RNA–Protein interactions for RNA: ENST00000489719.1

ABCF3-217, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-217ENST00000489719 A0A1B0GV50 99 aa12.21□□□□□ -0.45
ABCF3-217ENST00000489719 H2AFB1P0C5Y9 115 aa12.21□□□□□ -0.45
ABCF3-217ENST00000489719 MED14OSP0DP75 135 aa12.21□□□□□ -0.45
ABCF3-217ENST00000489719 TPT1P13693 172 aaKnown RBP12.21□□□□□ -0.45
ABCF3-217ENST00000489719 AKR1C3P42330 323 aa12.21□□□□□ -0.45
ABCF3-217ENST00000489719 ZNF506Q5JVG8 444 aa12.21□□□□□ -0.45
ABCF3-217ENST00000489719 IGHV3-73A0A0B4J1V6 119 aa12.2□□□□□ -0.46
ABCF3-217ENST00000489719 TRBV6-1A0A0K0K1D8 114 aa12.2□□□□□ -0.46
ABCF3-217ENST00000489719 LOC100131303A0A0U1RQF7 123 aa12.2□□□□□ -0.46
ABCF3-217ENST00000489719 S100A9P06702 114 aaKnown RBP12.2□□□□□ -0.46
ABCF3-217ENST00000489719 CRIP1P50238 77 aa12.2□□□□□ -0.46
ABCF3-217ENST00000489719 LGALSLQ3ZCW2 172 aaPredicted RBP12.2□□□□□ -0.46
ABCF3-217ENST00000489719 FAM162BQ5T6X4 162 aa12.2□□□□□ -0.46
ABCF3-217ENST00000489719 SLC25A29Q8N8R3 303 aa12.2□□□□□ -0.46
ABCF3-217ENST00000489719 ZC2HC1AQ96GY0 325 aa12.2□□□□□ -0.46
ABCF3-217ENST00000489719 TRBV6-4A0A1B0GX49 114 aa12.19□□□□□ -0.46
ABCF3-217ENST00000489719 EIF5AL1Q6IS14 154 aaKnown RBP12.19□□□□□ -0.46
ABCF3-217ENST00000489719 COX8CQ7Z4L0 72 aa12.19□□□□□ -0.46
ABCF3-217ENST00000489719 LY96Q9Y6Y9 160 aa12.19□□□□□ -0.46
ABCF3-217ENST00000489719 PKD1P98161 4303 aa12.18□□□□□ -0.46
ABCF3-217ENST00000489719 A8MWV9 139 aa12.18□□□□□ -0.46
ABCF3-217ENST00000489719 KRBOX1C9JBD0 128 aa12.18□□□□□ -0.46
ABCF3-217ENST00000489719 M0R036 132 aa12.18□□□□□ -0.46
ABCF3-217ENST00000489719 SH2D1AO60880 128 aa12.18□□□□□ -0.46
ABCF3-217ENST00000489719 LTAP01374 205 aa12.18□□□□□ -0.46
ABCF3-217ENST00000489719 EVI2AP22794 236 aa12.18□□□□□ -0.46
ABCF3-217ENST00000489719 LINC00315P59091 139 aa12.18□□□□□ -0.46
ABCF3-217ENST00000489719 RHOHQ15669 191 aa12.18□□□□□ -0.46
ABCF3-217ENST00000489719 PIK3CD-AS1Q5SR53 167 aa12.18□□□□□ -0.46
ABCF3-217ENST00000489719 IL36BQ9NZH7 164 aa12.18□□□□□ -0.46
ABCF3-217ENST00000489719 MGST1P10620 155 aaKnown RBP12.17□□□□□ -0.46
ABCF3-217ENST00000489719 ZNF575Q86XF7 245 aa12.17□□□□□ -0.46
ABCF3-217ENST00000489719 SYT8Q8NBV8 401 aa12.17□□□□□ -0.46
ABCF3-217ENST00000489719 GRIFINA4D1Z8 144 aa12.16□□□□□ -0.46
ABCF3-217ENST00000489719 C16orf90A8MZG2 172 aa12.16□□□□□ -0.46
ABCF3-217ENST00000489719 H3BVH4 76 aa12.16□□□□□ -0.46
ABCF3-217ENST00000489719 K7EP13 123 aa12.16□□□□□ -0.46
ABCF3-217ENST00000489719 ARMS2P0C7Q2 107 aa12.16□□□□□ -0.46
ABCF3-217ENST00000489719 RAB5CP51148 216 aa12.16□□□□□ -0.46
ABCF3-217ENST00000489719 ZNF674Q2M3X9 581 aa12.16□□□□□ -0.46
ABCF3-217ENST00000489719 NFE4Q86UQ8 179 aa12.16□□□□□ -0.46
ABCF3-217ENST00000489719 TMSB15BA0A087X1C1 80 aa12.15□□□□□ -0.46
ABCF3-217ENST00000489719 TEX46H3BTG2 121 aa12.15□□□□□ -0.46
ABCF3-217ENST00000489719 TIRAPP58753 221 aa12.15□□□□□ -0.46
ABCF3-217ENST00000489719 DNLZQ5SXM8 178 aa12.15□□□□□ -0.46
ABCF3-217ENST00000489719 ZFP2Q6ZN57 461 aa12.15□□□□□ -0.46
ABCF3-217ENST00000489719 BAGE2Q86Y30 109 aa12.15□□□□□ -0.46
ABCF3-217ENST00000489719 WFDC10BQ8IUB3 73 aa12.15□□□□□ -0.46
ABCF3-217ENST00000489719 TCTE3Q8IZS6 198 aa12.15□□□□□ -0.46
ABCF3-217ENST00000489719 PHLDA3Q9Y5J5 127 aa12.15□□□□□ -0.46
ABCF3-217ENST00000489719 TRAV8-6A0A0B4J262 113 aa12.14□□□□□ -0.47
ABCF3-217ENST00000489719 SCO2A0A1W2PP80 73 aa12.14□□□□□ -0.47
ABCF3-217ENST00000489719 DMRTA1Q5VZB9 504 aa12.14□□□□□ -0.47
ABCF3-217ENST00000489719 PARLQ9H300 379 aa12.14□□□□□ -0.47
ABCF3-217ENST00000489719 BOLA1Q9Y3E2 137 aa12.14□□□□□ -0.47
ABCF3-217ENST00000489719 HERC2O95714 4834 aa12.14□□□□□ -0.47
ABCF3-217ENST00000489719 DNAH11Q96DT5 4516 aa12.13□□□□□ -0.47
ABCF3-217ENST00000489719 DNAH10OSP0CZ25 163 aa12.13□□□□□ -0.47
ABCF3-217ENST00000489719 LINC01559Q495D7 138 aa12.13□□□□□ -0.47
ABCF3-217ENST00000489719 SPATA12Q7Z6I5 190 aa12.13□□□□□ -0.47
ABCF3-217ENST00000489719 ATP6V0E2Q8NHE4 81 aa12.13□□□□□ -0.47
ABCF3-217ENST00000489719 GNG13Q9P2W3 67 aa12.13□□□□□ -0.47
ABCF3-217ENST00000489719 TNFRSF18Q9Y5U5 241 aa12.13□□□□□ -0.47
ABCF3-217ENST00000489719 DYNC1H1Q14204 4646 aaKnown RBP12.12□□□□□ -0.47
ABCF3-217ENST00000489719 KIAA1109Q2LD37 5005 aa12.12□□□□□ -0.47
ABCF3-217ENST00000489719 EREGO14944 169 aa12.12□□□□□ -0.47
ABCF3-217ENST00000489719 CRYGDP07320 174 aa12.12□□□□□ -0.47
ABCF3-217ENST00000489719 CCL20P78556 96 aa12.12□□□□□ -0.47
ABCF3-217ENST00000489719 OR10J3Q5JRS4 329 aa12.12□□□□□ -0.47
ABCF3-217ENST00000489719 C10orf126Q8N4M7 172 aa12.12□□□□□ -0.47
ABCF3-217ENST00000489719 JPT2Q9H910 190 aa12.12□□□□□ -0.47
ABCF3-217ENST00000489719 MANBALQ9NQG1 85 aa12.12□□□□□ -0.47
ABCF3-217ENST00000489719 PKHD1P08F94 4074 aa12.11□□□□□ -0.47
ABCF3-217ENST00000489719 TRAV1-1A0A0B4J248 108 aa12.11□□□□□ -0.47
ABCF3-217ENST00000489719 IGHV3-38A0A0C4DH36 116 aa12.11□□□□□ -0.47
ABCF3-217ENST00000489719 Q6ZNX1 250 aa12.11□□□□□ -0.47
ABCF3-217ENST00000489719 Q6ZSN1 163 aa12.11□□□□□ -0.47
ABCF3-217ENST00000489719 SAMD10Q9BYL1 202 aa12.11□□□□□ -0.47
ABCF3-217ENST00000489719 GTSF1LQ9H1H1 148 aa12.11□□□□□ -0.47
ABCF3-217ENST00000489719 MSRB1Q9NZV6 116 aa12.11□□□□□ -0.47
ABCF3-217ENST00000489719 GAGE12JA6NER3 117 aa12.1□□□□□ -0.47
ABCF3-217ENST00000489719 M0R381 172 aa12.1□□□□□ -0.47
ABCF3-217ENST00000489719 RHODO00212 210 aa12.1□□□□□ -0.47
ABCF3-217ENST00000489719 C1QBP02746 253 aa12.1□□□□□ -0.47
ABCF3-217ENST00000489719 SULT1A2P50226 295 aa12.1□□□□□ -0.47
ABCF3-217ENST00000489719 GAGE1Q13065 139 aa12.1□□□□□ -0.47
ABCF3-217ENST00000489719 GAGE4Q13068 117 aa12.1□□□□□ -0.47
ABCF3-217ENST00000489719 GAGE5Q13069 117 aa12.1□□□□□ -0.47
ABCF3-217ENST00000489719 GAGE13Q4V321 117 aa12.1□□□□□ -0.47
ABCF3-217ENST00000489719 Q6ZRN7 208 aaPredicted RBP12.1□□□□□ -0.47
ABCF3-217ENST00000489719 SLC51BQ86UW2 128 aa12.1□□□□□ -0.47
ABCF3-217ENST00000489719 ZFP82Q8N141 532 aa12.1□□□□□ -0.47
ABCF3-217ENST00000489719 MLST8Q9BVC4 326 aa12.1□□□□□ -0.47
ABCF3-217ENST00000489719 SCRT2Q9NQ03 307 aa12.1□□□□□ -0.47
ABCF3-217ENST00000489719 LELP1Q5T871 98 aa12.09□□□□□ -0.47
ABCF3-217ENST00000489719 FAM74A4Q5TZK3 123 aa12.09□□□□□ -0.47
ABCF3-217ENST00000489719 SFRP2Q96HF1 295 aa12.09□□□□□ -0.47
ABCF3-217ENST00000489719 RPL35P42766 123 aaKnown RBP12.08□□□□□ -0.48
ABCF3-217ENST00000489719 PRR27Q6MZM9 219 aa12.08□□□□□ -0.48
ABCF3-217ENST00000489719 UFSP1Q6NVU6 142 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 176.5 ms