RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 OR5I1Q13606 314 aa7.99□□□□□ -1.13
TRIM56-204ENST00000487252 TXN2Q99757 166 aa7.99□□□□□ -1.13
TRIM56-204ENST00000487252 FAM30AQ9NZY2 134 aa7.99□□□□□ -1.13
TRIM56-204ENST00000487252 RNF24Q9Y225 148 aa7.99□□□□□ -1.13
TRIM56-204ENST00000487252 TRAPPC1Q9Y5R8 145 aa7.99□□□□□ -1.13
TRIM56-204ENST00000487252 XKRY2A2RUG3 117 aa7.98□□□□□ -1.13
TRIM56-204ENST00000487252 PGPA6NDG6 321 aa7.98□□□□□ -1.13
TRIM56-204ENST00000487252 H3BMM0 161 aa7.98□□□□□ -1.13
TRIM56-204ENST00000487252 MRPS12O15235 138 aaKnown RBP7.98□□□□□ -1.13
TRIM56-204ENST00000487252 SLC25A5P05141 298 aaKnown RBP7.98□□□□□ -1.13
TRIM56-204ENST00000487252 MFAP4P55083 255 aa7.98□□□□□ -1.13
TRIM56-204ENST00000487252 RANP62826 216 aaKnown RBP7.98□□□□□ -1.13
TRIM56-204ENST00000487252 RPL11P62913 178 aaKnown RBP7.98□□□□□ -1.13
TRIM56-204ENST00000487252 ZNF600Q6ZNG1 722 aa7.98□□□□□ -1.13
TRIM56-204ENST00000487252 BAGE2Q86Y30 109 aa7.98□□□□□ -1.13
TRIM56-204ENST00000487252 RNF125Q96EQ8 232 aa7.98□□□□□ -1.13
TRIM56-204ENST00000487252 FMC1Q96HJ9 113 aa7.98□□□□□ -1.13
TRIM56-204ENST00000487252 LINC00479Q96M42 142 aa7.98□□□□□ -1.13
TRIM56-204ENST00000487252 HIST1H2BLQ99880 126 aa7.98□□□□□ -1.13
TRIM56-204ENST00000487252 MLST8Q9BVC4 326 aa7.98□□□□□ -1.13
TRIM56-204ENST00000487252 ZNF492Q9P255 531 aa7.98□□□□□ -1.13
TRIM56-204ENST00000487252 FAT4Q6V0I7 4981 aa7.97□□□□□ -1.13
TRIM56-204ENST00000487252 LTAP01374 205 aa7.97□□□□□ -1.13
TRIM56-204ENST00000487252 TCRAP04437 139 aa7.97□□□□□ -1.13
TRIM56-204ENST00000487252 IGLC2P0DOY2 106 aa7.97□□□□□ -1.13
TRIM56-204ENST00000487252 GNG5P63218 68 aa7.97□□□□□ -1.13
TRIM56-204ENST00000487252 Q56UQ5 140 aa7.97□□□□□ -1.13
TRIM56-204ENST00000487252 PYY3Q5JQD4 70 aa7.97□□□□□ -1.13
TRIM56-204ENST00000487252 IBA57Q5T440 356 aaKnown RBP7.97□□□□□ -1.13
TRIM56-204ENST00000487252 OR10D4PQ8NGN7 298 aa7.97□□□□□ -1.13
TRIM56-204ENST00000487252 GPR82Q96P67 336 aa7.97□□□□□ -1.13
TRIM56-204ENST00000487252 GNB1LQ9BYB4 327 aa7.97□□□□□ -1.13
TRIM56-204ENST00000487252 RNASE7Q9H1E1 156 aaKnown RBP7.97□□□□□ -1.13
TRIM56-204ENST00000487252 TRBV19A0A075B6N1 114 aa7.96□□□□□ -1.14
TRIM56-204ENST00000487252 TRAV34A0A0B4J273 112 aa7.96□□□□□ -1.14
TRIM56-204ENST00000487252 IGHV3-66A0A0C4DH42 116 aa7.96□□□□□ -1.14
TRIM56-204ENST00000487252 GATCO43716 136 aaKnown RBP7.96□□□□□ -1.14
TRIM56-204ENST00000487252 MT-ND6P03923 174 aa7.96□□□□□ -1.14
TRIM56-204ENST00000487252 MT1HL1P0DM35 61 aa7.96□□□□□ -1.14
TRIM56-204ENST00000487252 RPL19P84098 196 aaKnown RBP7.96□□□□□ -1.14
TRIM56-204ENST00000487252 WDR73Q6P4I2 378 aa7.96□□□□□ -1.14
TRIM56-204ENST00000487252 RASL11AQ6T310 242 aa7.96□□□□□ -1.14
TRIM56-204ENST00000487252 S100A7AQ86SG5 101 aa7.96□□□□□ -1.14
TRIM56-204ENST00000487252 BPIFA4PQ86YQ2 179 aa7.96□□□□□ -1.14
TRIM56-204ENST00000487252 OR8I2Q8N0Y5 310 aa7.96□□□□□ -1.14
TRIM56-204ENST00000487252 BLNKQ8WV28 456 aa7.96□□□□□ -1.14
TRIM56-204ENST00000487252 NIT2Q9NQR4 276 aa7.96□□□□□ -1.14
TRIM56-204ENST00000487252 GSN-AS1Q9NRJ2 163 aa7.96□□□□□ -1.14
TRIM56-204ENST00000487252 MRPS16Q9Y3D3 137 aaKnown RBP7.96□□□□□ -1.14
TRIM56-204ENST00000487252 IGHV3OR16-12A0A075B7B8 117 aa7.95□□□□□ -1.14
TRIM56-204ENST00000487252 GNG7O60262 68 aa7.95□□□□□ -1.14
TRIM56-204ENST00000487252 IGLV2-11P01706 119 aa7.95□□□□□ -1.14
TRIM56-204ENST00000487252 MGST1P10620 155 aaKnown RBP7.95□□□□□ -1.14
TRIM56-204ENST00000487252 ESDP10768 282 aa7.95□□□□□ -1.14
TRIM56-204ENST00000487252 FABP4P15090 132 aa7.95□□□□□ -1.14
TRIM56-204ENST00000487252 ESRGQ1W209 222 aa7.95□□□□□ -1.14
TRIM56-204ENST00000487252 CT83Q5H943 113 aa7.95□□□□□ -1.14
TRIM56-204ENST00000487252 TOMM20LQ6UXN7 152 aa7.95□□□□□ -1.14
TRIM56-204ENST00000487252 TMEM136Q6ZRR5 245 aa7.95□□□□□ -1.14
TRIM56-204ENST00000487252 ARL6IP6Q8N6S5 226 aa7.95□□□□□ -1.14
TRIM56-204ENST00000487252 NUDT10Q8NFP7 164 aa7.95□□□□□ -1.14
TRIM56-204ENST00000487252 NUDT11Q96G61 164 aa7.95□□□□□ -1.14
TRIM56-204ENST00000487252 PACRGQ96M98 296 aaPredicted RBP7.95□□□□□ -1.14
TRIM56-204ENST00000487252 MRPL18Q9H0U6 180 aaKnown RBP7.95□□□□□ -1.14
TRIM56-204ENST00000487252 ZFAND3Q9H8U3 227 aa7.95□□□□□ -1.14
TRIM56-204ENST00000487252 C19orf71A6NCJ1 209 aa7.94□□□□□ -1.14
TRIM56-204ENST00000487252 PCP4L1A6NKN8 68 aa7.94□□□□□ -1.14
TRIM56-204ENST00000487252 ZNF705GA8MUZ8 300 aaPredicted RBP7.94□□□□□ -1.14
TRIM56-204ENST00000487252 F5H768 121 aa7.94□□□□□ -1.14
TRIM56-204ENST00000487252 SCGB2A1O75556 95 aa7.94□□□□□ -1.14
TRIM56-204ENST00000487252 IL4P05112 153 aa7.94□□□□□ -1.14
TRIM56-204ENST00000487252 UBE2G1P62253 170 aa7.94□□□□□ -1.14
TRIM56-204ENST00000487252 Q0VG73 95 aa7.94□□□□□ -1.14
TRIM56-204ENST00000487252 PDE6HQ13956 83 aa7.94□□□□□ -1.14
TRIM56-204ENST00000487252 PDZD11Q5EBL8 140 aa7.94□□□□□ -1.14
TRIM56-204ENST00000487252 PSMG4Q5JS54 123 aa7.94□□□□□ -1.14
TRIM56-204ENST00000487252 C16orf54Q6UWD8 224 aa7.94□□□□□ -1.14
TRIM56-204ENST00000487252 SIGLEC15Q6ZMC9 328 aa7.94□□□□□ -1.14
TRIM56-204ENST00000487252 Q86TA4 180 aa7.94□□□□□ -1.14
TRIM56-204ENST00000487252 TSKUQ8WUA8 353 aa7.94□□□□□ -1.14
TRIM56-204ENST00000487252 LYRM9A8MSI8 78 aa7.93□□□□□ -1.14
TRIM56-204ENST00000487252 HLA-DRB4P13762 266 aa7.93□□□□□ -1.14
TRIM56-204ENST00000487252 JOSD1Q15040 202 aaPredicted RBP7.93□□□□□ -1.14
TRIM56-204ENST00000487252 Q6ZSA8 131 aa7.93□□□□□ -1.14
TRIM56-204ENST00000487252 C1orf158Q8N1D5 194 aa7.93□□□□□ -1.14
TRIM56-204ENST00000487252 NHLRC2Q8NBF2 726 aa7.93□□□□□ -1.14
TRIM56-204ENST00000487252 TP53TG3Q9ULZ0 132 aa7.93□□□□□ -1.14
TRIM56-204ENST00000487252 TNFRSF18Q9Y5U5 241 aa7.93□□□□□ -1.14
TRIM56-204ENST00000487252 HLA-DRB4X5D2U9 266 aa7.93□□□□□ -1.14
TRIM56-204ENST00000487252 SNURFLB1AK76 121 aa7.92□□□□□ -1.14
TRIM56-204ENST00000487252 NPIPB6E9PJ23 425 aa7.92□□□□□ -1.14
TRIM56-204ENST00000487252 H3BTX0 84 aa7.92□□□□□ -1.14
TRIM56-204ENST00000487252 ZNF253O75346 499 aa7.92□□□□□ -1.14
TRIM56-204ENST00000487252 HLA-DQA1P01909 254 aa7.92□□□□□ -1.14
TRIM56-204ENST00000487252 SNRPCP09234 159 aaKnown RBP7.92□□□□□ -1.14
TRIM56-204ENST00000487252 S100A7P31151 101 aa7.92□□□□□ -1.14
TRIM56-204ENST00000487252 LINC00310P59036 64 aa7.92□□□□□ -1.14
TRIM56-204ENST00000487252 TMEM75Q8N9X5 138 aa7.92□□□□□ -1.14
TRIM56-204ENST00000487252 TMEM18Q96B42 140 aa7.92□□□□□ -1.14
TRIM56-204ENST00000487252 CLUHP3Q96NS8 147 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms