RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 CITO14578 2027 aa1.08□□□□□ -2.24
XRN1-213ENST00000489241 BICRAQ9NZM4 1560 aa1.08□□□□□ -2.24
XRN1-213ENST00000489241 MYH13Q9UKX3 1938 aa1.07□□□□□ -2.24
XRN1-213ENST00000489241 CDK12Q9NYV4 1490 aaPredicted RBP1.07□□□□□ -2.24
XRN1-213ENST00000489241 EML5Q05BV3 1969 aa1.07□□□□□ -2.24
XRN1-213ENST00000489241 ZNF670-ZNF695F2Z2N8 137 aa1.07□□□□□ -2.24
XRN1-213ENST00000489241 K7EIL1 84 aa1.07□□□□□ -2.24
XRN1-213ENST00000489241 CCKP06307 115 aa1.07□□□□□ -2.24
XRN1-213ENST00000489241 CCDC58Q4VC31 144 aa1.07□□□□□ -2.24
XRN1-213ENST00000489241 MIC13Q5XKP0 118 aa1.07□□□□□ -2.24
XRN1-213ENST00000489241 Q6ZS92 163 aa1.07□□□□□ -2.24
XRN1-213ENST00000489241 C5orf56Q8N8D9 126 aa1.07□□□□□ -2.24
XRN1-213ENST00000489241 SAR1AQ9NR31 198 aa1.07□□□□□ -2.24
XRN1-213ENST00000489241 ERG28Q9UKR5 140 aa1.07□□□□□ -2.24
XRN1-213ENST00000489241 PAIP2BQ9ULR5 123 aaKnown RBP1.07□□□□□ -2.24
XRN1-213ENST00000489241 LAMA4Q16363 1823 aa1.06□□□□□ -2.24
XRN1-213ENST00000489241 PITX3O75364 302 aa1.06□□□□□ -2.24
XRN1-213ENST00000489241 SLC25A6P12236 298 aa1.06□□□□□ -2.24
XRN1-213ENST00000489241 PRB3Q04118 309 aaPredicted RBP1.06□□□□□ -2.24
XRN1-213ENST00000489241 COPZ1P61923 177 aa1.05□□□□□ -2.24
XRN1-213ENST00000489241 SARNPP82979 210 aaKnown RBP1.05□□□□□ -2.24
XRN1-213ENST00000489241 ATOH7Q8N100 152 aa1.05□□□□□ -2.24
XRN1-213ENST00000489241 MYH6P13533 1939 aa1.05□□□□□ -2.24
XRN1-213ENST00000489241 SPTBP11277 2137 aa1.04□□□□□ -2.24
XRN1-213ENST00000489241 LINC01545Q5VT33 79 aa1.04□□□□□ -2.24
XRN1-213ENST00000489241 C10orf99Q6UWK7 81 aa1.04□□□□□ -2.24
XRN1-213ENST00000489241 VSTM2AQ8TAG5 236 aa1.04□□□□□ -2.24
XRN1-213ENST00000489241 PLAC4Q8WY50 150 aa1.04□□□□□ -2.24
XRN1-213ENST00000489241 VPS25Q9BRG1 176 aa1.04□□□□□ -2.24
XRN1-213ENST00000489241 PTPRMP28827 1452 aa1.04□□□□□ -2.24
XRN1-213ENST00000489241 ZNF56Q15929 161 aa1.03□□□□□ -2.24
XRN1-213ENST00000489241 Q6ZUT4 128 aa1.03□□□□□ -2.24
XRN1-213ENST00000489241 SDF2Q99470 211 aa1.03□□□□□ -2.24
XRN1-213ENST00000489241 ADGRB1O14514 1584 aa1.03□□□□□ -2.24
XRN1-213ENST00000489241 ATG2AQ2TAZ0 1938 aa1.03□□□□□ -2.25
XRN1-213ENST00000489241 FXYD1O00168 92 aa1.02□□□□□ -2.25
XRN1-213ENST00000489241 CASZ1Q86V15 1759 aa1.02□□□□□ -2.25
XRN1-213ENST00000489241 TSC22D3Q99576 134 aa1.02□□□□□ -2.25
XRN1-213ENST00000489241 ZDBF2Q9HCK1 2354 aa1.01□□□□□ -2.25
XRN1-213ENST00000489241 CCDC179H3BU77 68 aa1.01□□□□□ -2.25
XRN1-213ENST00000489241 PYYP10082 97 aa1.01□□□□□ -2.25
XRN1-213ENST00000489241 OR2T2Q6IF00 324 aa1.01□□□□□ -2.25
XRN1-213ENST00000489241 TMEM191AQ9H0A3 160 aa1.01□□□□□ -2.25
XRN1-213ENST00000489241 NDUFA12Q9UI09 145 aa1.01□□□□□ -2.25
XRN1-213ENST00000489241 BLMP54132 1417 aaPredicted RBP1□□□□□ -2.25
XRN1-213ENST00000489241 TEX49A0A1B0GTD5 131 aa1□□□□□ -2.25
XRN1-213ENST00000489241 LY6G6CO95867 125 aa1□□□□□ -2.25
XRN1-213ENST00000489241 APOC1P02654 83 aa1□□□□□ -2.25
XRN1-213ENST00000489241 SPINT3P49223 89 aa1□□□□□ -2.25
XRN1-213ENST00000489241 RRAS2P62070 204 aaPredicted RBP1□□□□□ -2.25
XRN1-213ENST00000489241 SPCS2Q15005 226 aa1□□□□□ -2.25
XRN1-213ENST00000489241 SCIMPQ6UWF3 145 aa1□□□□□ -2.25
XRN1-213ENST00000489241 NDUFA11Q86Y39 141 aa1□□□□□ -2.25
XRN1-213ENST00000489241 IFI27L1Q96BM0 104 aa1□□□□□ -2.25
XRN1-213ENST00000489241 PSMG3Q9BT73 122 aaPredicted RBP1□□□□□ -2.25
XRN1-213ENST00000489241 SPAG17Q6Q759 2223 aa1□□□□□ -2.25
XRN1-213ENST00000489241 PIRTP0C851 137 aa0.99□□□□□ -2.25
XRN1-213ENST00000489241 KLKP1Q107X0 134 aa0.99□□□□□ -2.25
XRN1-213ENST00000489241 TSKUQ8WUA8 353 aa0.99□□□□□ -2.25
XRN1-213ENST00000489241 MYOM3Q5VTT5 1437 aa0.98□□□□□ -2.25
XRN1-213ENST00000489241 K7EP13 123 aa0.98□□□□□ -2.25
XRN1-213ENST00000489241 GUCA1AP43080 201 aaPredicted RBP0.98□□□□□ -2.25
XRN1-213ENST00000489241 SPINK9Q5DT21 86 aa0.98□□□□□ -2.25
XRN1-213ENST00000489241 SPANXN1Q5VSR9 72 aa0.98□□□□□ -2.25
XRN1-213ENST00000489241 LINC00470Q9BZP3 86 aa0.98□□□□□ -2.25
XRN1-213ENST00000489241 KIF13AQ9H1H9 1805 aa0.98□□□□□ -2.25
XRN1-213ENST00000489241 GRIN2AQ12879 1464 aa0.98□□□□□ -2.25
XRN1-213ENST00000489241 MYH9P35579 1960 aaKnown RBP0.97□□□□□ -2.25
XRN1-213ENST00000489241 RREB1Q92766 1687 aa0.97□□□□□ -2.25
XRN1-213ENST00000489241 TMEM2Q9UHN6 1383 aa0.97□□□□□ -2.25
XRN1-213ENST00000489241 TCRBV3S1A0A5B6 114 aa0.97□□□□□ -2.25
XRN1-213ENST00000489241 GNG7O60262 68 aa0.97□□□□□ -2.25
XRN1-213ENST00000489241 NPC2P61916 151 aa0.97□□□□□ -2.25
XRN1-213ENST00000489241 SELENOWP63302 87 aa0.97□□□□□ -2.25
XRN1-213ENST00000489241 ARL11Q969Q4 196 aa0.97□□□□□ -2.25
XRN1-213ENST00000489241 DPH3Q96FX2 82 aa0.97□□□□□ -2.25
XRN1-213ENST00000489241 DLEC1Q9Y238 1755 aa0.96□□□□□ -2.26
XRN1-213ENST00000489241 MYH7P12883 1935 aa0.96□□□□□ -2.26
XRN1-213ENST00000489241 A0A0D9SG42 100 aa0.96□□□□□ -2.26
XRN1-213ENST00000489241 SPINK13Q1W4C9 94 aa0.96□□□□□ -2.26
XRN1-213ENST00000489241 SLC48A1Q6P1K1 146 aa0.96□□□□□ -2.26
XRN1-213ENST00000489241 KCNRGQ8N5I3 272 aa0.96□□□□□ -2.26
XRN1-213ENST00000489241 TMEM141Q96I45 108 aa0.96□□□□□ -2.26
XRN1-213ENST00000489241 TMEM14BQ9NUH8 114 aa0.96□□□□□ -2.26
XRN1-213ENST00000489241 TMEM242Q9NWH2 141 aa0.96□□□□□ -2.26
XRN1-213ENST00000489241 CCDC167Q9P0B6 97 aa0.96□□□□□ -2.26
XRN1-213ENST00000489241 IBTKQ9P2D0 1353 aaPredicted RBP0.96□□□□□ -2.26
XRN1-213ENST00000489241 PLXNA2O75051 1894 aa0.95□□□□□ -2.26
XRN1-213ENST00000489241 TRAV12-2A0A075B6T6 113 aa0.95□□□□□ -2.26
XRN1-213ENST00000489241 TRAV12-3A0A0B4J271 114 aa0.95□□□□□ -2.26
XRN1-213ENST00000489241 IL5P05113 134 aa0.95□□□□□ -2.26
XRN1-213ENST00000489241 ZNF137PP52743 207 aa0.95□□□□□ -2.26
XRN1-213ENST00000489241 RPL37P61927 97 aaKnown RBP0.95□□□□□ -2.26
XRN1-213ENST00000489241 EMX2Q04743 252 aa0.95□□□□□ -2.26
XRN1-213ENST00000489241 C6orf52Q5T4I8 152 aa0.95□□□□□ -2.26
XRN1-213ENST00000489241 CYP2G1PQ6ZSU1 146 aa0.95□□□□□ -2.26
XRN1-213ENST00000489241 ABCA4P78363 2273 aa0.95□□□□□ -2.26
XRN1-213ENST00000489241 AFDNP55196 1824 aaKnown RBP0.94□□□□□ -2.26
XRN1-213ENST00000489241 FAM25AB3EWG3 89 aa0.94□□□□□ -2.26
XRN1-213ENST00000489241 FAM25CB3EWG5 89 aa0.94□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms