RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 OR2G3Q8NGZ4 309 aa8.19□□□□□ -1.1
VPS16-208ENST00000487461 RAB24Q969Q5 203 aa8.19□□□□□ -1.1
VPS16-208ENST00000487461 PSG8Q9UQ74 426 aa8.19□□□□□ -1.1
VPS16-208ENST00000487461 SERTM2A0A1B0GWG4 89 aa8.18□□□□□ -1.1
VPS16-208ENST00000487461 TRBV6-4A0A1B0GX49 114 aa8.18□□□□□ -1.1
VPS16-208ENST00000487461 KANTRA0A1W2PQU2 76 aa8.18□□□□□ -1.1
VPS16-208ENST00000487461 LRCOL1A6NCL2 159 aa8.18□□□□□ -1.1
VPS16-208ENST00000487461 PGPEP1LA6NFU8 196 aa8.18□□□□□ -1.1
VPS16-208ENST00000487461 IBA57-AS1B1ANH7 110 aa8.18□□□□□ -1.1
VPS16-208ENST00000487461 TAAR5O14804 337 aa8.18□□□□□ -1.1
VPS16-208ENST00000487461 BCL2L11O43521 198 aa8.18□□□□□ -1.1
VPS16-208ENST00000487461 IGLV2-11P01706 119 aa8.18□□□□□ -1.1
VPS16-208ENST00000487461 PFN1P07737 140 aaKnown RBP8.18□□□□□ -1.1
VPS16-208ENST00000487461 GCHFRP30047 84 aa8.18□□□□□ -1.1
VPS16-208ENST00000487461 SUMO1P63165 101 aaKnown RBP8.18□□□□□ -1.1
VPS16-208ENST00000487461 LINC01556Q5JQF7 62 aa8.18□□□□□ -1.1
VPS16-208ENST00000487461 TMEM75Q8N9X5 138 aa8.18□□□□□ -1.1
VPS16-208ENST00000487461 C5orf17Q8NAS9 161 aa8.18□□□□□ -1.1
VPS16-208ENST00000487461 C9orf85Q96MD7 179 aa8.18□□□□□ -1.1
VPS16-208ENST00000487461 NDFIP1Q9BT67 221 aa8.18□□□□□ -1.1
VPS16-208ENST00000487461 EPDR1Q9UM22 224 aa8.18□□□□□ -1.1
VPS16-208ENST00000487461 FAT1Q14517 4588 aa8.18□□□□□ -1.1
VPS16-208ENST00000487461 TRAV8-6A0A0B4J262 113 aa8.17□□□□□ -1.1
VPS16-208ENST00000487461 CIDEAO60543 219 aa8.17□□□□□ -1.1
VPS16-208ENST00000487461 GCGP01275 180 aa8.17□□□□□ -1.1
VPS16-208ENST00000487461 SMR3BP02814 79 aaPredicted RBP8.17□□□□□ -1.1
VPS16-208ENST00000487461 ATP6V0CP27449 155 aa8.17□□□□□ -1.1
VPS16-208ENST00000487461 Q5VSD8 79 aa8.17□□□□□ -1.1
VPS16-208ENST00000487461 INO80EQ8NBZ0 244 aaPredicted RBP8.17□□□□□ -1.1
VPS16-208ENST00000487461 STOML3Q8TAV4 291 aa8.17□□□□□ -1.1
VPS16-208ENST00000487461 PTH2Q96A98 100 aa8.17□□□□□ -1.1
VPS16-208ENST00000487461 PRADC1Q9BSG0 188 aa8.17□□□□□ -1.1
VPS16-208ENST00000487461 GGTLC3B5MD39 225 aa8.16□□□□□ -1.1
VPS16-208ENST00000487461 K7EQM0 130 aa8.16□□□□□ -1.1
VPS16-208ENST00000487461 PSCAO43653 123 aa8.16□□□□□ -1.1
VPS16-208ENST00000487461 IGHV3-30P01768 117 aa8.16□□□□□ -1.1
VPS16-208ENST00000487461 IGHV3-33P01772 117 aa8.16□□□□□ -1.1
VPS16-208ENST00000487461 IGHV3-30-3P0DP02 117 aa8.16□□□□□ -1.1
VPS16-208ENST00000487461 IGHV3-30-5P0DP03 117 aa8.16□□□□□ -1.1
VPS16-208ENST00000487461 RNASE3P12724 160 aaKnown RBP8.16□□□□□ -1.1
VPS16-208ENST00000487461 FLI1Q01543 452 aaPredicted RBP8.16□□□□□ -1.1
VPS16-208ENST00000487461 RHOHQ15669 191 aa8.16□□□□□ -1.1
VPS16-208ENST00000487461 OR10J3Q5JRS4 329 aa8.16□□□□□ -1.1
VPS16-208ENST00000487461 ZNF506Q5JVG8 444 aa8.16□□□□□ -1.1
VPS16-208ENST00000487461 Q6ZSN1 163 aa8.16□□□□□ -1.1
VPS16-208ENST00000487461 PRNTQ86SH4 94 aa8.16□□□□□ -1.1
VPS16-208ENST00000487461 AQP10Q96PS8 301 aa8.16□□□□□ -1.1
VPS16-208ENST00000487461 PSMG3Q9BT73 122 aaPredicted RBP8.16□□□□□ -1.1
VPS16-208ENST00000487461 SH3BGRL3Q9H299 93 aa8.16□□□□□ -1.1
VPS16-208ENST00000487461 IGLV5-52A0A0A0MRZ9 124 aa8.15□□□□□ -1.1
VPS16-208ENST00000487461 MBP02144 154 aa8.15□□□□□ -1.1
VPS16-208ENST00000487461 HAMPP81172 84 aa8.15□□□□□ -1.1
VPS16-208ENST00000487461 SERF2P84101 59 aa8.15□□□□□ -1.1
VPS16-208ENST00000487461 SMUG1Q53HV7 270 aa8.15□□□□□ -1.1
VPS16-208ENST00000487461 LELP1Q5T871 98 aa8.15□□□□□ -1.1
VPS16-208ENST00000487461 FRZBQ92765 325 aa8.15□□□□□ -1.1
VPS16-208ENST00000487461 LINC00479Q96M42 142 aa8.15□□□□□ -1.1
VPS16-208ENST00000487461 ACTR3CQ9C0K3 210 aaPredicted RBP8.15□□□□□ -1.1
VPS16-208ENST00000487461 GTSF1LQ9H1H1 148 aa8.15□□□□□ -1.1
VPS16-208ENST00000487461 Q9HAA7 133 aa8.15□□□□□ -1.1
VPS16-208ENST00000487461 TMEM167BQ9NRX6 74 aa8.15□□□□□ -1.1
VPS16-208ENST00000487461 TRAV34A0A0B4J273 112 aa8.14□□□□□ -1.11
VPS16-208ENST00000487461 IGKV3D-20A0A0C4DH25 116 aa8.14□□□□□ -1.11
VPS16-208ENST00000487461 CXorf1O96002 111 aa8.14□□□□□ -1.11
VPS16-208ENST00000487461 EIF5AP63241 154 aaKnown RBP8.14□□□□□ -1.11
VPS16-208ENST00000487461 SAPCD1Q5SSQ6 148 aa8.14□□□□□ -1.11
VPS16-208ENST00000487461 UQCC3Q6UW78 93 aa8.14□□□□□ -1.11
VPS16-208ENST00000487461 ALKAL2Q6UX46 152 aa8.14□□□□□ -1.11
VPS16-208ENST00000487461 CYB561D1Q8N8Q1 229 aa8.14□□□□□ -1.11
VPS16-208ENST00000487461 ATP6V0E2Q8NHE4 81 aa8.14□□□□□ -1.11
VPS16-208ENST00000487461 VPS13BQ7Z7G8 4022 aa8.13□□□□□ -1.11
VPS16-208ENST00000487461 RAB19A4D1S5 217 aa8.13□□□□□ -1.11
VPS16-208ENST00000487461 TEX46H3BTG2 121 aa8.13□□□□□ -1.11
VPS16-208ENST00000487461 MGST1P10620 155 aaKnown RBP8.13□□□□□ -1.11
VPS16-208ENST00000487461 Q8N814 137 aa8.13□□□□□ -1.11
VPS16-208ENST00000487461 NTN5Q8WTR8 489 aaPredicted RBP8.13□□□□□ -1.11
VPS16-208ENST00000487461 Q9UF83 564 aa8.13□□□□□ -1.11
VPS16-208ENST00000487461 A0A1W2PRE2 83 aa8.12□□□□□ -1.11
VPS16-208ENST00000487461 TPT1P13693 172 aaKnown RBP8.12□□□□□ -1.11
VPS16-208ENST00000487461 ZNF726P1Q15940 193 aa8.12□□□□□ -1.11
VPS16-208ENST00000487461 RPL7L1Q6DKI1 246 aaKnown RBP8.12□□□□□ -1.11
VPS16-208ENST00000487461 Q8N3U1 123 aa8.12□□□□□ -1.11
VPS16-208ENST00000487461 PARLQ9H300 379 aa8.12□□□□□ -1.11
VPS16-208ENST00000487461 JPT2Q9H910 190 aa8.12□□□□□ -1.11
VPS16-208ENST00000487461 FAM30AQ9NZY2 134 aa8.12□□□□□ -1.11
VPS16-208ENST00000487461 FLG2Q5D862 2391 aaPredicted RBP8.12□□□□□ -1.11
VPS16-208ENST00000487461 GAGE12JA6NER3 117 aa8.11□□□□□ -1.11
VPS16-208ENST00000487461 FABP5P3A8MUU1 101 aa8.11□□□□□ -1.11
VPS16-208ENST00000487461 LINC00694P0DN24 101 aa8.11□□□□□ -1.11
VPS16-208ENST00000487461 S100A4P26447 101 aaKnown RBP8.11□□□□□ -1.11
VPS16-208ENST00000487461 GAGE1Q13065 139 aa8.11□□□□□ -1.11
VPS16-208ENST00000487461 GAGE4Q13068 117 aa8.11□□□□□ -1.11
VPS16-208ENST00000487461 GAGE5Q13069 117 aa8.11□□□□□ -1.11
VPS16-208ENST00000487461 GAGE13Q4V321 117 aa8.11□□□□□ -1.11
VPS16-208ENST00000487461 EIF5AL1Q6IS14 154 aaKnown RBP8.11□□□□□ -1.11
VPS16-208ENST00000487461 UFSP1Q6NVU6 142 aa8.11□□□□□ -1.11
VPS16-208ENST00000487461 ZFP2Q6ZN57 461 aa8.11□□□□□ -1.11
VPS16-208ENST00000487461 TMEM70Q9BUB7 260 aa8.11□□□□□ -1.11
VPS16-208ENST00000487461 ZNF471Q9BX82 626 aaPredicted RBP8.11□□□□□ -1.11
VPS16-208ENST00000487461 SAMD10Q9BYL1 202 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms