□□□□ -1.83
SNRNP40-206ENST00000489853 PEMTQ9UBM1 199 aa3.62□□□□□ -1.83
SNRNP40-206ENST00000489853 ZFYVE26Q68DK2 2539 aa3.62□□□□□ -1.83
SNRNP40-206ENST00000489853 LAMA5O15230 3695 aa3.62□□□□□ -1.83
SNRNP40-206ENST00000489853 SMG1Q96Q15 3661 aaKnown RBP3.62□□□□□ -1.83
SNRNP40-206ENST00000489853 DOCK10Q96BY6 2186 aa3.62□□□□□ -1.83
SNRNP40-206ENST00000489853 IGLV4-69A0A075B6H9 119 aa3.62□□□□□ -1.83
SNRNP40-206ENST00000489853 IGKV2-40A0A087WW87 121 aaPredicted RBP3.62□□□□□ -1.83
SNRNP40-206ENST00000489853 IGHV3-21A0A0B4J1V1 117 aa3.62□□□□□ -1.83
SNRNP40-206ENST00000489853 TRAV13-1A0A0B4J241 112 aa3.62□□□□□ -1.83
SNRNP40-206ENST00000489853 PINLYPA6NC86 204 aa3.62□□□□□ -1.83
SNRNP40-206ENST00000489853 LST1O00453 97 aa3.62□□□□□ -1.83
SNRNP40-206ENST00000489853 IGKV1-17P01599 117 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms