RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 GCGP01275 180 aa12.53□□□□□ -0.4
GGPS1-206ENST00000488594 LINC00694P0DN24 101 aa12.53□□□□□ -0.4
GGPS1-206ENST00000488594 ZNF80P51504 273 aaPredicted RBP12.53□□□□□ -0.4
GGPS1-206ENST00000488594 ZFP69Q49AA0 526 aa12.53□□□□□ -0.4
GGPS1-206ENST00000488594 PIK3CD-AS1Q5SR53 167 aa12.53□□□□□ -0.4
GGPS1-206ENST00000488594 C5orf17Q8NAS9 161 aa12.53□□□□□ -0.4
GGPS1-206ENST00000488594 BAALCQ8WXS3 180 aa12.53□□□□□ -0.4
GGPS1-206ENST00000488594 SMIM3Q9BZL3 60 aa12.53□□□□□ -0.4
GGPS1-206ENST00000488594 GAGE12JA6NER3 117 aa12.52□□□□□ -0.41
GGPS1-206ENST00000488594 TCRAP04437 139 aa12.52□□□□□ -0.41
GGPS1-206ENST00000488594 RNASE3P12724 160 aaKnown RBP12.52□□□□□ -0.41
GGPS1-206ENST00000488594 GAGE1Q13065 139 aa12.52□□□□□ -0.41
GGPS1-206ENST00000488594 GAGE4Q13068 117 aa12.52□□□□□ -0.41
GGPS1-206ENST00000488594 GAGE5Q13069 117 aa12.52□□□□□ -0.41
GGPS1-206ENST00000488594 GAGE13Q4V321 117 aa12.52□□□□□ -0.41
GGPS1-206ENST00000488594 CYB561D1Q8N8Q1 229 aa12.52□□□□□ -0.41
GGPS1-206ENST00000488594 ENKURQ8TC29 256 aa12.52□□□□□ -0.41
GGPS1-206ENST00000488594 SGK494Q96LW2 274 aa12.52□□□□□ -0.41
GGPS1-206ENST00000488594 PARLQ9H300 379 aa12.52□□□□□ -0.41
GGPS1-206ENST00000488594 RPL12P30050 165 aaKnown RBP12.51□□□□□ -0.41
GGPS1-206ENST00000488594 FGF8P55075 233 aaPredicted RBP12.51□□□□□ -0.41
GGPS1-206ENST00000488594 H2BFSP57053 126 aa12.51□□□□□ -0.41
GGPS1-206ENST00000488594 LINC01620Q4KN68 170 aa12.51□□□□□ -0.41
GGPS1-206ENST00000488594 SMUG1Q53HV7 270 aa12.51□□□□□ -0.41
GGPS1-206ENST00000488594 PSG8Q9UQ74 426 aa12.51□□□□□ -0.41
GGPS1-206ENST00000488594 URGCP-MRPS24S4R325 110 aa12.51□□□□□ -0.41
GGPS1-206ENST00000488594 RNF222A6NCQ9 220 aa12.5□□□□□ -0.41
GGPS1-206ENST00000488594 MPC2O95563 127 aa12.5□□□□□ -0.41
GGPS1-206ENST00000488594 KRTAP10-4P60372 401 aaPredicted RBP12.5□□□□□ -0.41
GGPS1-206ENST00000488594 RAB2AP61019 212 aa12.5□□□□□ -0.41
GGPS1-206ENST00000488594 TMEM75Q8N9X5 138 aa12.5□□□□□ -0.41
GGPS1-206ENST00000488594 NDUFA13Q9P0J0 144 aa12.5□□□□□ -0.41
GGPS1-206ENST00000488594 ARL14EPLP0DKL9 152 aa12.49□□□□□ -0.41
GGPS1-206ENST00000488594 LINC00299Q6ZSB3 139 aa12.49□□□□□ -0.41
GGPS1-206ENST00000488594 OR10G9Q8NGN4 311 aa12.49□□□□□ -0.41
GGPS1-206ENST00000488594 OR10G7Q8NGN6 311 aa12.49□□□□□ -0.41
GGPS1-206ENST00000488594 HMGB3O15347 200 aaKnown RBP12.48□□□□□ -0.41
GGPS1-206ENST00000488594 FLI1Q01543 452 aaPredicted RBP12.48□□□□□ -0.41
GGPS1-206ENST00000488594 SAPCD1Q5SSQ6 148 aa12.48□□□□□ -0.41
GGPS1-206ENST00000488594 CIRBP-AS1Q8TBR5 109 aa12.48□□□□□ -0.41
GGPS1-206ENST00000488594 LINC00479Q96M42 142 aa12.48□□□□□ -0.41
GGPS1-206ENST00000488594 IGLV2-11P01706 119 aa12.47□□□□□ -0.41
GGPS1-206ENST00000488594 S100A4P26447 101 aaKnown RBP12.47□□□□□ -0.41
GGPS1-206ENST00000488594 LGALSLQ3ZCW2 172 aaPredicted RBP12.47□□□□□ -0.41
GGPS1-206ENST00000488594 OR2T35Q8NGX2 323 aa12.47□□□□□ -0.41
GGPS1-206ENST00000488594 WFDC1Q9HC57 220 aa12.47□□□□□ -0.41
GGPS1-206ENST00000488594 IGKV2D-24A0A075B6R9 120 aa12.46□□□□□ -0.41
GGPS1-206ENST00000488594 IGLV2-8P01709 118 aa12.46□□□□□ -0.41
GGPS1-206ENST00000488594 STAG3L2P0CL84 134 aa12.46□□□□□ -0.41
GGPS1-206ENST00000488594 STAG3L3P0CL85 134 aa12.46□□□□□ -0.41
GGPS1-206ENST00000488594 CDC34P49427 236 aaPredicted RBP12.46□□□□□ -0.41
GGPS1-206ENST00000488594 PRNTQ86SH4 94 aa12.46□□□□□ -0.41
GGPS1-206ENST00000488594 NIT1Q86X76 327 aa12.46□□□□□ -0.41
GGPS1-206ENST00000488594 SUN5Q8TC36 379 aa12.46□□□□□ -0.41
GGPS1-206ENST00000488594 PLA2G2DQ9UNK4 145 aa12.46□□□□□ -0.41
GGPS1-206ENST00000488594 INMT-MINDY4F8WBC2 141 aa12.45□□□□□ -0.42
GGPS1-206ENST00000488594 RHODO00212 210 aa12.45□□□□□ -0.42
GGPS1-206ENST00000488594 ASIPP42127 132 aa12.45□□□□□ -0.42
GGPS1-206ENST00000488594 ELOBQ15370 118 aa12.45□□□□□ -0.42
GGPS1-206ENST00000488594 UFSP1Q6NVU6 142 aa12.45□□□□□ -0.42
GGPS1-206ENST00000488594 S100ZQ8WXG8 99 aa12.45□□□□□ -0.42
GGPS1-206ENST00000488594 CHCHD7Q9BUK0 85 aa12.45□□□□□ -0.42
GGPS1-206ENST00000488594 SAMD10Q9BYL1 202 aa12.45□□□□□ -0.42
GGPS1-206ENST00000488594 EPDR1Q9UM22 224 aa12.45□□□□□ -0.42
GGPS1-206ENST00000488594 IGKV3D-20A0A0C4DH25 116 aa12.44□□□□□ -0.42
GGPS1-206ENST00000488594 GCHFRP30047 84 aa12.44□□□□□ -0.42
GGPS1-206ENST00000488594 IL36BQ9NZH7 164 aa12.44□□□□□ -0.42
GGPS1-206ENST00000488594 Q9UF83 564 aa12.44□□□□□ -0.42
GGPS1-206ENST00000488594 KLK12Q9UKR0 248 aa12.44□□□□□ -0.42
GGPS1-206ENST00000488594 HMCN2Q8NDA2 5059 aa12.44□□□□□ -0.42
GGPS1-206ENST00000488594 SUMO1P63165 101 aaKnown RBP12.43□□□□□ -0.42
GGPS1-206ENST00000488594 C14orf177Q52M58 125 aa12.43□□□□□ -0.42
GGPS1-206ENST00000488594 KCNIP4Q6PIL6 250 aa12.43□□□□□ -0.42
GGPS1-206ENST00000488594 C14orf178Q8N769 122 aaPredicted RBP12.43□□□□□ -0.42
GGPS1-206ENST00000488594 RAB24Q969Q5 203 aa12.43□□□□□ -0.42
GGPS1-206ENST00000488594 A0A087WX48 190 aa12.43□□□□□ -0.42
GGPS1-206ENST00000488594 SSNA1O43805 119 aa12.43□□□□□ -0.42
GGPS1-206ENST00000488594 ATRAIDQ6UW56 229 aa12.43□□□□□ -0.42
GGPS1-206ENST00000488594 OR2G3Q8NGZ4 309 aa12.43□□□□□ -0.42
GGPS1-206ENST00000488594 UBE2WQ96B02 151 aa12.43□□□□□ -0.42
GGPS1-206ENST00000488594 TMEM167BQ9NRX6 74 aa12.43□□□□□ -0.42
GGPS1-206ENST00000488594 FABP5P3A8MUU1 101 aa12.42□□□□□ -0.42
GGPS1-206ENST00000488594 UPK1BO75841 260 aa12.42□□□□□ -0.42
GGPS1-206ENST00000488594 Q0VG73 95 aa12.42□□□□□ -0.42
GGPS1-206ENST00000488594 DNAJC30Q96LL9 226 aa12.42□□□□□ -0.42
GGPS1-206ENST00000488594 JPT2Q9H910 190 aa12.42□□□□□ -0.42
GGPS1-206ENST00000488594 LRP1Q07954 4544 aaKnown RBP12.41□□□□□ -0.42
GGPS1-206ENST00000488594 MARVELD1Q9BSK0 173 aa12.41□□□□□ -0.42
GGPS1-206ENST00000488594 CXorf1O96002 111 aa12.4□□□□□ -0.42
GGPS1-206ENST00000488594 MBP02144 154 aa12.4□□□□□ -0.42
GGPS1-206ENST00000488594 DMRTA1Q5VZB9 504 aa12.4□□□□□ -0.42
GGPS1-206ENST00000488594 PSMG3Q9BT73 122 aaPredicted RBP12.4□□□□□ -0.42
GGPS1-206ENST00000488594 ARL2-SNX15V9GYD0 113 aa12.39□□□□□ -0.43
GGPS1-206ENST00000488594 TRBV10-1A0A0K0K1A3 114 aa12.38□□□□□ -0.43
GGPS1-206ENST00000488594 A0A1W2PRE2 83 aa12.38□□□□□ -0.43
GGPS1-206ENST00000488594 B4DEV8 164 aa12.38□□□□□ -0.43
GGPS1-206ENST00000488594 H3BVH4 76 aa12.38□□□□□ -0.43
GGPS1-206ENST00000488594 RPL37AP61513 92 aaKnown RBP12.38□□□□□ -0.43
GGPS1-206ENST00000488594 SERF2P84101 59 aa12.38□□□□□ -0.43
GGPS1-206ENST00000488594 DNLZQ5SXM8 178 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms