RNA–Protein interactions for RNA: ENST00000488249.1

RBM28-207, Transcript of RNA binding motif protein 28, humanhuman

TSL 3

Gene RBM28, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-207ENST00000488249 SETBP1Q9Y6X0 1596 aa1.85□□□□□ -2.11
RBM28-207ENST00000488249 TARBP1Q13395 1621 aaKnown RBP1.85□□□□□ -2.11
RBM28-207ENST00000488249 SHROOM2Q13796 1616 aa1.85□□□□□ -2.11
RBM28-207ENST00000488249 IGLV4-69A0A075B6H9 119 aa1.85□□□□□ -2.11
RBM28-207ENST00000488249 IGKV2-28A0A075B6P5 120 aa1.85□□□□□ -2.11
RBM28-207ENST00000488249 TRBV10-2A0A0K0K1G8 114 aa1.85□□□□□ -2.11
RBM28-207ENST00000488249 TMEM235A6NFC5 223 aa1.85□□□□□ -2.11
RBM28-207ENST00000488249 C5orf67F2Z3F1 127 aa1.85□□□□□ -2.11
RBM28-207ENST00000488249 H3BQ85 93 aa1.85□□□□□ -2.11
RBM28-207ENST00000488249 IGKV2D-28P01615 120 aa1.85□□□□□ -2.11
RBM28-207ENST00000488249 KRTAP10-1P60331 282 aa1.85□□□□□ -2.11
RBM28-207ENST00000488249 CCL8P80075 99 aa1.85□□□□□ -2.11
RBM28-207ENST00000488249 ZNF117Q03924 483 aa1.85□□□□□ -2.11
RBM28-207ENST00000488249 WFDC2Q14508 124 aa1.85□□□□□ -2.11
RBM28-207ENST00000488249 RHOHQ15669 191 aa1.85□□□□□ -2.11
RBM28-207ENST00000488249 SPATA45Q537H7 98 aa1.85□□□□□ -2.11
RBM28-207ENST00000488249 LCE1CQ5T751 118 aa1.85□□□□□ -2.11
RBM28-207ENST00000488249 LCE1BQ5T7P3 118 aa1.85□□□□□ -2.11
RBM28-207ENST00000488249 C1orf134Q5TEV5 83 aa1.85□□□□□ -2.11
RBM28-207ENST00000488249 SPANXN1Q5VSR9 72 aa1.85□□□□□ -2.11
RBM28-207ENST00000488249 Q6ZQT0 140 aa1.85□□□□□ -2.11
RBM28-207ENST00000488249 TMEM105Q8N8V8 129 aa1.85□□□□□ -2.11
RBM28-207ENST00000488249 SPANXA2-OT1Q8N9U9 137 aa1.85□□□□□ -2.11
RBM28-207ENST00000488249 MGST2Q99735 147 aa1.85□□□□□ -2.11
RBM28-207ENST00000488249 SMIM7Q9BQ49 75 aa1.85□□□□□ -2.11
RBM28-207ENST00000488249 NHP2Q9NX24 153 aaKnown RBP1.85□□□□□ -2.11
RBM28-207ENST00000488249 LINC00474Q9P2X8 69 aa1.85□□□□□ -2.11
RBM28-207ENST00000488249 NDUFA12Q9UI09 145 aa1.85□□□□□ -2.11
RBM28-207ENST00000488249 SHANK2Q9UPX8 1470 aa1.85□□□□□ -2.11
RBM28-207ENST00000488249 NYNRINQ9P2P1 1898 aaKnown RBP1.85□□□□□ -2.11
RBM28-207ENST00000488249 GREB1Q4ZG55 1949 aa1.85□□□□□ -2.11
RBM28-207ENST00000488249 TRPM3Q9HCF6 1732 aaPredicted RBP1.85□□□□□ -2.11
RBM28-207ENST00000488249 SCN11AQ9UI33 1791 aa1.85□□□□□ -2.11
RBM28-207ENST00000488249 CFAP74Q9C0B2 1584 aa1.85□□□□□ -2.11
RBM28-207ENST00000488249 ABCA9Q8IUA7 1624 aa1.84□□□□□ -2.11
RBM28-207ENST00000488249 MAP3K4Q9Y6R4 1608 aa1.84□□□□□ -2.11
RBM28-207ENST00000488249 PTPRFP10586 1907 aa1.84□□□□□ -2.11
RBM28-207ENST00000488249 PEAK1Q9H792 1746 aa1.84□□□□□ -2.11
RBM28-207ENST00000488249 NWD2Q9ULI1 1742 aa1.84□□□□□ -2.11
RBM28-207ENST00000488249 MUC21A0A140T8X8 626 aa1.84□□□□□ -2.11
RBM28-207ENST00000488249 HMSDA8MTL9 139 aa1.84□□□□□ -2.11
RBM28-207ENST00000488249 C17orf112F2Z3M2 114 aa1.84□□□□□ -2.11
RBM28-207ENST00000488249 SYS1-DBNDD2H3BUS1 97 aa1.84□□□□□ -2.11
RBM28-207ENST00000488249 H7C2G1 150 aa1.84□□□□□ -2.11
RBM28-207ENST00000488249 CRPP02741 224 aa1.84□□□□□ -2.11
RBM28-207ENST00000488249 MPV17P39210 176 aa1.84□□□□□ -2.11
RBM28-207ENST00000488249 FXYD2P54710 66 aa1.84□□□□□ -2.11
RBM28-207ENST00000488249 ZNF345Q14585 488 aa1.84□□□□□ -2.11
RBM28-207ENST00000488249 NNATQ16517 81 aa1.84□□□□□ -2.11
RBM28-207ENST00000488249 Q1T7F1 81 aa1.84□□□□□ -2.11
RBM28-207ENST00000488249 NMSQ5H8A3 153 aa1.84□□□□□ -2.11
RBM28-207ENST00000488249 HMGN2P46Q86SG4 172 aa1.84□□□□□ -2.11
RBM28-207ENST00000488249 LINC00269Q8N2A0 174 aa1.84□□□□□ -2.11
RBM28-207ENST00000488249 RPRMLQ8N4K4 120 aa1.84□□□□□ -2.11
RBM28-207ENST00000488249 SERP2Q8N6R1 65 aa1.84□□□□□ -2.11
RBM28-207ENST00000488249 DYNLRB2Q8TF09 96 aa1.84□□□□□ -2.11
RBM28-207ENST00000488249 OR8B2Q96RD0 313 aa1.84□□□□□ -2.11
RBM28-207ENST00000488249 CYSTM1Q9H1C7 97 aa1.84□□□□□ -2.11
RBM28-207ENST00000488249 MRPL35Q9NZE8 188 aaKnown RBP1.84□□□□□ -2.11
RBM28-207ENST00000488249 TIMM9Q9Y5J7 89 aa1.84□□□□□ -2.11
RBM28-207ENST00000488249 CABIN1Q9Y6J0 2220 aa1.84□□□□□ -2.11
RBM28-207ENST00000488249 CUX1P39880 1505 aa1.84□□□□□ -2.11
RBM28-207ENST00000488249 LTBP4Q8N2S1 1624 aa1.84□□□□□ -2.12
RBM28-207ENST00000488249 PTPN23Q9H3S7 1636 aa1.84□□□□□ -2.12
RBM28-207ENST00000488249 PTPRDP23468 1912 aa1.83□□□□□ -2.12
RBM28-207ENST00000488249 BLMP54132 1417 aaPredicted RBP1.83□□□□□ -2.12
RBM28-207ENST00000488249 THADAQ6YHU6 1953 aa1.83□□□□□ -2.12
RBM28-207ENST00000488249 SHANK3Q9BYB0 1731 aa1.83□□□□□ -2.12
RBM28-207ENST00000488249 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.83□□□□□ -2.12
RBM28-207ENST00000488249 FANCD2Q9BXW9 1451 aa1.83□□□□□ -2.12
RBM28-207ENST00000488249 DOCK2Q92608 1830 aa1.83□□□□□ -2.12
RBM28-207ENST00000488249 IGKV1D-42A0A075B6H8 117 aa1.83□□□□□ -2.12
RBM28-207ENST00000488249 A0A096LNJ9 63 aa1.83□□□□□ -2.12
RBM28-207ENST00000488249 C11orf86A6NJI1 115 aa1.83□□□□□ -2.12
RBM28-207ENST00000488249 H3BPC8 53 aa1.83□□□□□ -2.12
RBM28-207ENST00000488249 H3BUT2 72 aa1.83□□□□□ -2.12
RBM28-207ENST00000488249 CCL16O15467 120 aa1.83□□□□□ -2.12
RBM28-207ENST00000488249 SIX6O95475 246 aa1.83□□□□□ -2.12
RBM28-207ENST00000488249 RNASE2P10153 161 aaKnown RBP1.83□□□□□ -2.12
RBM28-207ENST00000488249 MGST1P10620 155 aaKnown RBP1.83□□□□□ -2.12
RBM28-207ENST00000488249 KRTDAPP60985 99 aa1.83□□□□□ -2.12
RBM28-207ENST00000488249 GNG11P61952 73 aa1.83□□□□□ -2.12
RBM28-207ENST00000488249 EIF4EBP1Q13541 118 aaPredicted RBP1.83□□□□□ -2.12
RBM28-207ENST00000488249 Q6ZR03 302 aa1.83□□□□□ -2.12
RBM28-207ENST00000488249 OR8B3Q8NGG8 313 aa1.83□□□□□ -2.12
RBM28-207ENST00000488249 TMEM141Q96I45 108 aa1.83□□□□□ -2.12
RBM28-207ENST00000488249 RNF5Q99942 180 aa1.83□□□□□ -2.12
RBM28-207ENST00000488249 FAM215AQ9Y5M1 114 aa1.83□□□□□ -2.12
RBM28-207ENST00000488249 EDC4Q6P2E9 1401 aaKnown RBP1.83□□□□□ -2.12
RBM28-207ENST00000488249 LAMB4A4D0S4 1761 aa1.82□□□□□ -2.12
RBM28-207ENST00000488249 PRXQ9BXM0 1461 aa1.82□□□□□ -2.12
RBM28-207ENST00000488249 PATJQ8NI35 1801 aa1.82□□□□□ -2.12
RBM28-207ENST00000488249 EFCAB5A4FU69 1503 aa1.82□□□□□ -2.12
RBM28-207ENST00000488249 TOP2AP11388 1531 aaKnown RBP1.82□□□□□ -2.12
RBM28-207ENST00000488249 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP1.82□□□□□ -2.12
RBM28-207ENST00000488249 A0A087WXM4 84 aa1.82□□□□□ -2.12
RBM28-207ENST00000488249 TRAV17A0A0B4J275 112 aa1.82□□□□□ -2.12
RBM28-207ENST00000488249 LRCOL1A6NCL2 159 aa1.82□□□□□ -2.12
RBM28-207ENST00000488249 NAP1L6A6NFF2 107 aa1.82□□□□□ -2.12
RBM28-207ENST00000488249 CRYM-AS1A6NIL9 109 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms