RNA–Protein interactions for RNA: ENST00000487719.1

LCN2-205, Transcript of lipocalin 2, humanhuman

TSL 1 (best)

Gene LCN2, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-205ENST00000487719 DNAH1Q9P2D7 4330 aa6.54□□□□□ -1.36
LCN2-205ENST00000487719 IGLV2-18A0A075B6J9 118 aa6.53□□□□□ -1.36
LCN2-205ENST00000487719 A0A1B0GVG6 124 aa6.53□□□□□ -1.36
LCN2-205ENST00000487719 XKRY2A2RUG3 117 aa6.53□□□□□ -1.36
LCN2-205ENST00000487719 RHODO00212 210 aa6.53□□□□□ -1.36
LCN2-205ENST00000487719 SFTA3P0C7M3 94 aa6.53□□□□□ -1.36
LCN2-205ENST00000487719 MGST1P10620 155 aaKnown RBP6.53□□□□□ -1.36
LCN2-205ENST00000487719 CRYBA4P53673 196 aa6.53□□□□□ -1.36
LCN2-205ENST00000487719 CCL20P78556 96 aa6.53□□□□□ -1.36
LCN2-205ENST00000487719 LINC01559Q495D7 138 aa6.53□□□□□ -1.36
LCN2-205ENST00000487719 ZNF506Q5JVG8 444 aa6.53□□□□□ -1.36
LCN2-205ENST00000487719 NEGR1Q7Z3B1 354 aa6.53□□□□□ -1.36
LCN2-205ENST00000487719 ZNF479Q96JC4 524 aa6.53□□□□□ -1.36
LCN2-205ENST00000487719 C11orf21Q9P2W6 132 aa6.53□□□□□ -1.36
LCN2-205ENST00000487719 TMSB15BA0A087X1C1 80 aa6.52□□□□□ -1.37
LCN2-205ENST00000487719 IGKV3D-20A0A0C4DH25 116 aa6.52□□□□□ -1.37
LCN2-205ENST00000487719 KRBOX1C9JBD0 128 aa6.52□□□□□ -1.37
LCN2-205ENST00000487719 M0R2N4 97 aa6.52□□□□□ -1.37
LCN2-205ENST00000487719 RNASE3P12724 160 aaKnown RBP6.52□□□□□ -1.37
LCN2-205ENST00000487719 GYPEP15421 78 aa6.52□□□□□ -1.37
LCN2-205ENST00000487719 NKX2-5P52952 324 aaPredicted RBP6.52□□□□□ -1.37
LCN2-205ENST00000487719 FHL2Q14192 279 aa6.52□□□□□ -1.37
LCN2-205ENST00000487719 RHOHQ15669 191 aa6.52□□□□□ -1.37
LCN2-205ENST00000487719 CENPWQ5EE01 88 aa6.52□□□□□ -1.37
LCN2-205ENST00000487719 LINC00336Q6ZUF6 198 aa6.52□□□□□ -1.37
LCN2-205ENST00000487719 ZFP82Q8N141 532 aa6.52□□□□□ -1.37
LCN2-205ENST00000487719 VSIG2Q96IQ7 327 aa6.52□□□□□ -1.37
LCN2-205ENST00000487719 BOLA1Q9Y3E2 137 aa6.52□□□□□ -1.37
LCN2-205ENST00000487719 KMT2AQ03164 3969 aa6.51□□□□□ -1.37
LCN2-205ENST00000487719 A0A096LPF7 62 aa6.51□□□□□ -1.37
LCN2-205ENST00000487719 GRIFINA4D1Z8 144 aa6.51□□□□□ -1.37
LCN2-205ENST00000487719 RS1O15537 224 aa6.51□□□□□ -1.37
LCN2-205ENST00000487719 CXCL1P09341 107 aa6.51□□□□□ -1.37
LCN2-205ENST00000487719 ARMS2P0C7Q2 107 aa6.51□□□□□ -1.37
LCN2-205ENST00000487719 MED14OSP0DP75 135 aa6.51□□□□□ -1.37
LCN2-205ENST00000487719 RPS20P60866 119 aaKnown RBP6.51□□□□□ -1.37
LCN2-205ENST00000487719 DNLZQ5SXM8 178 aa6.51□□□□□ -1.37
LCN2-205ENST00000487719 CFAP126Q5VTH2 177 aa6.51□□□□□ -1.37
LCN2-205ENST00000487719 ZFP2Q6ZN57 461 aa6.51□□□□□ -1.37
LCN2-205ENST00000487719 EIF5A2Q9GZV4 153 aaKnown RBP6.51□□□□□ -1.37
LCN2-205ENST00000487719 Q9H8V8 135 aa6.51□□□□□ -1.37
LCN2-205ENST00000487719 MRPS16Q9Y3D3 137 aaKnown RBP6.51□□□□□ -1.37
LCN2-205ENST00000487719 LINC00588Q9Y4M8 146 aa6.51□□□□□ -1.37
LCN2-205ENST00000487719 TRAV9-2A0A087WT02 112 aa6.5□□□□□ -1.37
LCN2-205ENST00000487719 TRBV6-4A0A1B0GX49 114 aa6.5□□□□□ -1.37
LCN2-205ENST00000487719 RBFOX3A6NFN3 312 aa6.5□□□□□ -1.37
LCN2-205ENST00000487719 PGPEP1LA6NFU8 196 aa6.5□□□□□ -1.37
LCN2-205ENST00000487719 K7EQD1 137 aa6.5□□□□□ -1.37
LCN2-205ENST00000487719 M0R381 172 aa6.5□□□□□ -1.37
LCN2-205ENST00000487719 P01737 135 aa6.5□□□□□ -1.37
LCN2-205ENST00000487719 GATA1P15976 413 aaPredicted RBP6.5□□□□□ -1.37
LCN2-205ENST00000487719 CRIP1P50238 77 aa6.5□□□□□ -1.37
LCN2-205ENST00000487719 C1orf134Q5TEV5 83 aa6.5□□□□□ -1.37
LCN2-205ENST00000487719 FAM74A4Q5TZK3 123 aa6.5□□□□□ -1.37
LCN2-205ENST00000487719 SPANXN1Q5VSR9 72 aa6.5□□□□□ -1.37
LCN2-205ENST00000487719 UPK3BQ9BT76 320 aa6.5□□□□□ -1.37
LCN2-205ENST00000487719 DERL1Q9BUN8 251 aa6.5□□□□□ -1.37
LCN2-205ENST00000487719 MLST8Q9BVC4 326 aa6.5□□□□□ -1.37
LCN2-205ENST00000487719 IGHV3-73A0A0B4J1V6 119 aa6.49□□□□□ -1.37
LCN2-205ENST00000487719 NBDYA0A0U1RRE5 68 aa6.49□□□□□ -1.37
LCN2-205ENST00000487719 A0A1W2PPQ1 181 aa6.49□□□□□ -1.37
LCN2-205ENST00000487719 TMEM250H0YL14 139 aa6.49□□□□□ -1.37
LCN2-205ENST00000487719 SIVA1O15304 175 aa6.49□□□□□ -1.37
LCN2-205ENST00000487719 SMIM17P0DL12 118 aa6.49□□□□□ -1.37
LCN2-205ENST00000487719 CEBPGP53567 150 aa6.49□□□□□ -1.37
LCN2-205ENST00000487719 ESRGQ1W209 222 aa6.49□□□□□ -1.37
LCN2-205ENST00000487719 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.49□□□□□ -1.37
LCN2-205ENST00000487719 ZNRF2Q8NHG8 242 aa6.49□□□□□ -1.37
LCN2-205ENST00000487719 PARLQ9H300 379 aa6.49□□□□□ -1.37
LCN2-205ENST00000487719 TRAV8-6A0A0B4J262 113 aa6.48□□□□□ -1.37
LCN2-205ENST00000487719 RAB19A4D1S5 217 aa6.48□□□□□ -1.37
LCN2-205ENST00000487719 TOR2AQ5JU69 321 aa6.48□□□□□ -1.37
LCN2-205ENST00000487719 SLC25A29Q8N8R3 303 aa6.48□□□□□ -1.37
LCN2-205ENST00000487719 OR2D3Q8NGH3 330 aa6.48□□□□□ -1.37
LCN2-205ENST00000487719 TPPP3Q9BW30 176 aa6.48□□□□□ -1.37
LCN2-205ENST00000487719 VPS13DQ5THJ4 4388 aa6.48□□□□□ -1.37
LCN2-205ENST00000487719 DNAH6Q9C0G6 4158 aa6.48□□□□□ -1.37
LCN2-205ENST00000487719 K7EP13 123 aa6.47□□□□□ -1.37
LCN2-205ENST00000487719 NDUFS6O75380 124 aaKnown RBP6.47□□□□□ -1.37
LCN2-205ENST00000487719 NXPH4O95158 308 aa6.47□□□□□ -1.37
LCN2-205ENST00000487719 OR5AL1P0C617 328 aa6.47□□□□□ -1.37
LCN2-205ENST00000487719 BTF3P20290 206 aaKnown RBP6.47□□□□□ -1.37
LCN2-205ENST00000487719 EVI2AP22794 236 aa6.47□□□□□ -1.37
LCN2-205ENST00000487719 RPL19P84098 196 aaKnown RBP6.47□□□□□ -1.37
LCN2-205ENST00000487719 DMRTA1Q5VZB9 504 aa6.47□□□□□ -1.37
LCN2-205ENST00000487719 LYPD5Q6UWN5 251 aa6.47□□□□□ -1.37
LCN2-205ENST00000487719 Q6ZR54 194 aa6.47□□□□□ -1.37
LCN2-205ENST00000487719 LYPD6BQ8NI32 183 aa6.47□□□□□ -1.37
LCN2-205ENST00000487719 SFRP2Q96HF1 295 aa6.47□□□□□ -1.37
LCN2-205ENST00000487719 AP1S3Q96PC3 154 aa6.47□□□□□ -1.37
LCN2-205ENST00000487719 SCRT2Q9NQ03 307 aa6.47□□□□□ -1.37
LCN2-205ENST00000487719 LY96Q9Y6Y9 160 aa6.47□□□□□ -1.37
LCN2-205ENST00000487719 F2Z2F3 143 aa6.46□□□□□ -1.38
LCN2-205ENST00000487719 TIRAPP58753 221 aa6.46□□□□□ -1.38
LCN2-205ENST00000487719 CACNG7P62955 275 aa6.46□□□□□ -1.38
LCN2-205ENST00000487719 ZNF56Q15929 161 aa6.46□□□□□ -1.38
LCN2-205ENST00000487719 OR10J3Q5JRS4 329 aa6.46□□□□□ -1.38
LCN2-205ENST00000487719 C6orf223Q8N319 242 aa6.46□□□□□ -1.38
LCN2-205ENST00000487719 C10orf126Q8N4M7 172 aa6.46□□□□□ -1.38
LCN2-205ENST00000487719 FER1L6-AS1Q8NA97 138 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 271.5 ms