RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 ATP10BO94823 1461 aa0.86□□□□□ -2.27
SMC4-218ENST00000486711 ZNF518AQ6AHZ1 1483 aa0.86□□□□□ -2.27
SMC4-218ENST00000486711 MAGI2Q86UL8 1455 aa0.86□□□□□ -2.27
SMC4-218ENST00000486711 CASZ1Q86V15 1759 aa0.86□□□□□ -2.27
SMC4-218ENST00000486711 MAPKBP1O60336 1514 aa0.86□□□□□ -2.27
SMC4-218ENST00000486711 PTPRDP23468 1912 aa0.86□□□□□ -2.27
SMC4-218ENST00000486711 TRAV36DV7A0A075B6V5 113 aa0.86□□□□□ -2.27
SMC4-218ENST00000486711 A0A1B0GX51 115 aa0.86□□□□□ -2.27
SMC4-218ENST00000486711 H3BQF6 201 aa0.86□□□□□ -2.27
SMC4-218ENST00000486711 CDC42EP2O14613 210 aa0.86□□□□□ -2.27
SMC4-218ENST00000486711 DEGS1O15121 323 aa0.86□□□□□ -2.27
SMC4-218ENST00000486711 TCRAP04437 139 aa0.86□□□□□ -2.27
SMC4-218ENST00000486711 SLC25A5P05141 298 aaKnown RBP0.86□□□□□ -2.27
SMC4-218ENST00000486711 KDELR1P24390 212 aa0.86□□□□□ -2.27
SMC4-218ENST00000486711 ZNF137PP52743 207 aa0.86□□□□□ -2.27
SMC4-218ENST00000486711 SNRPFP62306 86 aaKnown RBP0.86□□□□□ -2.27
SMC4-218ENST00000486711 RHOHQ15669 191 aa0.86□□□□□ -2.27
SMC4-218ENST00000486711 WHAMMP3Q1A5X7 153 aa0.86□□□□□ -2.27
SMC4-218ENST00000486711 HSD17B12Q53GQ0 312 aa0.86□□□□□ -2.27
SMC4-218ENST00000486711 MRPL35Q9NZE8 188 aaKnown RBP0.86□□□□□ -2.27
SMC4-218ENST00000486711 JPT1Q9UK76 154 aa0.86□□□□□ -2.27
SMC4-218ENST00000486711 NAIPQ13075 1403 aa0.86□□□□□ -2.27
SMC4-218ENST00000486711 TTC37Q6PGP7 1564 aa0.86□□□□□ -2.27
SMC4-218ENST00000486711 ZGRF1Q86YA3 2104 aa0.86□□□□□ -2.27
SMC4-218ENST00000486711 FANCMQ8IYD8 2048 aa0.86□□□□□ -2.27
SMC4-218ENST00000486711 A2ML1A8K2U0 1454 aa0.86□□□□□ -2.27
SMC4-218ENST00000486711 FANCAO15360 1455 aa0.86□□□□□ -2.27
SMC4-218ENST00000486711 ATP7BP35670 1465 aa0.86□□□□□ -2.27
SMC4-218ENST00000486711 CDK12Q9NYV4 1490 aaPredicted RBP0.86□□□□□ -2.27
SMC4-218ENST00000486711 USP32Q8NFA0 1604 aa0.86□□□□□ -2.27
SMC4-218ENST00000486711 RNF17Q9BXT8 1623 aaKnown RBP0.86□□□□□ -2.27
SMC4-218ENST00000486711 FBN2P35556 2912 aa0.85□□□□□ -2.27
SMC4-218ENST00000486711 ATP7AQ04656 1500 aa0.85□□□□□ -2.27
SMC4-218ENST00000486711 NEXMIFQ5QGS0 1516 aa0.85□□□□□ -2.27
SMC4-218ENST00000486711 USP54Q70EL1 1684 aa0.85□□□□□ -2.27
SMC4-218ENST00000486711 NOTCH1P46531 2555 aa0.85□□□□□ -2.27
SMC4-218ENST00000486711 UQCRHLA0A096LP55 91 aa0.85□□□□□ -2.27
SMC4-218ENST00000486711 OVOS2A0A0J9YW53 1432 aa0.85□□□□□ -2.27
SMC4-218ENST00000486711 UNC13BO14795 1591 aa0.85□□□□□ -2.27
SMC4-218ENST00000486711 ABCC5O15440 1437 aa0.85□□□□□ -2.27
SMC4-218ENST00000486711 TPST1O60507 370 aa0.85□□□□□ -2.27
SMC4-218ENST00000486711 IGF2P01344 180 aa0.85□□□□□ -2.27
SMC4-218ENST00000486711 UQCRHP07919 91 aa0.85□□□□□ -2.27
SMC4-218ENST00000486711 CMPK1P30085 196 aa0.85□□□□□ -2.27
SMC4-218ENST00000486711 COPZ1P61923 177 aa0.85□□□□□ -2.27
SMC4-218ENST00000486711 OR8B8Q15620 311 aa0.85□□□□□ -2.27
SMC4-218ENST00000486711 OVOS2Q6IE36 1432 aa0.85□□□□□ -2.27
SMC4-218ENST00000486711 NRKQ7Z2Y5 1582 aa0.85□□□□□ -2.27
SMC4-218ENST00000486711 PLAC4Q8WY50 150 aa0.85□□□□□ -2.27
SMC4-218ENST00000486711 C10orf95Q9H7T3 257 aa0.85□□□□□ -2.27
SMC4-218ENST00000486711 MYO5CQ9NQX4 1742 aa0.85□□□□□ -2.27
SMC4-218ENST00000486711 UGGT1Q9NYU2 1555 aa0.85□□□□□ -2.27
SMC4-218ENST00000486711 COMMD3Q9UBI1 195 aa0.85□□□□□ -2.27
SMC4-218ENST00000486711 PAIP2BQ9ULR5 123 aaKnown RBP0.85□□□□□ -2.27
SMC4-218ENST00000486711 UNC13AQ9UPW8 1703 aa0.85□□□□□ -2.27
SMC4-218ENST00000486711 IQGAP3Q86VI3 1631 aa0.85□□□□□ -2.27
SMC4-218ENST00000486711 MROH1Q8NDA8 1641 aa0.85□□□□□ -2.27
SMC4-218ENST00000486711 ERVK-7P63135 1459 aa0.85□□□□□ -2.27
SMC4-218ENST00000486711 MRC2Q9UBG0 1479 aa0.85□□□□□ -2.27
SMC4-218ENST00000486711 MROH2AA6NES4 1674 aa0.84□□□□□ -2.27
SMC4-218ENST00000486711 NFAT5O94916 1531 aa0.84□□□□□ -2.27
SMC4-218ENST00000486711 ZFYVE16Q7Z3T8 1539 aa0.84□□□□□ -2.27
SMC4-218ENST00000486711 LMTK2Q8IWU2 1503 aa0.84□□□□□ -2.27
SMC4-218ENST00000486711 CEP152O94986 1710 aa0.84□□□□□ -2.27
SMC4-218ENST00000486711 KDM5CP41229 1560 aa0.84□□□□□ -2.27
SMC4-218ENST00000486711 CDC42BPGQ6DT37 1551 aa0.84□□□□□ -2.27
SMC4-218ENST00000486711 ZNF609O15014 1411 aa0.84□□□□□ -2.27
SMC4-218ENST00000486711 CPSF1Q10570 1443 aaKnown RBP0.84□□□□□ -2.27
SMC4-218ENST00000486711 EDC4Q6P2E9 1401 aaKnown RBP0.84□□□□□ -2.27
SMC4-218ENST00000486711 NCOA3Q9Y6Q9 1424 aa0.84□□□□□ -2.27
SMC4-218ENST00000486711 A0A0G2JMM0 328 aa0.84□□□□□ -2.27
SMC4-218ENST00000486711 HIGD1CA8MV81 97 aa0.84□□□□□ -2.27
SMC4-218ENST00000486711 MIF4GDA9UHW6 222 aaKnown RBP0.84□□□□□ -2.27
SMC4-218ENST00000486711 IL7P13232 177 aa0.84□□□□□ -2.27
SMC4-218ENST00000486711 EVI2AP22794 236 aa0.84□□□□□ -2.27
SMC4-218ENST00000486711 S100A1P23297 94 aa0.84□□□□□ -2.27
SMC4-218ENST00000486711 SDC4P31431 198 aa0.84□□□□□ -2.27
SMC4-218ENST00000486711 ARPC4P59998 168 aa0.84□□□□□ -2.27
SMC4-218ENST00000486711 CCDC153Q494R4 210 aa0.84□□□□□ -2.27
SMC4-218ENST00000486711 C6orf52Q5T4I8 152 aa0.84□□□□□ -2.27
SMC4-218ENST00000486711 AKAP14Q86UN6 197 aa0.84□□□□□ -2.27
SMC4-218ENST00000486711 CTAGE3PQ8IX95 158 aa0.84□□□□□ -2.27
SMC4-218ENST00000486711 PYDC1Q8WXC3 89 aa0.84□□□□□ -2.27
SMC4-218ENST00000486711 MAGOHBQ96A72 148 aaKnown RBP0.84□□□□□ -2.27
SMC4-218ENST00000486711 TSC22D3Q99576 134 aa0.84□□□□□ -2.27
SMC4-218ENST00000486711 AIF1LQ9BQI0 150 aa0.84□□□□□ -2.27
SMC4-218ENST00000486711 METTL1Q9UBP6 276 aaKnown RBP0.84□□□□□ -2.27
SMC4-218ENST00000486711 AP4S1Q9Y587 144 aa0.84□□□□□ -2.27
SMC4-218ENST00000486711 KIAA0556O60303 1618 aa0.84□□□□□ -2.28
SMC4-218ENST00000486711 CLTCL1P53675 1640 aa0.84□□□□□ -2.28
SMC4-218ENST00000486711 PZPP20742 1482 aa0.84□□□□□ -2.28
SMC4-218ENST00000486711 ABCC10Q5T3U5 1492 aa0.84□□□□□ -2.28
SMC4-218ENST00000486711 MLH3Q9UHC1 1453 aa0.84□□□□□ -2.28
SMC4-218ENST00000486711 SPEF2Q9C093 1822 aa0.84□□□□□ -2.28
SMC4-218ENST00000486711 TET3O43151 1660 aa0.84□□□□□ -2.28
SMC4-218ENST00000486711 LMO7Q8WWI1 1683 aa0.84□□□□□ -2.28
SMC4-218ENST00000486711 CPS1P31327 1500 aa0.84□□□□□ -2.28
SMC4-218ENST00000486711 EFCAB6Q5THR3 1501 aa0.84□□□□□ -2.28
SMC4-218ENST00000486711 ITSN1Q15811 1721 aa0.84□□□□□ -2.28
SMC4-218ENST00000486711 DIP2AQ14689 1571 aa0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms