RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 ATP6V0E2Q8NHE4 81 aa12.27□□□□□ -0.45
HDAC6-231ENST00000488905 SUN5Q8TC36 379 aa12.27□□□□□ -0.45
HDAC6-231ENST00000488905 PTH2Q96A98 100 aa12.27□□□□□ -0.45
HDAC6-231ENST00000488905 GGTLC3B5MD39 225 aa12.26□□□□□ -0.45
HDAC6-231ENST00000488905 IGLV2-11P01706 119 aa12.26□□□□□ -0.45
HDAC6-231ENST00000488905 RNASE3P12724 160 aaKnown RBP12.26□□□□□ -0.45
HDAC6-231ENST00000488905 GCHFRP30047 84 aa12.26□□□□□ -0.45
HDAC6-231ENST00000488905 FLI1Q01543 452 aaPredicted RBP12.26□□□□□ -0.45
HDAC6-231ENST00000488905 SMUG1Q53HV7 270 aa12.26□□□□□ -0.45
HDAC6-231ENST00000488905 HSD17B11Q8NBQ5 300 aa12.26□□□□□ -0.45
HDAC6-231ENST00000488905 RAB24Q969Q5 203 aa12.26□□□□□ -0.45
HDAC6-231ENST00000488905 PRNTQ86SH4 94 aa12.25□□□□□ -0.45
HDAC6-231ENST00000488905 CYB561D1Q8N8Q1 229 aa12.25□□□□□ -0.45
HDAC6-231ENST00000488905 PSMG3Q9BT73 122 aaPredicted RBP12.25□□□□□ -0.45
HDAC6-231ENST00000488905 FAM30AQ9NZY2 134 aa12.25□□□□□ -0.45
HDAC6-231ENST00000488905 C1QBP02746 253 aa12.24□□□□□ -0.45
HDAC6-231ENST00000488905 WFDC2Q14508 124 aa12.24□□□□□ -0.45
HDAC6-231ENST00000488905 Q8N3U1 123 aa12.24□□□□□ -0.45
HDAC6-231ENST00000488905 TM2D2Q9BX73 214 aa12.24□□□□□ -0.45
HDAC6-231ENST00000488905 LINC00694P0DN24 101 aa12.23□□□□□ -0.45
HDAC6-231ENST00000488905 SUMO1P63165 101 aaKnown RBP12.23□□□□□ -0.45
HDAC6-231ENST00000488905 PARLQ9H300 379 aa12.23□□□□□ -0.45
HDAC6-231ENST00000488905 TMEM167BQ9NRX6 74 aa12.23□□□□□ -0.45
HDAC6-231ENST00000488905 EPDR1Q9UM22 224 aa12.23□□□□□ -0.45
HDAC6-231ENST00000488905 CXorf1O96002 111 aa12.22□□□□□ -0.45
HDAC6-231ENST00000488905 MBP02144 154 aa12.22□□□□□ -0.45
HDAC6-231ENST00000488905 ATP6V0CP27449 155 aa12.22□□□□□ -0.45
HDAC6-231ENST00000488905 ZFP2Q6ZN57 461 aa12.22□□□□□ -0.45
HDAC6-231ENST00000488905 GAGE12JA6NER3 117 aa12.21□□□□□ -0.45
HDAC6-231ENST00000488905 A8MWV9 139 aa12.21□□□□□ -0.45
HDAC6-231ENST00000488905 GAGE1Q13065 139 aa12.21□□□□□ -0.45
HDAC6-231ENST00000488905 GAGE4Q13068 117 aa12.21□□□□□ -0.45
HDAC6-231ENST00000488905 GAGE5Q13069 117 aa12.21□□□□□ -0.45
HDAC6-231ENST00000488905 GAGE13Q4V321 117 aa12.21□□□□□ -0.45
HDAC6-231ENST00000488905 PIK3CD-AS1Q5SR53 167 aa12.21□□□□□ -0.45
HDAC6-231ENST00000488905 SAPCD1Q5SSQ6 148 aa12.21□□□□□ -0.45
HDAC6-231ENST00000488905 AQP10Q96PS8 301 aa12.21□□□□□ -0.45
HDAC6-231ENST00000488905 SH3BGRL3Q9H299 93 aa12.21□□□□□ -0.45
HDAC6-231ENST00000488905 TRAV8-3A0A0A6YYJ7 113 aa12.2□□□□□ -0.46
HDAC6-231ENST00000488905 IGKV3D-20A0A0C4DH25 116 aa12.2□□□□□ -0.46
HDAC6-231ENST00000488905 S100A4P26447 101 aaKnown RBP12.2□□□□□ -0.46
HDAC6-231ENST00000488905 SERF2P84101 59 aa12.2□□□□□ -0.46
HDAC6-231ENST00000488905 Q6ZSA8 131 aa12.2□□□□□ -0.46
HDAC6-231ENST00000488905 ALG5Q9Y673 324 aa12.2□□□□□ -0.46
HDAC6-231ENST00000488905 ASIPP42127 132 aa12.19□□□□□ -0.46
HDAC6-231ENST00000488905 LGALSLQ3ZCW2 172 aaPredicted RBP12.19□□□□□ -0.46
HDAC6-231ENST00000488905 DAZ4Q86SG3 579 aaKnown RBP12.19□□□□□ -0.46
HDAC6-231ENST00000488905 ACTR3CQ9C0K3 210 aaPredicted RBP12.19□□□□□ -0.46
HDAC6-231ENST00000488905 DAZ3Q9NR90 486 aaKnown RBP12.19□□□□□ -0.46
HDAC6-231ENST00000488905 ARL2-SNX15V9GYD0 113 aa12.19□□□□□ -0.46
HDAC6-231ENST00000488905 A0A1W2PRE2 83 aa12.18□□□□□ -0.46
HDAC6-231ENST00000488905 A6NHS1 94 aa12.18□□□□□ -0.46
HDAC6-231ENST00000488905 LECT2O14960 151 aa12.18□□□□□ -0.46
HDAC6-231ENST00000488905 TOR2AQ5JU69 321 aa12.18□□□□□ -0.46
HDAC6-231ENST00000488905 UFSP1Q6NVU6 142 aa12.18□□□□□ -0.46
HDAC6-231ENST00000488905 LINC00479Q96M42 142 aa12.18□□□□□ -0.46
HDAC6-231ENST00000488905 A0A087WWC5 75 aa12.17□□□□□ -0.46
HDAC6-231ENST00000488905 TRAV34A0A0B4J273 112 aa12.17□□□□□ -0.46
HDAC6-231ENST00000488905 Q86TA4 180 aa12.17□□□□□ -0.46
HDAC6-231ENST00000488905 OR2T35Q8NGX2 323 aa12.17□□□□□ -0.46
HDAC6-231ENST00000488905 JPT2Q9H910 190 aa12.17□□□□□ -0.46
HDAC6-231ENST00000488905 IL36BQ9NZH7 164 aa12.17□□□□□ -0.46
HDAC6-231ENST00000488905 Q9UF83 564 aa12.17□□□□□ -0.46
HDAC6-231ENST00000488905 TNFSF18Q9UNG2 199 aa12.17□□□□□ -0.46
HDAC6-231ENST00000488905 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.16□□□□□ -0.46
HDAC6-231ENST00000488905 H3BVH4 76 aa12.16□□□□□ -0.46
HDAC6-231ENST00000488905 J3QL48 77 aa12.16□□□□□ -0.46
HDAC6-231ENST00000488905 PLA2G1BP04054 148 aaKnown RBP12.16□□□□□ -0.46
HDAC6-231ENST00000488905 LINC00528Q8N1L1 170 aa12.16□□□□□ -0.46
HDAC6-231ENST00000488905 C14orf178Q8N769 122 aaPredicted RBP12.16□□□□□ -0.46
HDAC6-231ENST00000488905 SAMD10Q9BYL1 202 aa12.16□□□□□ -0.46
HDAC6-231ENST00000488905 FABP5P3A8MUU1 101 aa12.15□□□□□ -0.46
HDAC6-231ENST00000488905 B4DEV8 164 aa12.15□□□□□ -0.46
HDAC6-231ENST00000488905 RHODO00212 210 aa12.15□□□□□ -0.46
HDAC6-231ENST00000488905 PEX7O00628 323 aa12.15□□□□□ -0.46
HDAC6-231ENST00000488905 FGF8P55075 233 aaPredicted RBP12.15□□□□□ -0.46
HDAC6-231ENST00000488905 COX11Q9Y6N1 276 aa12.15□□□□□ -0.46
HDAC6-231ENST00000488905 LRP1Q07954 4544 aaKnown RBP12.15□□□□□ -0.46
HDAC6-231ENST00000488905 IFNA7P01567 189 aa12.14□□□□□ -0.47
HDAC6-231ENST00000488905 FAT3Q8TDW7 4589 aa12.13□□□□□ -0.47
HDAC6-231ENST00000488905 CTXND1A0A1B0GTU2 59 aa12.13□□□□□ -0.47
HDAC6-231ENST00000488905 UBE2G2P60604 165 aa12.13□□□□□ -0.47
HDAC6-231ENST00000488905 ZNF726P1Q15940 193 aa12.13□□□□□ -0.47
HDAC6-231ENST00000488905 DMRTA1Q5VZB9 504 aa12.13□□□□□ -0.47
HDAC6-231ENST00000488905 SYT8Q8NBV8 401 aa12.13□□□□□ -0.47
HDAC6-231ENST00000488905 BAALCQ8WXS3 180 aa12.13□□□□□ -0.47
HDAC6-231ENST00000488905 RMI2Q96E14 147 aa12.13□□□□□ -0.47
HDAC6-231ENST00000488905 URGCP-MRPS24S4R325 110 aa12.13□□□□□ -0.47
HDAC6-231ENST00000488905 PKHD1L1Q86WI1 4243 aa12.12□□□□□ -0.47
HDAC6-231ENST00000488905 DNLZQ5SXM8 178 aa12.12□□□□□ -0.47
HDAC6-231ENST00000488905 FAM74A4Q5TZK3 123 aa12.12□□□□□ -0.47
HDAC6-231ENST00000488905 RPL7L1Q6DKI1 246 aaKnown RBP12.12□□□□□ -0.47
HDAC6-231ENST00000488905 NIT1Q86X76 327 aa12.12□□□□□ -0.47
HDAC6-231ENST00000488905 OR11H4Q8NGC9 324 aa12.12□□□□□ -0.47
HDAC6-231ENST00000488905 ZC2HC1AQ96GY0 325 aa12.12□□□□□ -0.47
HDAC6-231ENST00000488905 MED28Q9H204 178 aa12.12□□□□□ -0.47
HDAC6-231ENST00000488905 RNF222A6NCQ9 220 aa12.11□□□□□ -0.47
HDAC6-231ENST00000488905 KRBOX1C9JBD0 128 aa12.11□□□□□ -0.47
HDAC6-231ENST00000488905 M0R036 132 aa12.11□□□□□ -0.47
HDAC6-231ENST00000488905 ARMS2P0C7Q2 107 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms