RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 LOC100131303A0A0U1RQF7 123 aa4.04□□□□□ -1.76
CDHR3-213ENST00000488386 hDV102S1A0JD36 115 aa4.04□□□□□ -1.76
CDHR3-213ENST00000488386 RNF222A6NCQ9 220 aa4.04□□□□□ -1.76
CDHR3-213ENST00000488386 TYMSP04818 313 aa4.04□□□□□ -1.76
CDHR3-213ENST00000488386 CDC34P49427 236 aaPredicted RBP4.04□□□□□ -1.76
CDHR3-213ENST00000488386 ZNF80P51504 273 aaPredicted RBP4.04□□□□□ -1.76
CDHR3-213ENST00000488386 ZNF415Q09FC8 603 aa4.04□□□□□ -1.76
CDHR3-213ENST00000488386 ZNF266Q14584 549 aa4.04□□□□□ -1.76
CDHR3-213ENST00000488386 SOHLH1Q5JUK2 328 aa4.04□□□□□ -1.76
CDHR3-213ENST00000488386 RPL7L1Q6DKI1 246 aaKnown RBP4.04□□□□□ -1.76
CDHR3-213ENST00000488386 IQCF2Q8IXL9 164 aa4.04□□□□□ -1.76
CDHR3-213ENST00000488386 CMTM2Q8TAZ6 248 aa4.04□□□□□ -1.76
CDHR3-213ENST00000488386 ST6GAL2Q96JF0 529 aa4.04□□□□□ -1.76
CDHR3-213ENST00000488386 LINC00467Q9BRT7 94 aa4.04□□□□□ -1.76
CDHR3-213ENST00000488386 IGHV3-73A0A0B4J1V6 119 aa4.03□□□□□ -1.76
CDHR3-213ENST00000488386 TRAV34A0A0B4J273 112 aa4.03□□□□□ -1.76
CDHR3-213ENST00000488386 TRGV4A0A0C4DH28 118 aa4.03□□□□□ -1.76
CDHR3-213ENST00000488386 RBAKDNA6NC62 111 aa4.03□□□□□ -1.76
CDHR3-213ENST00000488386 C16orf90A8MZG2 172 aa4.03□□□□□ -1.76
CDHR3-213ENST00000488386 G3V3Q6 166 aa4.03□□□□□ -1.76
CDHR3-213ENST00000488386 STAG3L2P0CL84 134 aa4.03□□□□□ -1.76
CDHR3-213ENST00000488386 STAG3L3P0CL85 134 aa4.03□□□□□ -1.76
CDHR3-213ENST00000488386 GCHFRP30047 84 aa4.03□□□□□ -1.76
CDHR3-213ENST00000488386 CRYBA4P53673 196 aa4.03□□□□□ -1.76
CDHR3-213ENST00000488386 FGF8P55075 233 aaPredicted RBP4.03□□□□□ -1.76
CDHR3-213ENST00000488386 LINC00315P59091 139 aa4.03□□□□□ -1.76
CDHR3-213ENST00000488386 UBE2G2P60604 165 aa4.03□□□□□ -1.76
CDHR3-213ENST00000488386 ZNF726P1Q15940 193 aa4.03□□□□□ -1.76
CDHR3-213ENST00000488386 IBA57Q5T440 356 aaKnown RBP4.03□□□□□ -1.76
CDHR3-213ENST00000488386 Q6AWC8 147 aa4.03□□□□□ -1.76
CDHR3-213ENST00000488386 FAM159AQ6UWV7 190 aa4.03□□□□□ -1.76
CDHR3-213ENST00000488386 PQLC2Q6ZP29 291 aa4.03□□□□□ -1.76
CDHR3-213ENST00000488386 PRNTQ86SH4 94 aa4.03□□□□□ -1.76
CDHR3-213ENST00000488386 LYPD1Q8N2G4 141 aa4.03□□□□□ -1.76
CDHR3-213ENST00000488386 LINC00479Q96M42 142 aa4.03□□□□□ -1.76
CDHR3-213ENST00000488386 AQP10Q96PS8 301 aa4.03□□□□□ -1.76
CDHR3-213ENST00000488386 TREM1Q9NP99 234 aa4.03□□□□□ -1.76
CDHR3-213ENST00000488386 MRPS16Q9Y3D3 137 aaKnown RBP4.03□□□□□ -1.76
CDHR3-213ENST00000488386 PAM16Q9Y3D7 125 aa4.03□□□□□ -1.76
CDHR3-213ENST00000488386 ICOSQ9Y6W8 199 aa4.03□□□□□ -1.76
CDHR3-213ENST00000488386 GGTLC3B5MD39 225 aa4.02□□□□□ -1.77
CDHR3-213ENST00000488386 C9JCJ5 164 aa4.02□□□□□ -1.77
CDHR3-213ENST00000488386 K7EQD1 137 aa4.02□□□□□ -1.77
CDHR3-213ENST00000488386 NXPH4O95158 308 aa4.02□□□□□ -1.77
CDHR3-213ENST00000488386 IGLV2-11P01706 119 aa4.02□□□□□ -1.77
CDHR3-213ENST00000488386 TCRAP04437 139 aa4.02□□□□□ -1.77
CDHR3-213ENST00000488386 NMBP08949 121 aa4.02□□□□□ -1.77
CDHR3-213ENST00000488386 GIPP09681 153 aaPredicted RBP4.02□□□□□ -1.77
CDHR3-213ENST00000488386 LYPD5Q6UWN5 251 aa4.02□□□□□ -1.77
CDHR3-213ENST00000488386 DPPA3Q6W0C5 159 aa4.02□□□□□ -1.77
CDHR3-213ENST00000488386 SPATA12Q7Z6I5 190 aa4.02□□□□□ -1.77
CDHR3-213ENST00000488386 WFDC10BQ8IUB3 73 aa4.02□□□□□ -1.77
CDHR3-213ENST00000488386 OR2T35Q8NGX2 323 aa4.02□□□□□ -1.77
CDHR3-213ENST00000488386 OR2G3Q8NGZ4 309 aa4.02□□□□□ -1.77
CDHR3-213ENST00000488386 UPK3BQ9BT76 320 aa4.02□□□□□ -1.77
CDHR3-213ENST00000488386 PSG8Q9UQ74 426 aa4.02□□□□□ -1.77
CDHR3-213ENST00000488386 HHLA3Q9XRX5 114 aa4.02□□□□□ -1.77
CDHR3-213ENST00000488386 IGLV5-37A0A075B6J1 123 aa4.01□□□□□ -1.77
CDHR3-213ENST00000488386 TRAV21A0A0B4J279 112 aa4.01□□□□□ -1.77
CDHR3-213ENST00000488386 TRBV7-9A0A0J9YWB2 115 aa4.01□□□□□ -1.77
CDHR3-213ENST00000488386 A0A1B0GV50 99 aa4.01□□□□□ -1.77
CDHR3-213ENST00000488386 H3BNG1 76 aa4.01□□□□□ -1.77
CDHR3-213ENST00000488386 SIVA1O15304 175 aa4.01□□□□□ -1.77
CDHR3-213ENST00000488386 ARPC5O15511 151 aa4.01□□□□□ -1.77
CDHR3-213ENST00000488386 GCGP01275 180 aa4.01□□□□□ -1.77
CDHR3-213ENST00000488386 DNAH10OSP0CZ25 163 aa4.01□□□□□ -1.77
CDHR3-213ENST00000488386 FAM74A1Q5RGS3 127 aa4.01□□□□□ -1.77
CDHR3-213ENST00000488386 OR4C5Q8NGB2 326 aa4.01□□□□□ -1.77
CDHR3-213ENST00000488386 C18orf15Q96N68 181 aa4.01□□□□□ -1.77
CDHR3-213ENST00000488386 PSMG3Q9BT73 122 aaPredicted RBP4.01□□□□□ -1.77
CDHR3-213ENST00000488386 ACTR3CQ9C0K3 210 aaPredicted RBP4.01□□□□□ -1.77
CDHR3-213ENST00000488386 CYTL1Q9NRR1 136 aa4.01□□□□□ -1.77
CDHR3-213ENST00000488386 PRO0255Q9UI72 69 aa4.01□□□□□ -1.77
CDHR3-213ENST00000488386 TNFSF18Q9UNG2 199 aa4.01□□□□□ -1.77
CDHR3-213ENST00000488386 A0A1B0GUV1 79 aa4□□□□□ -1.77
CDHR3-213ENST00000488386 PGPEP1LA6NFU8 196 aa4□□□□□ -1.77
CDHR3-213ENST00000488386 M0R2P5 195 aa4□□□□□ -1.77
CDHR3-213ENST00000488386 CXorf1O96002 111 aa4□□□□□ -1.77
CDHR3-213ENST00000488386 SRIP30626 198 aa4□□□□□ -1.77
CDHR3-213ENST00000488386 FHITP49789 147 aa4□□□□□ -1.77
CDHR3-213ENST00000488386 FLI1Q01543 452 aaPredicted RBP4□□□□□ -1.77
CDHR3-213ENST00000488386 WDR73Q6P4I2 378 aa4□□□□□ -1.77
CDHR3-213ENST00000488386 Q6ZRN7 208 aaPredicted RBP4□□□□□ -1.77
CDHR3-213ENST00000488386 C5orf17Q8NAS9 161 aa4□□□□□ -1.77
CDHR3-213ENST00000488386 INO80EQ8NBZ0 244 aaPredicted RBP4□□□□□ -1.77
CDHR3-213ENST00000488386 SUN5Q8TC36 379 aa4□□□□□ -1.77
CDHR3-213ENST00000488386 RASL10AQ92737 203 aa4□□□□□ -1.77
CDHR3-213ENST00000488386 JPT2Q9H910 190 aa4□□□□□ -1.77
CDHR3-213ENST00000488386 SDF2L1Q9HCN8 221 aa4□□□□□ -1.77
CDHR3-213ENST00000488386 EPDR1Q9UM22 224 aa4□□□□□ -1.77
CDHR3-213ENST00000488386 LENEPQ9Y5L5 61 aa4□□□□□ -1.77
CDHR3-213ENST00000488386 ARL2-SNX15V9GYD0 113 aa4□□□□□ -1.77
CDHR3-213ENST00000488386 TMSB15BA0A087X1C1 80 aa3.99□□□□□ -1.77
CDHR3-213ENST00000488386 BORCS7-ASMTA0A0B4J1R7 106 aa3.99□□□□□ -1.77
CDHR3-213ENST00000488386 TRAV4A0A0B4J268 109 aa3.99□□□□□ -1.77
CDHR3-213ENST00000488386 IGKV3D-20A0A0C4DH25 116 aa3.99□□□□□ -1.77
CDHR3-213ENST00000488386 CTXND1A0A1B0GTU2 59 aa3.99□□□□□ -1.77
CDHR3-213ENST00000488386 GRIFINA4D1Z8 144 aa3.99□□□□□ -1.77
CDHR3-213ENST00000488386 FAM74A7A6NL05 159 aa3.99□□□□□ -1.77
CDHR3-213ENST00000488386 USP17L23D6RBM5 183 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms