RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 SLC17A3O00476 420 aa5.82□□□□□ -1.48
TRAPPC12-221ENST00000489032 AMBPP02760 352 aa5.82□□□□□ -1.48
TRAPPC12-221ENST00000489032 S100A9P06702 114 aaKnown RBP5.82□□□□□ -1.48
TRAPPC12-221ENST00000489032 HLA-DMBP28068 263 aa5.82□□□□□ -1.48
TRAPPC12-221ENST00000489032 RANP62826 216 aaKnown RBP5.82□□□□□ -1.48
TRAPPC12-221ENST00000489032 RPL23P62829 140 aaKnown RBP5.82□□□□□ -1.48
TRAPPC12-221ENST00000489032 DEFB135Q30KP9 77 aa5.82□□□□□ -1.48
TRAPPC12-221ENST00000489032 GDF5OSQ5U4N7 250 aa5.82□□□□□ -1.48
TRAPPC12-221ENST00000489032 CMTM2Q8TAZ6 248 aa5.82□□□□□ -1.48
TRAPPC12-221ENST00000489032 HIST1H2BAQ96A08 127 aa5.82□□□□□ -1.48
TRAPPC12-221ENST00000489032 FXYD5Q96DB9 178 aa5.82□□□□□ -1.48
TRAPPC12-221ENST00000489032 EDA2RQ9HAV5 297 aa5.82□□□□□ -1.48
TRAPPC12-221ENST00000489032 KIAA1109Q2LD37 5005 aa5.82□□□□□ -1.48
TRAPPC12-221ENST00000489032 ZNF705FA8MVS1 300 aaPredicted RBP5.81□□□□□ -1.48
TRAPPC12-221ENST00000489032 C1orf196B1AJZ1 125 aa5.81□□□□□ -1.48
TRAPPC12-221ENST00000489032 TSHBP01222 138 aa5.81□□□□□ -1.48
TRAPPC12-221ENST00000489032 RAB5AP20339 215 aa5.81□□□□□ -1.48
TRAPPC12-221ENST00000489032 TSPOP30536 169 aa5.81□□□□□ -1.48
TRAPPC12-221ENST00000489032 GNG4P50150 75 aa5.81□□□□□ -1.48
TRAPPC12-221ENST00000489032 CNN1P51911 297 aaKnown RBP5.81□□□□□ -1.48
TRAPPC12-221ENST00000489032 LINC01547P58512 204 aaPredicted RBP5.81□□□□□ -1.48
TRAPPC12-221ENST00000489032 TAS2R60P59551 318 aa5.81□□□□□ -1.48
TRAPPC12-221ENST00000489032 DEFB1P60022 68 aa5.81□□□□□ -1.48
TRAPPC12-221ENST00000489032 RAB5BP61020 215 aa5.81□□□□□ -1.48
TRAPPC12-221ENST00000489032 FLI1Q01543 452 aaPredicted RBP5.81□□□□□ -1.48
TRAPPC12-221ENST00000489032 KCNIP4Q6PIL6 250 aa5.81□□□□□ -1.48
TRAPPC12-221ENST00000489032 LINC01551Q86U37 167 aa5.81□□□□□ -1.48
TRAPPC12-221ENST00000489032 EXOC3-AS1Q8N2X6 119 aa5.81□□□□□ -1.48
TRAPPC12-221ENST00000489032 Q9H3A6 140 aa5.81□□□□□ -1.48
TRAPPC12-221ENST00000489032 RETNQ9HD89 108 aa5.81□□□□□ -1.48
TRAPPC12-221ENST00000489032 OTORQ9NRC9 128 aa5.81□□□□□ -1.48
TRAPPC12-221ENST00000489032 XCL2Q9UBD3 114 aa5.81□□□□□ -1.48
TRAPPC12-221ENST00000489032 GOLT1BQ9Y3E0 138 aa5.81□□□□□ -1.48
TRAPPC12-221ENST00000489032 IGLV9-49A0A0B4J1Y8 123 aa5.8□□□□□ -1.48
TRAPPC12-221ENST00000489032 PGPA6NDG6 321 aa5.8□□□□□ -1.48
TRAPPC12-221ENST00000489032 GGTLC3B5MD39 225 aa5.8□□□□□ -1.48
TRAPPC12-221ENST00000489032 ZNF705DP0CH99 300 aaPredicted RBP5.8□□□□□ -1.48
TRAPPC12-221ENST00000489032 ZNF705BP0CI00 300 aaPredicted RBP5.8□□□□□ -1.48
TRAPPC12-221ENST00000489032 RPL35P42766 123 aaKnown RBP5.8□□□□□ -1.48
TRAPPC12-221ENST00000489032 TMEM78Q5T7P6 136 aa5.8□□□□□ -1.48
TRAPPC12-221ENST00000489032 OR11H2Q8NH07 326 aa5.8□□□□□ -1.48
TRAPPC12-221ENST00000489032 ISOC2Q96AB3 205 aa5.8□□□□□ -1.48
TRAPPC12-221ENST00000489032 LINC00477Q96M19 166 aa5.8□□□□□ -1.48
TRAPPC12-221ENST00000489032 IMMP2LQ96T52 175 aa5.8□□□□□ -1.48
TRAPPC12-221ENST00000489032 OVOL2Q9BRP0 275 aa5.8□□□□□ -1.48
TRAPPC12-221ENST00000489032 A8MTW9 85 aa5.79□□□□□ -1.48
TRAPPC12-221ENST00000489032 K7EQM0 130 aa5.79□□□□□ -1.48
TRAPPC12-221ENST00000489032 M0R3E3 92 aa5.79□□□□□ -1.48
TRAPPC12-221ENST00000489032 PEX7O00628 323 aa5.79□□□□□ -1.48
TRAPPC12-221ENST00000489032 INSP01308 110 aa5.79□□□□□ -1.48
TRAPPC12-221ENST00000489032 SLC25A5P05141 298 aaKnown RBP5.79□□□□□ -1.48
TRAPPC12-221ENST00000489032 LEPP41159 167 aa5.79□□□□□ -1.48
TRAPPC12-221ENST00000489032 CDKN1BP46527 198 aa5.79□□□□□ -1.48
TRAPPC12-221ENST00000489032 FXYD7P58549 80 aa5.79□□□□□ -1.48
TRAPPC12-221ENST00000489032 UBE2G1P62253 170 aa5.79□□□□□ -1.48
TRAPPC12-221ENST00000489032 RPL19P84098 196 aaKnown RBP5.79□□□□□ -1.48
TRAPPC12-221ENST00000489032 ELOBQ15370 118 aa5.79□□□□□ -1.48
TRAPPC12-221ENST00000489032 ARL6IP6Q8N6S5 226 aa5.79□□□□□ -1.48
TRAPPC12-221ENST00000489032 C5orf17Q8NAS9 161 aa5.79□□□□□ -1.48
TRAPPC12-221ENST00000489032 OR10G8Q8NGN5 311 aa5.79□□□□□ -1.48
TRAPPC12-221ENST00000489032 PHLDA1Q8WV24 401 aaPredicted RBP5.79□□□□□ -1.48
TRAPPC12-221ENST00000489032 SMIM12Q96EX1 92 aa5.79□□□□□ -1.48
TRAPPC12-221ENST00000489032 SFRP2Q96HF1 295 aa5.79□□□□□ -1.48
TRAPPC12-221ENST00000489032 YPEL4Q96NS1 127 aa5.79□□□□□ -1.48
TRAPPC12-221ENST00000489032 TMEM208Q9BTX3 173 aa5.79□□□□□ -1.48
TRAPPC12-221ENST00000489032 DERL1Q9BUN8 251 aa5.79□□□□□ -1.48
TRAPPC12-221ENST00000489032 BIN3Q9NQY0 253 aa5.79□□□□□ -1.48
TRAPPC12-221ENST00000489032 EPDR1Q9UM22 224 aa5.79□□□□□ -1.48
TRAPPC12-221ENST00000489032 RPH3ALQ9UNE2 315 aa5.79□□□□□ -1.48
TRAPPC12-221ENST00000489032 AGRNO00468 2067 aa5.78□□□□□ -1.48
TRAPPC12-221ENST00000489032 TRBV24-1A0A075B6N3 115 aa5.78□□□□□ -1.48
TRAPPC12-221ENST00000489032 IGHV3OR16-12A0A075B7B8 117 aa5.78□□□□□ -1.48
TRAPPC12-221ENST00000489032 SERTM2A0A1B0GWG4 89 aa5.78□□□□□ -1.48
TRAPPC12-221ENST00000489032 RBAKDNA6NC62 111 aa5.78□□□□□ -1.48
TRAPPC12-221ENST00000489032 RPS10P46783 165 aaKnown RBP5.78□□□□□ -1.48
TRAPPC12-221ENST00000489032 ZNF415Q09FC8 603 aa5.78□□□□□ -1.48
TRAPPC12-221ENST00000489032 TMEM183BQ1AE95 376 aa5.78□□□□□ -1.48
TRAPPC12-221ENST00000489032 SPINK13Q1W4C9 94 aa5.78□□□□□ -1.48
TRAPPC12-221ENST00000489032 KIAA1644Q3SXP7 199 aa5.78□□□□□ -1.48
TRAPPC12-221ENST00000489032 CENPWQ5EE01 88 aa5.78□□□□□ -1.48
TRAPPC12-221ENST00000489032 OCC1Q8TAD7 63 aa5.78□□□□□ -1.48
TRAPPC12-221ENST00000489032 FMC1Q96HJ9 113 aa5.78□□□□□ -1.48
TRAPPC12-221ENST00000489032 FAM210BQ96KR6 192 aa5.78□□□□□ -1.48
TRAPPC12-221ENST00000489032 IGF2BP2-AS1Q96M15 143 aa5.78□□□□□ -1.48
TRAPPC12-221ENST00000489032 ODF3Q96PU9 254 aa5.78□□□□□ -1.48
TRAPPC12-221ENST00000489032 ATG101Q9BSB4 218 aa5.78□□□□□ -1.48
TRAPPC12-221ENST00000489032 URGCP-MRPS24S4R325 110 aa5.78□□□□□ -1.48
TRAPPC12-221ENST00000489032 TRBV20OR9-2A0A075B6H5 130 aa5.77□□□□□ -1.49
TRAPPC12-221ENST00000489032 TRAV9-1A0A075B6T8 112 aa5.77□□□□□ -1.49
TRAPPC12-221ENST00000489032 IGKV2-40A0A087WW87 121 aaPredicted RBP5.77□□□□□ -1.49
TRAPPC12-221ENST00000489032 LOC105371267A0A1B0GV96 52 aa5.77□□□□□ -1.49
TRAPPC12-221ENST00000489032 SMIM9A6NGZ8 99 aa5.77□□□□□ -1.49
TRAPPC12-221ENST00000489032 M0R2Z0 102 aa5.77□□□□□ -1.49
TRAPPC12-221ENST00000489032 GCGP01275 180 aa5.77□□□□□ -1.49
TRAPPC12-221ENST00000489032 IGKV2D-40P01614 121 aaPredicted RBP5.77□□□□□ -1.49
TRAPPC12-221ENST00000489032 S100A6P06703 90 aa5.77□□□□□ -1.49
TRAPPC12-221ENST00000489032 PFN1P07737 140 aaKnown RBP5.77□□□□□ -1.49
TRAPPC12-221ENST00000489032 GIG44P09565 113 aaPredicted RBP5.77□□□□□ -1.49
TRAPPC12-221ENST00000489032 PRB4P10163 310 aaPredicted RBP5.77□□□□□ -1.49
TRAPPC12-221ENST00000489032 MIFP14174 115 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms