RNA–Protein interactions for RNA: ENST00000487890.5

GPNMB-212, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-212ENST00000487890 SPIN2BQ9BPZ2 258 aa2.21□□□□□ -2.06
GPNMB-212ENST00000487890 TMEM126AQ9H061 195 aa2.21□□□□□ -2.06
GPNMB-212ENST00000487890 TMEM222Q9H0R3 208 aa2.21□□□□□ -2.06
GPNMB-212ENST00000487890 OR51E2Q9H255 320 aa2.21□□□□□ -2.06
GPNMB-212ENST00000487890 TXNL4BQ9NX01 149 aaKnown RBP2.21□□□□□ -2.06
GPNMB-212ENST00000487890 TAS2R8Q9NYW2 309 aa2.21□□□□□ -2.06
GPNMB-212ENST00000487890 LAMTOR2Q9Y2Q5 125 aa2.21□□□□□ -2.06
GPNMB-212ENST00000487890 S4R3C0 116 aa2.21□□□□□ -2.06
GPNMB-212ENST00000487890 HUWE1Q7Z6Z7 4374 aaKnown RBP2.21□□□□□ -2.06
GPNMB-212ENST00000487890 SMIM31A0A1B0GVY4 71 aa2.2□□□□□ -2.06
GPNMB-212ENST00000487890 LINC00862A6NCI5 91 aa2.2□□□□□ -2.06
GPNMB-212ENST00000487890 IZUMO1RA6ND01 250 aa2.2□□□□□ -2.06
GPNMB-212ENST00000487890 RBFOX3A6NFN3 312 aa2.2□□□□□ -2.06
GPNMB-212ENST00000487890 C8orf87E5RJ46 101 aa2.2□□□□□ -2.06
GPNMB-212ENST00000487890 NDUFC2-KCTD14E9PQ53 114 aa2.2□□□□□ -2.06
GPNMB-212ENST00000487890 C3orf84H3BNL1 204 aa2.2□□□□□ -2.06
GPNMB-212ENST00000487890 OR2A4O95047 310 aa2.2□□□□□ -2.06
GPNMB-212ENST00000487890 HRASP01112 189 aa2.2□□□□□ -2.06
GPNMB-212ENST00000487890 IGLV1-51P01701 117 aa2.2□□□□□ -2.06
GPNMB-212ENST00000487890 PTHLHP12272 177 aa2.2□□□□□ -2.06
GPNMB-212ENST00000487890 HIST1H1BP16401 226 aaKnown RBP2.2□□□□□ -2.06
GPNMB-212ENST00000487890 NPY1RP25929 384 aa2.2□□□□□ -2.06
GPNMB-212ENST00000487890 SRIP30626 198 aa2.2□□□□□ -2.06
GPNMB-212ENST00000487890 LSM3P62310 102 aaKnown RBP2.2□□□□□ -2.06
GPNMB-212ENST00000487890 RPL30P62888 115 aaKnown RBP2.2□□□□□ -2.06
GPNMB-212ENST00000487890 CATR1Q13166 79 aa2.2□□□□□ -2.06
GPNMB-212ENST00000487890 PMAIP1Q13794 54 aa2.2□□□□□ -2.06
GPNMB-212ENST00000487890 AKR1C8PQ5T2L2 129 aa2.2□□□□□ -2.06
GPNMB-212ENST00000487890 AADACL3Q5VUY0 350 aa2.2□□□□□ -2.06
GPNMB-212ENST00000487890 HRCT1Q6UXD1 115 aa2.2□□□□□ -2.06
GPNMB-212ENST00000487890 CLEC19AQ6UXS0 136 aa2.2□□□□□ -2.06
GPNMB-212ENST00000487890 PCP2Q8IVA1 136 aa2.2□□□□□ -2.06
GPNMB-212ENST00000487890 OR8I2Q8N0Y5 310 aa2.2□□□□□ -2.06
GPNMB-212ENST00000487890 C1orf158Q8N1D5 194 aa2.2□□□□□ -2.06
GPNMB-212ENST00000487890 EXOC3-AS1Q8N2X6 119 aa2.2□□□□□ -2.06
GPNMB-212ENST00000487890 GDPD1Q8N9F7 314 aa2.2□□□□□ -2.06
GPNMB-212ENST00000487890 OR5H2Q8NGV7 314 aa2.2□□□□□ -2.06
GPNMB-212ENST00000487890 VSTM2AQ8TAG5 236 aa2.2□□□□□ -2.06
GPNMB-212ENST00000487890 ZFAND1Q8TCF1 268 aa2.2□□□□□ -2.06
GPNMB-212ENST00000487890 ORAOV1Q8WV07 137 aa2.2□□□□□ -2.06
GPNMB-212ENST00000487890 MBD3L1Q8WWY6 194 aa2.2□□□□□ -2.06
GPNMB-212ENST00000487890 OR2A7Q96R45 310 aa2.2□□□□□ -2.06
GPNMB-212ENST00000487890 NAA38Q9BRA0 125 aaKnown RBP2.2□□□□□ -2.06
GPNMB-212ENST00000487890 PBDC1Q9BVG4 233 aa2.2□□□□□ -2.06
GPNMB-212ENST00000487890 WFDC10AQ9H1F0 79 aa2.2□□□□□ -2.06
GPNMB-212ENST00000487890 SPANXA1Q9NS26 97 aa2.2□□□□□ -2.06
GPNMB-212ENST00000487890 MRPL27Q9P0M9 148 aaKnown RBP2.2□□□□□ -2.06
GPNMB-212ENST00000487890 IGHV3OR16-8A0A075B7F1 116 aa2.19□□□□□ -2.06
GPNMB-212ENST00000487890 IGHV3-21A0A0B4J1V1 117 aa2.19□□□□□ -2.06
GPNMB-212ENST00000487890 TRAV8-6A0A0B4J262 113 aa2.19□□□□□ -2.06
GPNMB-212ENST00000487890 A0A1B0GX51 115 aa2.19□□□□□ -2.06
GPNMB-212ENST00000487890 C2orf70A6NJV1 201 aa2.19□□□□□ -2.06
GPNMB-212ENST00000487890 FABP5P3A8MUU1 101 aa2.19□□□□□ -2.06
GPNMB-212ENST00000487890 A8MWP6 167 aa2.19□□□□□ -2.06
GPNMB-212ENST00000487890 KRBOX1C9JBD0 128 aa2.19□□□□□ -2.06
GPNMB-212ENST00000487890 INMT-MINDY4F8WBC2 141 aa2.19□□□□□ -2.06
GPNMB-212ENST00000487890 MRPS14O60783 128 aaKnown RBP2.19□□□□□ -2.06
GPNMB-212ENST00000487890 SNAPC5O75971 98 aa2.19□□□□□ -2.06
GPNMB-212ENST00000487890 PPYP01298 95 aa2.19□□□□□ -2.06
GPNMB-212ENST00000487890 HLA-DQB1P01920 261 aa2.19□□□□□ -2.06
GPNMB-212ENST00000487890 PMP2P02689 132 aa2.19□□□□□ -2.06
GPNMB-212ENST00000487890 ATP5G1P05496 136 aa2.19□□□□□ -2.06
GPNMB-212ENST00000487890 ORM2P19652 201 aa2.19□□□□□ -2.06
GPNMB-212ENST00000487890 PRSS3P35030 304 aa2.19□□□□□ -2.06
GPNMB-212ENST00000487890 MRPS10P82664 201 aaKnown RBP2.19□□□□□ -2.06
GPNMB-212ENST00000487890 RHEBQ15382 184 aa2.19□□□□□ -2.06
GPNMB-212ENST00000487890 C6orf99Q4VX62 202 aa2.19□□□□□ -2.06
GPNMB-212ENST00000487890 TTC32Q5I0X7 151 aa2.19□□□□□ -2.06
GPNMB-212ENST00000487890 UBE2NLQ5JXB2 153 aa2.19□□□□□ -2.06
GPNMB-212ENST00000487890 TMEM69Q5SWH9 247 aa2.19□□□□□ -2.06
GPNMB-212ENST00000487890 Q6ZS49 121 aa2.19□□□□□ -2.06
GPNMB-212ENST00000487890 ZNF767PQ75MW2 155 aa2.19□□□□□ -2.06
GPNMB-212ENST00000487890 BORCS7Q96B45 105 aa2.19□□□□□ -2.06
GPNMB-212ENST00000487890 S100A16Q96FQ6 103 aaKnown RBP2.19□□□□□ -2.06
GPNMB-212ENST00000487890 FMC1Q96HJ9 113 aa2.19□□□□□ -2.06
GPNMB-212ENST00000487890 KCNS1Q96KK3 526 aa2.19□□□□□ -2.06
GPNMB-212ENST00000487890 GGTLC1Q9BX51 225 aa2.19□□□□□ -2.06
GPNMB-212ENST00000487890 GNB1LQ9BYB4 327 aa2.19□□□□□ -2.06
GPNMB-212ENST00000487890 NKX6-2Q9C056 277 aaPredicted RBP2.19□□□□□ -2.06
GPNMB-212ENST00000487890 COMMD5Q9GZQ3 224 aa2.19□□□□□ -2.06
GPNMB-212ENST00000487890 GTSF1LQ9H1H1 148 aa2.19□□□□□ -2.06
GPNMB-212ENST00000487890 PRO1933Q9H354 126 aa2.19□□□□□ -2.06
GPNMB-212ENST00000487890 ZNF331Q9NQX6 463 aaPredicted RBP2.19□□□□□ -2.06
GPNMB-212ENST00000487890 LYRM2Q9NU23 88 aaPredicted RBP2.19□□□□□ -2.06
GPNMB-212ENST00000487890 MRPL16Q9NX20 251 aaKnown RBP2.19□□□□□ -2.06
GPNMB-212ENST00000487890 KMT2AQ03164 3969 aa2.18□□□□□ -2.06
GPNMB-212ENST00000487890 ALMS1Q8TCU4 4167 aa2.18□□□□□ -2.06
GPNMB-212ENST00000487890 NACAE9PAV3 2078 aa2.18□□□□□ -2.06
GPNMB-212ENST00000487890 IGKV3-7A0A075B6H7 116 aa2.18□□□□□ -2.06
GPNMB-212ENST00000487890 IGLV1-50A0A075B6I6 118 aa2.18□□□□□ -2.06
GPNMB-212ENST00000487890 A0A087WXM4 84 aa2.18□□□□□ -2.06
GPNMB-212ENST00000487890 TRBV7-1A0A0A6YYK4 115 aa2.18□□□□□ -2.06
GPNMB-212ENST00000487890 TRAV3A0A0B4J244 114 aa2.18□□□□□ -2.06
GPNMB-212ENST00000487890 TMEM218A2RU14 115 aa2.18□□□□□ -2.06
GPNMB-212ENST00000487890 OR2T8A6NH00 312 aa2.18□□□□□ -2.06
GPNMB-212ENST00000487890 C9JAW5 83 aa2.18□□□□□ -2.06
GPNMB-212ENST00000487890 E7EUB6 86 aa2.18□□□□□ -2.06
GPNMB-212ENST00000487890 M0R2Z0 102 aa2.18□□□□□ -2.06
GPNMB-212ENST00000487890 PSPHP1O15172 72 aa2.18□□□□□ -2.06
GPNMB-212ENST00000487890 RBFOX2O43251 390 aaKnown RBP eCLIP2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms