RNA–Protein interactions for RNA: ENST00000489794.1

VPS26A-206, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3 BASIC

Gene VPS26A, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-206ENST00000489794 IFNGP01579 166 aa1.7□□□□□ -2.14
VPS26A-206ENST00000489794 IGLV3-1P01715 115 aa1.7□□□□□ -2.14
VPS26A-206ENST00000489794 TFF1P04155 84 aa1.7□□□□□ -2.14
VPS26A-206ENST00000489794 RHOHQ15669 191 aa1.7□□□□□ -2.14
VPS26A-206ENST00000489794 NAIPQ13075 1403 aa1.69□□□□□ -2.14
VPS26A-206ENST00000489794 IGKV2-40A0A087WW87 121 aaPredicted RBP1.69□□□□□ -2.14
VPS26A-206ENST00000489794 IGLV3-32A0A0A0MS00 114 aa1.69□□□□□ -2.14
VPS26A-206ENST00000489794 IGKV2D-40P01614 121 aaPredicted RBP1.69□□□□□ -2.14
VPS26A-206ENST00000489794 HIST1H1DP16402 221 aaKnown RBP1.69□□□□□ -2.14
VPS26A-206ENST00000489794 WHAMMP3Q1A5X7 153 aa1.69□□□□□ -2.14
VPS26A-206ENST00000489794 GDF5OSQ5U4N7 250 aa1.69□□□□□ -2.14
VPS26A-206ENST00000489794 LINC01545Q5VT33 79 aa1.69□□□□□ -2.14
VPS26A-206ENST00000489794 LYPD5Q6UWN5 251 aa1.69□□□□□ -2.14
VPS26A-206ENST00000489794 BCL9LQ86UU0 1499 aa1.69□□□□□ -2.14
VPS26A-206ENST00000489794 KMT2BQ9UMN6 2715 aaPredicted RBP1.68□□□□□ -2.14
VPS26A-206ENST00000489794 AKAP11Q9UKA4 1901 aa1.68□□□□□ -2.14
VPS26A-206ENST00000489794 A0A0J9YY99 117 aa1.68□□□□□ -2.14
VPS26A-206ENST00000489794 MIF4GDA9UHW6 222 aaKnown RBP1.68□□□□□ -2.14
VPS26A-206ENST00000489794 F6UZH7 168 aa1.68□□□□□ -2.14
VPS26A-206ENST00000489794 AKAIN1P0CW23 69 aa1.68□□□□□ -2.14
VPS26A-206ENST00000489794 IL9P15248 144 aa1.68□□□□□ -2.14
VPS26A-206ENST00000489794 S100A1P23297 94 aa1.68□□□□□ -2.14
VPS26A-206ENST00000489794 OCIAD2Q56VL3 154 aa1.68□□□□□ -2.14
VPS26A-206ENST00000489794 SNRNP25Q9BV90 132 aaKnown RBP1.68□□□□□ -2.14
VPS26A-206ENST00000489794 SEC11CQ9BY50 192 aa1.68□□□□□ -2.14
VPS26A-206ENST00000489794 PHRF1Q9P1Y6 1649 aaKnown RBP1.67□□□□□ -2.14
VPS26A-206ENST00000489794 TENM1Q9UKZ4 2725 aa1.67□□□□□ -2.14
VPS26A-206ENST00000489794 TRAV2A0A0B4J234 112 aa1.67□□□□□ -2.14
VPS26A-206ENST00000489794 NUPR2A6NF83 97 aa1.67□□□□□ -2.14
VPS26A-206ENST00000489794 CCDC179H3BU77 68 aa1.67□□□□□ -2.14
VPS26A-206ENST00000489794 IL5P05113 134 aa1.67□□□□□ -2.14
VPS26A-206ENST00000489794 PIRTP0C851 137 aa1.67□□□□□ -2.14
VPS26A-206ENST00000489794 FGF7P21781 194 aa1.67□□□□□ -2.14
VPS26A-206ENST00000489794 PLPP5Q8NEB5 264 aa1.67□□□□□ -2.14
VPS26A-206ENST00000489794 PPDPFLQ8WWR9 84 aa1.67□□□□□ -2.14
VPS26A-206ENST00000489794 COPS9Q8WXC6 57 aa1.67□□□□□ -2.14
VPS26A-206ENST00000489794 TMEM242Q9NWH2 141 aa1.67□□□□□ -2.14
VPS26A-206ENST00000489794 SCN3BQ9NY72 215 aa1.67□□□□□ -2.14
VPS26A-206ENST00000489794 MRPL36Q9P0J6 103 aaKnown RBP1.67□□□□□ -2.14
VPS26A-206ENST00000489794 ATG2AQ2TAZ0 1938 aa1.67□□□□□ -2.14
VPS26A-206ENST00000489794 ZGRF1Q86YA3 2104 aa1.67□□□□□ -2.14
VPS26A-206ENST00000489794 CTTNBP2Q8WZ74 1663 aa1.67□□□□□ -2.14
VPS26A-206ENST00000489794 FCGBPQ9Y6R7 5405 aaPredicted RBP1.67□□□□□ -2.14
VPS26A-206ENST00000489794 TET1Q8NFU7 2136 aa1.66□□□□□ -2.14
VPS26A-206ENST00000489794 SNAPC5O75971 98 aa1.66□□□□□ -2.14
VPS26A-206ENST00000489794 GYPBP06028 91 aa1.66□□□□□ -2.14
VPS26A-206ENST00000489794 SLC25A6P12236 298 aa1.66□□□□□ -2.14
VPS26A-206ENST00000489794 PDE6GP18545 87 aa1.66□□□□□ -2.14
VPS26A-206ENST00000489794 S100PP25815 95 aa1.66□□□□□ -2.14
VPS26A-206ENST00000489794 SPATA45Q537H7 98 aa1.66□□□□□ -2.14
VPS26A-206ENST00000489794 OR2T2Q6IF00 324 aa1.66□□□□□ -2.14
VPS26A-206ENST00000489794 SPTSSAQ969W0 71 aa1.66□□□□□ -2.14
VPS26A-206ENST00000489794 AGPAT4-IT1Q9H0P7 198 aa1.66□□□□□ -2.14
VPS26A-206ENST00000489794 NDUFA12Q9UI09 145 aa1.66□□□□□ -2.14
VPS26A-206ENST00000489794 BOKQ9UMX3 212 aaPredicted RBP1.66□□□□□ -2.14
VPS26A-206ENST00000489794 PLXNA2O75051 1894 aa1.66□□□□□ -2.14
VPS26A-206ENST00000489794 FLG2Q5D862 2391 aaPredicted RBP1.66□□□□□ -2.14
VPS26A-206ENST00000489794 FAM135AQ9P2D6 1515 aa1.66□□□□□ -2.14
VPS26A-206ENST00000489794 RIMS1Q86UR5 1692 aaKnown RBP1.65□□□□□ -2.15
VPS26A-206ENST00000489794 CFTRP13569 1480 aa1.65□□□□□ -2.15
VPS26A-206ENST00000489794 IGHV3-30P01768 117 aa1.65□□□□□ -2.15
VPS26A-206ENST00000489794 IGHV3-30-5P0DP03 117 aa1.65□□□□□ -2.15
VPS26A-206ENST00000489794 RPL37AP61513 92 aaKnown RBP1.65□□□□□ -2.15
VPS26A-206ENST00000489794 SPANXN1Q5VSR9 72 aa1.65□□□□□ -2.15
VPS26A-206ENST00000489794 PP6455Q8WZ26 134 aa1.65□□□□□ -2.15
VPS26A-206ENST00000489794 DMAC1Q96GE9 116 aa1.65□□□□□ -2.15
VPS26A-206ENST00000489794 ODF3Q96PU9 254 aa1.65□□□□□ -2.15
VPS26A-206ENST00000489794 ATG5Q9H1Y0 275 aa1.65□□□□□ -2.15
VPS26A-206ENST00000489794 E9PCH4 1651 aa1.64□□□□□ -2.15
VPS26A-206ENST00000489794 TRBV10-1A0A0K0K1A3 114 aa1.64□□□□□ -2.15
VPS26A-206ENST00000489794 CORTO00230 105 aa1.64□□□□□ -2.15
VPS26A-206ENST00000489794 SNCGO76070 127 aa1.64□□□□□ -2.15
VPS26A-206ENST00000489794 RERGLQ9H628 205 aa1.64□□□□□ -2.15
VPS26A-206ENST00000489794 C22orf24Q9Y442 160 aa1.64□□□□□ -2.15
VPS26A-206ENST00000489794 CACNA1BQ00975 2339 aa1.64□□□□□ -2.15
VPS26A-206ENST00000489794 CUL7Q14999 1698 aa1.64□□□□□ -2.15
VPS26A-206ENST00000489794 PTPRMP28827 1452 aa1.63□□□□□ -2.15
VPS26A-206ENST00000489794 CDK12Q9NYV4 1490 aaPredicted RBP1.63□□□□□ -2.15
VPS26A-206ENST00000489794 CXorf51AA0A1B0GTR3 108 aa1.63□□□□□ -2.15
VPS26A-206ENST00000489794 ATP6V1G2-DDX39BF2Z307 99 aa1.63□□□□□ -2.15
VPS26A-206ENST00000489794 NDUFB6O95139 128 aa1.63□□□□□ -2.15
VPS26A-206ENST00000489794 PIPP12273 146 aaPredicted RBP1.63□□□□□ -2.15
VPS26A-206ENST00000489794 BTG2P78543 158 aa1.63□□□□□ -2.15
VPS26A-206ENST00000489794 S100A7L2Q5SY68 101 aa1.63□□□□□ -2.15
VPS26A-206ENST00000489794 SBSPONQ8IVN8 264 aa1.63□□□□□ -2.15
VPS26A-206ENST00000489794 LSM10Q969L4 123 aaKnown RBP1.63□□□□□ -2.15
VPS26A-206ENST00000489794 LINC00526Q96FQ7 95 aa1.63□□□□□ -2.15
VPS26A-206ENST00000489794 C12orf57Q99622 126 aa1.63□□□□□ -2.15
VPS26A-206ENST00000489794 MRPL57Q9BQC6 102 aaKnown RBP1.63□□□□□ -2.15
VPS26A-206ENST00000489794 NAA60Q9H7X0 242 aa1.63□□□□□ -2.15
VPS26A-206ENST00000489794 SERP1Q9Y6X1 66 aa1.63□□□□□ -2.15
VPS26A-206ENST00000489794 ZNF518AQ6AHZ1 1483 aa1.63□□□□□ -2.15
VPS26A-206ENST00000489794 MRPS10P82664 201 aaKnown RBP1.62□□□□□ -2.15
VPS26A-206ENST00000489794 SLC48A1Q6P1K1 146 aa1.62□□□□□ -2.15
VPS26A-206ENST00000489794 C10orf105Q8TEF2 133 aa1.62□□□□□ -2.15
VPS26A-206ENST00000489794 SNRNP200O75643 2136 aaKnown RBP1.61□□□□□ -2.15
VPS26A-206ENST00000489794 BCORL1Q5H9F3 1711 aa1.61□□□□□ -2.15
VPS26A-206ENST00000489794 MCRIP1C9JLW8 97 aa1.61□□□□□ -2.15
VPS26A-206ENST00000489794 CCKP06307 115 aa1.61□□□□□ -2.15
VPS26A-206ENST00000489794 LYNX1P0DP58 116 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms