RNA–Protein interactions for RNA: ENST00000488774.1

PTPRD-212, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 3

Gene PTPRD, Length 420 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-212ENST00000488774 CRYBA4P53673 196 aa4.48□□□□□ -1.69
PTPRD-212ENST00000488774 ZNF415Q09FC8 603 aa4.48□□□□□ -1.69
PTPRD-212ENST00000488774 CFAP126Q5VTH2 177 aa4.48□□□□□ -1.69
PTPRD-212ENST00000488774 FAM159AQ6UWV7 190 aa4.48□□□□□ -1.69
PTPRD-212ENST00000488774 Q6ZR54 194 aa4.48□□□□□ -1.69
PTPRD-212ENST00000488774 Q8N3U1 123 aa4.48□□□□□ -1.69
PTPRD-212ENST00000488774 ZNRF2Q8NHG8 242 aa4.48□□□□□ -1.69
PTPRD-212ENST00000488774 HIST1H2BAQ96A08 127 aa4.48□□□□□ -1.69
PTPRD-212ENST00000488774 FMC1Q96HJ9 113 aa4.48□□□□□ -1.69
PTPRD-212ENST00000488774 C18orf15Q96N68 181 aa4.48□□□□□ -1.69
PTPRD-212ENST00000488774 KRTAP17-1Q9BYP8 105 aa4.48□□□□□ -1.69
PTPRD-212ENST00000488774 SCRT2Q9NQ03 307 aa4.48□□□□□ -1.69
PTPRD-212ENST00000488774 APOBP04114 4563 aaKnown RBP4.48□□□□□ -1.69
PTPRD-212ENST00000488774 HSPG2P98160 4391 aa4.48□□□□□ -1.69
PTPRD-212ENST00000488774 TRGV2A0A075B6R0 118 aa4.47□□□□□ -1.69
PTPRD-212ENST00000488774 TEX48A0A1B0GUV7 120 aa4.47□□□□□ -1.69
PTPRD-212ENST00000488774 SERTM2A0A1B0GWG4 89 aa4.47□□□□□ -1.69
PTPRD-212ENST00000488774 C19orf71A6NCJ1 209 aa4.47□□□□□ -1.69
PTPRD-212ENST00000488774 B4DEV8 164 aa4.47□□□□□ -1.69
PTPRD-212ENST00000488774 M0R2P5 195 aa4.47□□□□□ -1.69
PTPRD-212ENST00000488774 RS1O15537 224 aa4.47□□□□□ -1.69
PTPRD-212ENST00000488774 IFITM2Q01629 132 aa4.47□□□□□ -1.69
PTPRD-212ENST00000488774 LGALS9BQ3B8N2 356 aa4.47□□□□□ -1.69
PTPRD-212ENST00000488774 CENPWQ5EE01 88 aa4.47□□□□□ -1.69
PTPRD-212ENST00000488774 C14orf178Q8N769 122 aaPredicted RBP4.47□□□□□ -1.69
PTPRD-212ENST00000488774 SDF2L1Q9HCN8 221 aa4.47□□□□□ -1.69
PTPRD-212ENST00000488774 TNFRSF18Q9Y5U5 241 aa4.47□□□□□ -1.69
PTPRD-212ENST00000488774 KIAA1109Q2LD37 5005 aa4.46□□□□□ -1.69
PTPRD-212ENST00000488774 TRGV11A0A075B6L2 103 aa4.46□□□□□ -1.7
PTPRD-212ENST00000488774 RBFOX3A6NFN3 312 aa4.46□□□□□ -1.7
PTPRD-212ENST00000488774 FABP5P3A8MUU1 101 aa4.46□□□□□ -1.7
PTPRD-212ENST00000488774 K7EQD1 137 aa4.46□□□□□ -1.7
PTPRD-212ENST00000488774 ORM1P02763 201 aa4.46□□□□□ -1.7
PTPRD-212ENST00000488774 ARMS2P0C7Q2 107 aa4.46□□□□□ -1.7
PTPRD-212ENST00000488774 GATA1P15976 413 aaPredicted RBP4.46□□□□□ -1.7
PTPRD-212ENST00000488774 RAB5CP51148 216 aa4.46□□□□□ -1.7
PTPRD-212ENST00000488774 EIF5AP63241 154 aaKnown RBP4.46□□□□□ -1.7
PTPRD-212ENST00000488774 MEF2BQ02080 365 aaPredicted RBP4.46□□□□□ -1.7
PTPRD-212ENST00000488774 ZNF876PQ49A33 203 aa4.46□□□□□ -1.7
PTPRD-212ENST00000488774 DNLZQ5SXM8 178 aa4.46□□□□□ -1.7
PTPRD-212ENST00000488774 FAM162BQ5T6X4 162 aa4.46□□□□□ -1.7
PTPRD-212ENST00000488774 PRR27Q6MZM9 219 aa4.46□□□□□ -1.7
PTPRD-212ENST00000488774 BAGE2Q86Y30 109 aa4.46□□□□□ -1.7
PTPRD-212ENST00000488774 SLC25A29Q8N8R3 303 aa4.46□□□□□ -1.7
PTPRD-212ENST00000488774 OR10AG1Q8NH19 301 aa4.46□□□□□ -1.7
PTPRD-212ENST00000488774 OCC1Q8TAD7 63 aa4.46□□□□□ -1.7
PTPRD-212ENST00000488774 MANBALQ9NQG1 85 aa4.46□□□□□ -1.7
PTPRD-212ENST00000488774 MSRB1Q9NZV6 116 aa4.46□□□□□ -1.7
PTPRD-212ENST00000488774 ZFP30Q9Y2G7 519 aa4.46□□□□□ -1.7
PTPRD-212ENST00000488774 DNAH8Q96JB1 4490 aa4.46□□□□□ -1.7
PTPRD-212ENST00000488774 A0A087WWL8 130 aa4.45□□□□□ -1.7
PTPRD-212ENST00000488774 TRAV4A0A0B4J268 109 aa4.45□□□□□ -1.7
PTPRD-212ENST00000488774 A0A1B0GVY2 172 aa4.45□□□□□ -1.7
PTPRD-212ENST00000488774 K7EQM0 130 aa4.45□□□□□ -1.7
PTPRD-212ENST00000488774 CRYGDP07320 174 aa4.45□□□□□ -1.7
PTPRD-212ENST00000488774 LINC00694P0DN24 101 aa4.45□□□□□ -1.7
PTPRD-212ENST00000488774 TCTAP57738 103 aa4.45□□□□□ -1.7
PTPRD-212ENST00000488774 LINC00315P59091 139 aa4.45□□□□□ -1.7
PTPRD-212ENST00000488774 SSTP61278 116 aa4.45□□□□□ -1.7
PTPRD-212ENST00000488774 UBE2G1P62253 170 aa4.45□□□□□ -1.7
PTPRD-212ENST00000488774 TNP2Q05952 138 aa4.45□□□□□ -1.7
PTPRD-212ENST00000488774 TOR2AQ5JU69 321 aa4.45□□□□□ -1.7
PTPRD-212ENST00000488774 SAPCD1Q5SSQ6 148 aa4.45□□□□□ -1.7
PTPRD-212ENST00000488774 TEX261Q6UWH6 196 aa4.45□□□□□ -1.7
PTPRD-212ENST00000488774 FAM210BQ96KR6 192 aa4.45□□□□□ -1.7
PTPRD-212ENST00000488774 SPXQ9BT56 116 aa4.45□□□□□ -1.7
PTPRD-212ENST00000488774 NDFIP1Q9BT67 221 aa4.45□□□□□ -1.7
PTPRD-212ENST00000488774 NKX6-2Q9C056 277 aaPredicted RBP4.45□□□□□ -1.7
PTPRD-212ENST00000488774 RNASE7Q9H1E1 156 aaKnown RBP4.45□□□□□ -1.7
PTPRD-212ENST00000488774 PARLQ9H300 379 aa4.45□□□□□ -1.7
PTPRD-212ENST00000488774 IL36BQ9NZH7 164 aa4.45□□□□□ -1.7
PTPRD-212ENST00000488774 VAX2Q9UIW0 290 aa4.45□□□□□ -1.7
PTPRD-212ENST00000488774 HHLA3Q9XRX5 114 aa4.45□□□□□ -1.7
PTPRD-212ENST00000488774 PAX4O43316 350 aa4.44□□□□□ -1.7
PTPRD-212ENST00000488774 NXPH4O95158 308 aa4.44□□□□□ -1.7
PTPRD-212ENST00000488774 SRP19P09132 144 aaKnown RBP4.44□□□□□ -1.7
PTPRD-212ENST00000488774 GYPEP15421 78 aa4.44□□□□□ -1.7
PTPRD-212ENST00000488774 FUSP35637 526 aaKnown RBP eCLIP4.44□□□□□ -1.7
PTPRD-212ENST00000488774 PPT1P50897 306 aa4.44□□□□□ -1.7
PTPRD-212ENST00000488774 FOXA3P55318 350 aaPredicted RBP4.44□□□□□ -1.7
PTPRD-212ENST00000488774 LYPD5Q6UWN5 251 aa4.44□□□□□ -1.7
PTPRD-212ENST00000488774 WFDC10BQ8IUB3 73 aa4.44□□□□□ -1.7
PTPRD-212ENST00000488774 C15orf53Q8NAA6 179 aa4.44□□□□□ -1.7
PTPRD-212ENST00000488774 NUDT10Q8NFP7 164 aa4.44□□□□□ -1.7
PTPRD-212ENST00000488774 OR4C5Q8NGB2 326 aa4.44□□□□□ -1.7
PTPRD-212ENST00000488774 NUDT11Q96G61 164 aa4.44□□□□□ -1.7
PTPRD-212ENST00000488774 KCNS1Q96KK3 526 aa4.44□□□□□ -1.7
PTPRD-212ENST00000488774 DNAJC30Q96LL9 226 aa4.44□□□□□ -1.7
PTPRD-212ENST00000488774 MED9Q9NWA0 146 aa4.44□□□□□ -1.7
PTPRD-212ENST00000488774 KIF25-AS1Q9Y6Z4 181 aa4.44□□□□□ -1.7
PTPRD-212ENST00000488774 TRGV4A0A0C4DH28 118 aa4.43□□□□□ -1.7
PTPRD-212ENST00000488774 FBLL1A6NHQ2 334 aaKnown RBP4.43□□□□□ -1.7
PTPRD-212ENST00000488774 M0R381 172 aa4.43□□□□□ -1.7
PTPRD-212ENST00000488774 SNAI2O43623 268 aa4.43□□□□□ -1.7
PTPRD-212ENST00000488774 IGLC6P0CF74 106 aa4.43□□□□□ -1.7
PTPRD-212ENST00000488774 MGST1P10620 155 aaKnown RBP4.43□□□□□ -1.7
PTPRD-212ENST00000488774 ASIPP42127 132 aa4.43□□□□□ -1.7
PTPRD-212ENST00000488774 RNF212Q495C1 297 aa4.43□□□□□ -1.7
PTPRD-212ENST00000488774 GTSF1Q8WW33 167 aa4.43□□□□□ -1.7
PTPRD-212ENST00000488774 PTH2Q96A98 100 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms