RNA–Protein interactions for RNA: ENST00000485901.1

HLA-DOA-204, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-204ENST00000485901 BCL2P10415 239 aa8.35□□□□□ -1.07
HLA-DOA-204ENST00000485901 ASIPP42127 132 aa8.35□□□□□ -1.07
HLA-DOA-204ENST00000485901 RPL35P42766 123 aaKnown RBP8.35□□□□□ -1.07
HLA-DOA-204ENST00000485901 CCL18P55774 89 aa8.35□□□□□ -1.07
HLA-DOA-204ENST00000485901 FHL2Q14192 279 aa8.35□□□□□ -1.07
HLA-DOA-204ENST00000485901 ZNF876PQ49A33 203 aa8.35□□□□□ -1.07
HLA-DOA-204ENST00000485901 OR4C5Q8NGB2 326 aa8.35□□□□□ -1.07
HLA-DOA-204ENST00000485901 PTH2Q96A98 100 aa8.35□□□□□ -1.07
HLA-DOA-204ENST00000485901 C9orf85Q96MD7 179 aa8.35□□□□□ -1.07
HLA-DOA-204ENST00000485901 MLST8Q9BVC4 326 aa8.35□□□□□ -1.07
HLA-DOA-204ENST00000485901 PRO0255Q9UI72 69 aa8.35□□□□□ -1.07
HLA-DOA-204ENST00000485901 HHLA3Q9XRX5 114 aa8.35□□□□□ -1.07
HLA-DOA-204ENST00000485901 HSPG2P98160 4391 aa8.34□□□□□ -1.07
HLA-DOA-204ENST00000485901 TRAV4A0A0B4J268 109 aa8.34□□□□□ -1.07
HLA-DOA-204ENST00000485901 KRBOX1C9JBD0 128 aa8.34□□□□□ -1.07
HLA-DOA-204ENST00000485901 C9JCJ5 164 aa8.34□□□□□ -1.07
HLA-DOA-204ENST00000485901 PAX4O43316 350 aa8.34□□□□□ -1.07
HLA-DOA-204ENST00000485901 CIDEAO60543 219 aa8.34□□□□□ -1.07
HLA-DOA-204ENST00000485901 RNASE3P12724 160 aaKnown RBP8.34□□□□□ -1.07
HLA-DOA-204ENST00000485901 DNLZQ5SXM8 178 aa8.34□□□□□ -1.07
HLA-DOA-204ENST00000485901 C1orf134Q5TEV5 83 aa8.34□□□□□ -1.07
HLA-DOA-204ENST00000485901 NHLRC2Q8NBF2 726 aa8.34□□□□□ -1.07
HLA-DOA-204ENST00000485901 VSIG2Q96IQ7 327 aa8.34□□□□□ -1.07
HLA-DOA-204ENST00000485901 ZNF479Q96JC4 524 aa8.34□□□□□ -1.07
HLA-DOA-204ENST00000485901 MED9Q9NWA0 146 aa8.34□□□□□ -1.07
HLA-DOA-204ENST00000485901 M0R036 132 aa8.33□□□□□ -1.08
HLA-DOA-204ENST00000485901 M0R2N4 97 aa8.33□□□□□ -1.08
HLA-DOA-204ENST00000485901 SFTA3P0C7M3 94 aa8.33□□□□□ -1.08
HLA-DOA-204ENST00000485901 CRYBA4P53673 196 aa8.33□□□□□ -1.08
HLA-DOA-204ENST00000485901 LINC01559Q495D7 138 aa8.33□□□□□ -1.08
HLA-DOA-204ENST00000485901 PIK3CD-AS1Q5SR53 167 aa8.33□□□□□ -1.08
HLA-DOA-204ENST00000485901 LYPD6BQ8NI32 183 aa8.33□□□□□ -1.08
HLA-DOA-204ENST00000485901 IL36BQ9NZH7 164 aa8.33□□□□□ -1.08
HLA-DOA-204ENST00000485901 RBFOX3A6NFN3 312 aa8.32□□□□□ -1.08
HLA-DOA-204ENST00000485901 PGPEP1LA6NFU8 196 aa8.32□□□□□ -1.08
HLA-DOA-204ENST00000485901 SMIM12Q96EX1 92 aa8.32□□□□□ -1.08
HLA-DOA-204ENST00000485901 DERL1Q9BUN8 251 aa8.32□□□□□ -1.08
HLA-DOA-204ENST00000485901 TMSB15BA0A087X1C1 80 aa8.31□□□□□ -1.08
HLA-DOA-204ENST00000485901 A0A096LPF7 62 aa8.31□□□□□ -1.08
HLA-DOA-204ENST00000485901 RAB19A4D1S5 217 aa8.31□□□□□ -1.08
HLA-DOA-204ENST00000485901 GRIFINA4D1Z8 144 aa8.31□□□□□ -1.08
HLA-DOA-204ENST00000485901 RS1O15537 224 aa8.31□□□□□ -1.08
HLA-DOA-204ENST00000485901 ARMS2P0C7Q2 107 aa8.31□□□□□ -1.08
HLA-DOA-204ENST00000485901 GNG4P50150 75 aa8.31□□□□□ -1.08
HLA-DOA-204ENST00000485901 MRPL23Q16540 153 aaKnown RBP8.31□□□□□ -1.08
HLA-DOA-204ENST00000485901 CENPWQ5EE01 88 aa8.31□□□□□ -1.08
HLA-DOA-204ENST00000485901 PRR27Q6MZM9 219 aa8.31□□□□□ -1.08
HLA-DOA-204ENST00000485901 SYT8Q8NBV8 401 aa8.31□□□□□ -1.08
HLA-DOA-204ENST00000485901 ICOSQ9Y6W8 199 aa8.31□□□□□ -1.08
HLA-DOA-204ENST00000485901 ABCA13Q86UQ4 5058 aa8.31□□□□□ -1.08
HLA-DOA-204ENST00000485901 A8MWV9 139 aa8.3□□□□□ -1.08
HLA-DOA-204ENST00000485901 H3BVH4 76 aa8.3□□□□□ -1.08
HLA-DOA-204ENST00000485901 MGST1P10620 155 aaKnown RBP8.3□□□□□ -1.08
HLA-DOA-204ENST00000485901 ESRGQ1W209 222 aa8.3□□□□□ -1.08
HLA-DOA-204ENST00000485901 ZNF506Q5JVG8 444 aa8.3□□□□□ -1.08
HLA-DOA-204ENST00000485901 CFAP126Q5VTH2 177 aa8.3□□□□□ -1.08
HLA-DOA-204ENST00000485901 ZNF575Q86XF7 245 aa8.3□□□□□ -1.08
HLA-DOA-204ENST00000485901 DAZAP1Q96EP5 407 aaKnown RBP8.3□□□□□ -1.08
HLA-DOA-204ENST00000485901 BIN3Q9NQY0 253 aa8.3□□□□□ -1.08
HLA-DOA-204ENST00000485901 LINC00588Q9Y4M8 146 aa8.3□□□□□ -1.08
HLA-DOA-204ENST00000485901 PHLDA3Q9Y5J5 127 aa8.3□□□□□ -1.08
HLA-DOA-204ENST00000485901 CXCL1P09341 107 aa8.29□□□□□ -1.08
HLA-DOA-204ENST00000485901 DMRTA1Q5VZB9 504 aa8.29□□□□□ -1.08
HLA-DOA-204ENST00000485901 PCNPQ8WW12 178 aaKnown RBP8.29□□□□□ -1.08
HLA-DOA-204ENST00000485901 SCRT2Q9NQ03 307 aa8.29□□□□□ -1.08
HLA-DOA-204ENST00000485901 LRP1BQ9NZR2 4599 aa8.29□□□□□ -1.08
HLA-DOA-204ENST00000485901 IGLV2-18A0A075B6J9 118 aa8.28□□□□□ -1.08
HLA-DOA-204ENST00000485901 TMEM250H0YL14 139 aa8.28□□□□□ -1.08
HLA-DOA-204ENST00000485901 IGLV2-8P01709 118 aa8.28□□□□□ -1.08
HLA-DOA-204ENST00000485901 GATA1P15976 413 aaPredicted RBP8.28□□□□□ -1.08
HLA-DOA-204ENST00000485901 TEX261Q6UWH6 196 aa8.28□□□□□ -1.08
HLA-DOA-204ENST00000485901 ZFP2Q6ZN57 461 aa8.28□□□□□ -1.08
HLA-DOA-204ENST00000485901 NEGR1Q7Z3B1 354 aa8.28□□□□□ -1.08
HLA-DOA-204ENST00000485901 ZNRF2Q8NHG8 242 aa8.28□□□□□ -1.08
HLA-DOA-204ENST00000485901 PRADC1Q9BSG0 188 aa8.28□□□□□ -1.08
HLA-DOA-204ENST00000485901 EIF5A2Q9GZV4 153 aaKnown RBP8.28□□□□□ -1.08
HLA-DOA-204ENST00000485901 IGHV3-73A0A0B4J1V6 119 aa8.27□□□□□ -1.09
HLA-DOA-204ENST00000485901 TRBV6-4A0A1B0GX49 114 aa8.27□□□□□ -1.09
HLA-DOA-204ENST00000485901 K7EQD1 137 aa8.27□□□□□ -1.09
HLA-DOA-204ENST00000485901 NDUFS6O75380 124 aaKnown RBP8.27□□□□□ -1.09
HLA-DOA-204ENST00000485901 GYPEP15421 78 aa8.27□□□□□ -1.09
HLA-DOA-204ENST00000485901 BTF3P20290 206 aaKnown RBP8.27□□□□□ -1.09
HLA-DOA-204ENST00000485901 SRIP30626 198 aa8.27□□□□□ -1.09
HLA-DOA-204ENST00000485901 RPS20P60866 119 aaKnown RBP8.27□□□□□ -1.09
HLA-DOA-204ENST00000485901 RPL19P84098 196 aaKnown RBP8.27□□□□□ -1.09
HLA-DOA-204ENST00000485901 SH2D6Q7Z4S9 175 aa8.27□□□□□ -1.09
HLA-DOA-204ENST00000485901 ZFP82Q8N141 532 aa8.27□□□□□ -1.09
HLA-DOA-204ENST00000485901 UPK3BQ9BT76 320 aa8.27□□□□□ -1.09
HLA-DOA-204ENST00000485901 KRTAP4-5Q9BYR2 181 aa8.27□□□□□ -1.09
HLA-DOA-204ENST00000485901 Q9H8V8 135 aa8.27□□□□□ -1.09
HLA-DOA-204ENST00000485901 TRBV20OR9-2A0A075B6H5 130 aa8.26□□□□□ -1.09
HLA-DOA-204ENST00000485901 XKRY2A2RUG3 117 aa8.26□□□□□ -1.09
HLA-DOA-204ENST00000485901 C19orf71A6NCJ1 209 aa8.26□□□□□ -1.09
HLA-DOA-204ENST00000485901 C16orf90A8MZG2 172 aa8.26□□□□□ -1.09
HLA-DOA-204ENST00000485901 M0R381 172 aa8.26□□□□□ -1.09
HLA-DOA-204ENST00000485901 RHOHQ15669 191 aa8.26□□□□□ -1.09
HLA-DOA-204ENST00000485901 TOR2AQ5JU69 321 aa8.26□□□□□ -1.09
HLA-DOA-204ENST00000485901 LYPD5Q6UWN5 251 aa8.26□□□□□ -1.09
HLA-DOA-204ENST00000485901 SLC25A29Q8N8R3 303 aa8.26□□□□□ -1.09
HLA-DOA-204ENST00000485901 FAM210AQ96ND0 272 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms