RNA–Protein interactions for RNA: ENST00000488320.1

COL17A1-207, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 626 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-207ENST00000488320 TREM1Q9NP99 234 aa5.87□□□□□ -1.47
COL17A1-207ENST00000488320 OR7C2O60412 319 aa5.86□□□□□ -1.47
COL17A1-207ENST00000488320 LINC00694P0DN24 101 aa5.86□□□□□ -1.47
COL17A1-207ENST00000488320 S100A11P31949 105 aa5.86□□□□□ -1.47
COL17A1-207ENST00000488320 PYDC2Q56P42 97 aa5.86□□□□□ -1.47
COL17A1-207ENST00000488320 SPANXN2Q5MJ10 180 aa5.86□□□□□ -1.47
COL17A1-207ENST00000488320 ENHOQ6UWT2 76 aa5.86□□□□□ -1.47
COL17A1-207ENST00000488320 ZFP2Q6ZN57 461 aa5.86□□□□□ -1.47
COL17A1-207ENST00000488320 C14orf178Q8N769 122 aaPredicted RBP5.86□□□□□ -1.47
COL17A1-207ENST00000488320 C15orf54Q8N8G6 183 aa5.86□□□□□ -1.47
COL17A1-207ENST00000488320 OR2G3Q8NGZ4 309 aa5.86□□□□□ -1.47
COL17A1-207ENST00000488320 CMTM2Q8TAZ6 248 aa5.86□□□□□ -1.47
COL17A1-207ENST00000488320 FXYD5Q96DB9 178 aa5.86□□□□□ -1.47
COL17A1-207ENST00000488320 PARLQ9H300 379 aa5.86□□□□□ -1.47
COL17A1-207ENST00000488320 Q9UF83 564 aa5.86□□□□□ -1.47
COL17A1-207ENST00000488320 MUC2Q02817 5179 aa5.86□□□□□ -1.47
COL17A1-207ENST00000488320 IGHV3-64A0A075B6Q5 118 aa5.85□□□□□ -1.47
COL17A1-207ENST00000488320 A8MWV9 139 aa5.85□□□□□ -1.47
COL17A1-207ENST00000488320 TAAR5O14804 337 aa5.85□□□□□ -1.47
COL17A1-207ENST00000488320 ANGP03950 147 aaKnown RBP5.85□□□□□ -1.47
COL17A1-207ENST00000488320 CHTF8P0CG12 524 aa5.85□□□□□ -1.47
COL17A1-207ENST00000488320 SMIM18P0DKX4 95 aa5.85□□□□□ -1.47
COL17A1-207ENST00000488320 CIRBPQ14011 172 aaKnown RBP5.85□□□□□ -1.47
COL17A1-207ENST00000488320 CHAC2Q8WUX2 184 aa5.85□□□□□ -1.47
COL17A1-207ENST00000488320 PTH2Q96A98 100 aa5.85□□□□□ -1.47
COL17A1-207ENST00000488320 BCL7BQ9BQE9 202 aa5.85□□□□□ -1.47
COL17A1-207ENST00000488320 FAM25EA8MYX2 175 aa5.84□□□□□ -1.47
COL17A1-207ENST00000488320 PVALBP20472 110 aaPredicted RBP5.84□□□□□ -1.47
COL17A1-207ENST00000488320 S100A4P26447 101 aaKnown RBP5.84□□□□□ -1.47
COL17A1-207ENST00000488320 SULT1A1P50225 295 aa5.84□□□□□ -1.47
COL17A1-207ENST00000488320 HBG1P69891 147 aa5.84□□□□□ -1.47
COL17A1-207ENST00000488320 HBG2P69892 147 aa5.84□□□□□ -1.47
COL17A1-207ENST00000488320 SPCS2Q15005 226 aa5.84□□□□□ -1.47
COL17A1-207ENST00000488320 ATP6V1FQ16864 119 aa5.84□□□□□ -1.47
COL17A1-207ENST00000488320 FAM74A1Q5RGS3 127 aa5.84□□□□□ -1.47
COL17A1-207ENST00000488320 GOLT1AQ6ZVE7 132 aa5.84□□□□□ -1.47
COL17A1-207ENST00000488320 STX12Q86Y82 276 aa5.84□□□□□ -1.47
COL17A1-207ENST00000488320 CLRN3Q8NCR9 226 aa5.84□□□□□ -1.47
COL17A1-207ENST00000488320 LINC00479Q96M42 142 aa5.84□□□□□ -1.47
COL17A1-207ENST00000488320 C9orf85Q96MD7 179 aa5.84□□□□□ -1.47
COL17A1-207ENST00000488320 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.83□□□□□ -1.48
COL17A1-207ENST00000488320 hDV102S1A0JD36 115 aa5.83□□□□□ -1.48
COL17A1-207ENST00000488320 UBE2L3P68036 154 aaKnown RBP5.83□□□□□ -1.48
COL17A1-207ENST00000488320 MIAQ16674 131 aa5.83□□□□□ -1.48
COL17A1-207ENST00000488320 SPINK6Q6UWN8 80 aa5.83□□□□□ -1.48
COL17A1-207ENST00000488320 TVP23CQ96ET8 276 aa5.83□□□□□ -1.48
COL17A1-207ENST00000488320 NDFIP1Q9BT67 221 aa5.83□□□□□ -1.48
COL17A1-207ENST00000488320 NPCDR1Q9BY65 106 aa5.83□□□□□ -1.48
COL17A1-207ENST00000488320 AP5S1Q9NUS5 200 aa5.83□□□□□ -1.48
COL17A1-207ENST00000488320 FLVCR2Q9UPI3 526 aa5.83□□□□□ -1.48
COL17A1-207ENST00000488320 FAT4Q6V0I7 4981 aa5.82□□□□□ -1.48
COL17A1-207ENST00000488320 A0A087WWL8 130 aa5.82□□□□□ -1.48
COL17A1-207ENST00000488320 RNASE3P12724 160 aaKnown RBP5.82□□□□□ -1.48
COL17A1-207ENST00000488320 PRR3P79522 188 aaKnown RBP5.82□□□□□ -1.48
COL17A1-207ENST00000488320 TMEM75Q8N9X5 138 aa5.82□□□□□ -1.48
COL17A1-207ENST00000488320 OR10G7Q8NGN6 311 aa5.82□□□□□ -1.48
COL17A1-207ENST00000488320 LYPD6BQ8NI32 183 aa5.82□□□□□ -1.48
COL17A1-207ENST00000488320 SPACA4Q8TDM5 124 aa5.82□□□□□ -1.48
COL17A1-207ENST00000488320 TRIM63Q969Q1 353 aa5.82□□□□□ -1.48
COL17A1-207ENST00000488320 SGK494Q96LW2 274 aa5.82□□□□□ -1.48
COL17A1-207ENST00000488320 SLIRPQ9GZT3 109 aaKnown RBP5.82□□□□□ -1.48
COL17A1-207ENST00000488320 JPT2Q9H910 190 aa5.82□□□□□ -1.48
COL17A1-207ENST00000488320 OTORQ9NRC9 128 aa5.82□□□□□ -1.48
COL17A1-207ENST00000488320 LYRM2Q9NU23 88 aaPredicted RBP5.82□□□□□ -1.48
COL17A1-207ENST00000488320 PLAC8Q9NZF1 115 aa5.82□□□□□ -1.48
COL17A1-207ENST00000488320 C11orf21Q9P2W6 132 aa5.82□□□□□ -1.48
COL17A1-207ENST00000488320 CCSO14618 274 aa5.81□□□□□ -1.48
COL17A1-207ENST00000488320 GCGP01275 180 aa5.81□□□□□ -1.48
COL17A1-207ENST00000488320 S100A10P60903 97 aa5.81□□□□□ -1.48
COL17A1-207ENST00000488320 CNBPP62633 177 aaKnown RBP5.81□□□□□ -1.48
COL17A1-207ENST00000488320 RPL36AP83881 106 aaKnown RBP5.81□□□□□ -1.48
COL17A1-207ENST00000488320 MPV17L2Q567V2 206 aa5.81□□□□□ -1.48
COL17A1-207ENST00000488320 FAM74A4Q5TZK3 123 aa5.81□□□□□ -1.48
COL17A1-207ENST00000488320 CLPSL2Q6UWE3 100 aa5.81□□□□□ -1.48
COL17A1-207ENST00000488320 TMEM252Q8N6L7 170 aa5.81□□□□□ -1.48
COL17A1-207ENST00000488320 THAP6Q8TBB0 222 aa5.81□□□□□ -1.48
COL17A1-207ENST00000488320 DEDD2Q8WXF8 326 aa5.81□□□□□ -1.48
COL17A1-207ENST00000488320 RPL36ALQ969Q0 106 aaKnown RBP5.81□□□□□ -1.48
COL17A1-207ENST00000488320 MBD2Q9UBB5 411 aa5.81□□□□□ -1.48
COL17A1-207ENST00000488320 IGSF23A1L1A6 192 aa5.8□□□□□ -1.48
COL17A1-207ENST00000488320 NDUFB6O95139 128 aa5.8□□□□□ -1.48
COL17A1-207ENST00000488320 ZNF80P51504 273 aaPredicted RBP5.8□□□□□ -1.48
COL17A1-207ENST00000488320 MAJINQ3KP22 176 aa5.8□□□□□ -1.48
COL17A1-207ENST00000488320 CHCHD5Q9BSY4 110 aa5.8□□□□□ -1.48
COL17A1-207ENST00000488320 TRBV6-8A0A0A6YYG3 113 aa5.79□□□□□ -1.48
COL17A1-207ENST00000488320 C17orf112F2Z3M2 114 aa5.79□□□□□ -1.48
COL17A1-207ENST00000488320 H7C1H1 209 aa5.79□□□□□ -1.48
COL17A1-207ENST00000488320 RHODO00212 210 aa5.79□□□□□ -1.48
COL17A1-207ENST00000488320 TCRBP04435 133 aa5.79□□□□□ -1.48
COL17A1-207ENST00000488320 TAS2R45P59539 299 aa5.79□□□□□ -1.48
COL17A1-207ENST00000488320 PKIAP61925 76 aa5.79□□□□□ -1.48
COL17A1-207ENST00000488320 GNG5P63218 68 aa5.79□□□□□ -1.48
COL17A1-207ENST00000488320 ZFP69Q49AA0 526 aa5.79□□□□□ -1.48
COL17A1-207ENST00000488320 SMUG1Q53HV7 270 aa5.79□□□□□ -1.48
COL17A1-207ENST00000488320 KHDC3LQ587J8 217 aa5.79□□□□□ -1.48
COL17A1-207ENST00000488320 UFSP1Q6NVU6 142 aa5.79□□□□□ -1.48
COL17A1-207ENST00000488320 STPG4Q8N801 248 aa5.79□□□□□ -1.48
COL17A1-207ENST00000488320 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.79□□□□□ -1.48
COL17A1-207ENST00000488320 MITD1Q8WV92 249 aa5.79□□□□□ -1.48
COL17A1-207ENST00000488320 MRPS26Q9BYN8 205 aaKnown RBP5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms