RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 SMIM6P0DI80 62 aa5.14□□□□□ -1.59
EXOSC3-206ENST00000489414 HOXA5P20719 270 aa5.14□□□□□ -1.59
EXOSC3-206ENST00000489414 CBLN1P23435 193 aa5.14□□□□□ -1.59
EXOSC3-206ENST00000489414 MEOX2P50222 304 aa5.14□□□□□ -1.59
EXOSC3-206ENST00000489414 GNG5P63218 68 aa5.14□□□□□ -1.59
EXOSC3-206ENST00000489414 USF2Q15853 346 aaPredicted RBP5.14□□□□□ -1.59
EXOSC3-206ENST00000489414 ACTL10Q5JWF8 245 aa5.14□□□□□ -1.59
EXOSC3-206ENST00000489414 FAM209BQ5JX69 171 aa5.14□□□□□ -1.59
EXOSC3-206ENST00000489414 PRR27Q6MZM9 219 aa5.14□□□□□ -1.59
EXOSC3-206ENST00000489414 LINC00518Q8N0U6 118 aa5.14□□□□□ -1.59
EXOSC3-206ENST00000489414 ARL6IP6Q8N6S5 226 aa5.14□□□□□ -1.59
EXOSC3-206ENST00000489414 GRAMD2BQ96HH9 432 aa5.14□□□□□ -1.59
EXOSC3-206ENST00000489414 USMG5Q96IX5 58 aa5.14□□□□□ -1.59
EXOSC3-206ENST00000489414 METTL26Q96S19 204 aa5.14□□□□□ -1.59
EXOSC3-206ENST00000489414 ZFP30Q9Y2G7 519 aa5.14□□□□□ -1.59
EXOSC3-206ENST00000489414 LINC00588Q9Y4M8 146 aa5.14□□□□□ -1.59
EXOSC3-206ENST00000489414 KLF12Q9Y4X4 402 aa5.14□□□□□ -1.59
EXOSC3-206ENST00000489414 V9GYV3 84 aa5.14□□□□□ -1.59
EXOSC3-206ENST00000489414 X6R8D5 127 aa5.14□□□□□ -1.59
EXOSC3-206ENST00000489414 TRAV25A0A0B4J276 109 aa5.13□□□□□ -1.59
EXOSC3-206ENST00000489414 TRBV6-1A0A0K0K1D8 114 aa5.13□□□□□ -1.59
EXOSC3-206ENST00000489414 XKRY2A2RUG3 117 aa5.13□□□□□ -1.59
EXOSC3-206ENST00000489414 A8MWL6 223 aa5.13□□□□□ -1.59
EXOSC3-206ENST00000489414 H3BTX0 84 aa5.13□□□□□ -1.59
EXOSC3-206ENST00000489414 ZNF253O75346 499 aa5.13□□□□□ -1.59
EXOSC3-206ENST00000489414 LTAP01374 205 aa5.13□□□□□ -1.59
EXOSC3-206ENST00000489414 IGLV2-8P01709 118 aa5.13□□□□□ -1.59
EXOSC3-206ENST00000489414 SNRPCP09234 159 aaKnown RBP5.13□□□□□ -1.59
EXOSC3-206ENST00000489414 CT45A10P0DMU9 189 aa5.13□□□□□ -1.59
EXOSC3-206ENST00000489414 IGLC2P0DOY2 106 aa5.13□□□□□ -1.59
EXOSC3-206ENST00000489414 RAB4BP61018 213 aa5.13□□□□□ -1.59
EXOSC3-206ENST00000489414 C1orf194Q5T5A4 169 aa5.13□□□□□ -1.59
EXOSC3-206ENST00000489414 RASL11AQ6T310 242 aa5.13□□□□□ -1.59
EXOSC3-206ENST00000489414 CLEC19AQ6UXS0 136 aa5.13□□□□□ -1.59
EXOSC3-206ENST00000489414 GOLT1AQ6ZVE7 132 aa5.13□□□□□ -1.59
EXOSC3-206ENST00000489414 PRNTQ86SH4 94 aa5.13□□□□□ -1.59
EXOSC3-206ENST00000489414 GBGT1Q8N5D6 347 aa5.13□□□□□ -1.59
EXOSC3-206ENST00000489414 TMEM75Q8N9X5 138 aa5.13□□□□□ -1.59
EXOSC3-206ENST00000489414 NHLRC2Q8NBF2 726 aa5.13□□□□□ -1.59
EXOSC3-206ENST00000489414 ZNF414Q96IQ9 312 aa5.13□□□□□ -1.59
EXOSC3-206ENST00000489414 LINC00479Q96M42 142 aa5.13□□□□□ -1.59
EXOSC3-206ENST00000489414 C12orf57Q99622 126 aa5.13□□□□□ -1.59
EXOSC3-206ENST00000489414 RNASE7Q9H1E1 156 aaKnown RBP5.13□□□□□ -1.59
EXOSC3-206ENST00000489414 ZNF331Q9NQX6 463 aaPredicted RBP5.13□□□□□ -1.59
EXOSC3-206ENST00000489414 ZNF492Q9P255 531 aa5.13□□□□□ -1.59
EXOSC3-206ENST00000489414 SMIM27A0A1W2PRY6 76 aa5.12□□□□□ -1.59
EXOSC3-206ENST00000489414 HLA-DQA1P01909 254 aa5.12□□□□□ -1.59
EXOSC3-206ENST00000489414 PSG3Q16557 428 aa5.12□□□□□ -1.59
EXOSC3-206ENST00000489414 CT83Q5H943 113 aa5.12□□□□□ -1.59
EXOSC3-206ENST00000489414 KRTAP5-3Q6L8H2 238 aa5.12□□□□□ -1.59
EXOSC3-206ENST00000489414 MORN3Q6PF18 240 aaPredicted RBP5.12□□□□□ -1.59
EXOSC3-206ENST00000489414 TOMM20LQ6UXN7 152 aa5.12□□□□□ -1.59
EXOSC3-206ENST00000489414 SIGLEC15Q6ZMC9 328 aa5.12□□□□□ -1.59
EXOSC3-206ENST00000489414 Q86TA4 180 aa5.12□□□□□ -1.59
EXOSC3-206ENST00000489414 TMEM183AQ8IXX5 376 aa5.12□□□□□ -1.59
EXOSC3-206ENST00000489414 EXOC3-AS1Q8N2X6 119 aa5.12□□□□□ -1.59
EXOSC3-206ENST00000489414 NUDT10Q8NFP7 164 aa5.12□□□□□ -1.59
EXOSC3-206ENST00000489414 OR4B1Q8NGF8 309 aa5.12□□□□□ -1.59
EXOSC3-206ENST00000489414 TSKUQ8WUA8 353 aa5.12□□□□□ -1.59
EXOSC3-206ENST00000489414 NUDT11Q96G61 164 aa5.12□□□□□ -1.59
EXOSC3-206ENST00000489414 SPAG8Q99932 426 aaPredicted RBP5.12□□□□□ -1.59
EXOSC3-206ENST00000489414 SLC50A1Q9BRV3 221 aa5.12□□□□□ -1.59
EXOSC3-206ENST00000489414 NDFIP1Q9BT67 221 aa5.12□□□□□ -1.59
EXOSC3-206ENST00000489414 GNB1LQ9BYB4 327 aa5.12□□□□□ -1.59
EXOSC3-206ENST00000489414 RPP21Q9H633 154 aaKnown RBP5.12□□□□□ -1.59
EXOSC3-206ENST00000489414 NAT8BQ9UHF3 227 aa5.12□□□□□ -1.59
EXOSC3-206ENST00000489414 IGLV5-52A0A0A0MRZ9 124 aa5.11□□□□□ -1.59
EXOSC3-206ENST00000489414 SNURFLB1AK76 121 aa5.11□□□□□ -1.59
EXOSC3-206ENST00000489414 DIRC3C9JPN6 131 aa5.11□□□□□ -1.59
EXOSC3-206ENST00000489414 ARL3P36405 182 aa5.11□□□□□ -1.59
EXOSC3-206ENST00000489414 TCL1AP56279 114 aa5.11□□□□□ -1.59
EXOSC3-206ENST00000489414 SAPCD1Q5SSQ6 148 aa5.11□□□□□ -1.59
EXOSC3-206ENST00000489414 ATP5L2Q7Z4Y8 100 aa5.11□□□□□ -1.59
EXOSC3-206ENST00000489414 HIST3H2BBQ8N257 126 aa5.11□□□□□ -1.59
EXOSC3-206ENST00000489414 TMEM18Q96B42 140 aa5.11□□□□□ -1.59
EXOSC3-206ENST00000489414 BORCS7Q96B45 105 aa5.11□□□□□ -1.59
EXOSC3-206ENST00000489414 CLEC5AQ9NY25 188 aa5.11□□□□□ -1.59
EXOSC3-206ENST00000489414 U3KQE9 123 aa5.11□□□□□ -1.59
EXOSC3-206ENST00000489414 A0A087X0K7 114 aa5.1□□□□□ -1.59
EXOSC3-206ENST00000489414 IGHV3-35A0A0C4DH35 117 aa5.1□□□□□ -1.59
EXOSC3-206ENST00000489414 A0A1W2PS18 150 aa5.1□□□□□ -1.59
EXOSC3-206ENST00000489414 TMEM213A2RRL7 107 aa5.1□□□□□ -1.59
EXOSC3-206ENST00000489414 FAM231BA6NCW3 169 aa5.1□□□□□ -1.59
EXOSC3-206ENST00000489414 NDUFA4O00483 81 aa5.1□□□□□ -1.59
EXOSC3-206ENST00000489414 PHOX2AO14813 284 aa5.1□□□□□ -1.59
EXOSC3-206ENST00000489414 MRPS12O15235 138 aaKnown RBP5.1□□□□□ -1.59
EXOSC3-206ENST00000489414 FABP4P15090 132 aa5.1□□□□□ -1.59
EXOSC3-206ENST00000489414 CRISP2P16562 243 aa5.1□□□□□ -1.59
EXOSC3-206ENST00000489414 CCL18P55774 89 aa5.1□□□□□ -1.59
EXOSC3-206ENST00000489414 PDZD11Q5EBL8 140 aa5.1□□□□□ -1.59
EXOSC3-206ENST00000489414 COA6Q5JTJ3 125 aaKnown RBP5.1□□□□□ -1.59
EXOSC3-206ENST00000489414 MRPL54Q6P161 138 aaKnown RBP5.1□□□□□ -1.59
EXOSC3-206ENST00000489414 Q6ZRU5 148 aa5.1□□□□□ -1.59
EXOSC3-206ENST00000489414 RBPMS2Q6ZRY4 209 aaKnown RBP5.1□□□□□ -1.59
EXOSC3-206ENST00000489414 APRG1Q8IVJ8 170 aa5.1□□□□□ -1.59
EXOSC3-206ENST00000489414 OR10D4PQ8NGN7 298 aa5.1□□□□□ -1.59
EXOSC3-206ENST00000489414 SGK494Q96LW2 274 aa5.1□□□□□ -1.59
EXOSC3-206ENST00000489414 MLST8Q9BVC4 326 aa5.1□□□□□ -1.59
EXOSC3-206ENST00000489414 GFRA4Q9GZZ7 299 aa5.1□□□□□ -1.59
EXOSC3-206ENST00000489414 PSG8Q9UQ74 426 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms