RNA–Protein interactions for RNA: ENST00000485780.1

SHROOM3-207, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 531 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-207ENST00000485780 LINC01551Q86U37 167 aa6.6□□□□□ -1.35
SHROOM3-207ENST00000485780 OCC1Q8TAD7 63 aa6.6□□□□□ -1.35
SHROOM3-207ENST00000485780 LINC00476Q8WZB0 136 aa6.6□□□□□ -1.35
SHROOM3-207ENST00000485780 RASL10AQ92737 203 aa6.6□□□□□ -1.35
SHROOM3-207ENST00000485780 NDUFAF3Q9BU61 184 aa6.6□□□□□ -1.35
SHROOM3-207ENST00000485780 SCRT2Q9NQ03 307 aa6.6□□□□□ -1.35
SHROOM3-207ENST00000485780 IL36BQ9NZH7 164 aa6.6□□□□□ -1.35
SHROOM3-207ENST00000485780 ZNF727A8MUV8 499 aa6.59□□□□□ -1.35
SHROOM3-207ENST00000485780 M0R2P5 195 aa6.59□□□□□ -1.35
SHROOM3-207ENST00000485780 ORM1P02763 201 aa6.59□□□□□ -1.35
SHROOM3-207ENST00000485780 ASIPP42127 132 aa6.59□□□□□ -1.35
SHROOM3-207ENST00000485780 DAD1P61803 113 aa6.59□□□□□ -1.35
SHROOM3-207ENST00000485780 PRR27Q6MZM9 219 aa6.59□□□□□ -1.35
SHROOM3-207ENST00000485780 Q6ZTI0 123 aa6.59□□□□□ -1.35
SHROOM3-207ENST00000485780 FAM231DQ6ZW35 169 aa6.59□□□□□ -1.35
SHROOM3-207ENST00000485780 VPS13DQ5THJ4 4388 aa6.59□□□□□ -1.36
SHROOM3-207ENST00000485780 TRAV10A0A0B4J240 114 aa6.58□□□□□ -1.36
SHROOM3-207ENST00000485780 M0R036 132 aa6.58□□□□□ -1.36
SHROOM3-207ENST00000485780 SNAI2O43623 268 aa6.58□□□□□ -1.36
SHROOM3-207ENST00000485780 NXPH4O95158 308 aa6.58□□□□□ -1.36
SHROOM3-207ENST00000485780 SNAPINO95295 136 aa6.58□□□□□ -1.36
SHROOM3-207ENST00000485780 MGST1P10620 155 aaKnown RBP6.58□□□□□ -1.36
SHROOM3-207ENST00000485780 RPL19P84098 196 aaKnown RBP6.58□□□□□ -1.36
SHROOM3-207ENST00000485780 OR5I1Q13606 314 aa6.58□□□□□ -1.36
SHROOM3-207ENST00000485780 SSBP4Q9BWG4 385 aaPredicted RBP6.58□□□□□ -1.36
SHROOM3-207ENST00000485780 NAT8Q9UHE5 227 aa6.58□□□□□ -1.36
SHROOM3-207ENST00000485780 EPPK1P58107 5090 aaKnown RBP6.58□□□□□ -1.36
SHROOM3-207ENST00000485780 TRGV1A0A0A0MS02 117 aa6.57□□□□□ -1.36
SHROOM3-207ENST00000485780 P01737 135 aa6.57□□□□□ -1.36
SHROOM3-207ENST00000485780 OR5AL1P0C617 328 aa6.57□□□□□ -1.36
SHROOM3-207ENST00000485780 IGLC6P0CF74 106 aa6.57□□□□□ -1.36
SHROOM3-207ENST00000485780 DEFB130BP0DP73 79 aa6.57□□□□□ -1.36
SHROOM3-207ENST00000485780 DEFB130AP0DP74 79 aa6.57□□□□□ -1.36
SHROOM3-207ENST00000485780 CEBPGP53567 150 aa6.57□□□□□ -1.36
SHROOM3-207ENST00000485780 RPS20P60866 119 aaKnown RBP6.57□□□□□ -1.36
SHROOM3-207ENST00000485780 RPL23P62829 140 aaKnown RBP6.57□□□□□ -1.36
SHROOM3-207ENST00000485780 TMEM241Q24JQ0 296 aa6.57□□□□□ -1.36
SHROOM3-207ENST00000485780 CT83Q5H943 113 aa6.57□□□□□ -1.36
SHROOM3-207ENST00000485780 SOHLH1Q5JUK2 328 aa6.57□□□□□ -1.36
SHROOM3-207ENST00000485780 CLRN3Q8NCR9 226 aa6.57□□□□□ -1.36
SHROOM3-207ENST00000485780 NUDT10Q8NFP7 164 aa6.57□□□□□ -1.36
SHROOM3-207ENST00000485780 ISOC2Q96AB3 205 aa6.57□□□□□ -1.36
SHROOM3-207ENST00000485780 NUDT11Q96G61 164 aa6.57□□□□□ -1.36
SHROOM3-207ENST00000485780 MRPL16Q9NX20 251 aaKnown RBP6.57□□□□□ -1.36
SHROOM3-207ENST00000485780 DNAH6Q9C0G6 4158 aa6.56□□□□□ -1.36
SHROOM3-207ENST00000485780 DEFB131BA0A096LNP1 70 aa6.56□□□□□ -1.36
SHROOM3-207ENST00000485780 GAGE12BA1L429 117 aa6.56□□□□□ -1.36
SHROOM3-207ENST00000485780 H3BVH4 76 aa6.56□□□□□ -1.36
SHROOM3-207ENST00000485780 GAGE7O76087 117 aa6.56□□□□□ -1.36
SHROOM3-207ENST00000485780 ATP5G1P05496 136 aa6.56□□□□□ -1.36
SHROOM3-207ENST00000485780 ARMS2P0C7Q2 107 aa6.56□□□□□ -1.36
SHROOM3-207ENST00000485780 GAGE12FP0CL80 117 aa6.56□□□□□ -1.36
SHROOM3-207ENST00000485780 GAGE12GP0CL81 117 aa6.56□□□□□ -1.36
SHROOM3-207ENST00000485780 GAGE12IP0CL82 117 aa6.56□□□□□ -1.36
SHROOM3-207ENST00000485780 POM121L12Q8N7R1 296 aa6.56□□□□□ -1.36
SHROOM3-207ENST00000485780 OR2D3Q8NGH3 330 aa6.56□□□□□ -1.36
SHROOM3-207ENST00000485780 DAZAP1Q96EP5 407 aaKnown RBP6.56□□□□□ -1.36
SHROOM3-207ENST00000485780 FAM210BQ96KR6 192 aa6.56□□□□□ -1.36
SHROOM3-207ENST00000485780 RNASE7Q9H1E1 156 aaKnown RBP6.56□□□□□ -1.36
SHROOM3-207ENST00000485780 RPP21Q9H633 154 aaKnown RBP6.56□□□□□ -1.36
SHROOM3-207ENST00000485780 OSTCQ9NRP0 149 aa6.56□□□□□ -1.36
SHROOM3-207ENST00000485780 KMT2AQ03164 3969 aa6.56□□□□□ -1.36
SHROOM3-207ENST00000485780 DNAH10Q8IVF4 4471 aa6.55□□□□□ -1.36
SHROOM3-207ENST00000485780 TMSB15BA0A087X1C1 80 aa6.55□□□□□ -1.36
SHROOM3-207ENST00000485780 TRAV4A0A0B4J268 109 aa6.55□□□□□ -1.36
SHROOM3-207ENST00000485780 XKRY2A2RUG3 117 aa6.55□□□□□ -1.36
SHROOM3-207ENST00000485780 GRIFINA4D1Z8 144 aa6.55□□□□□ -1.36
SHROOM3-207ENST00000485780 S100A4P26447 101 aaKnown RBP6.55□□□□□ -1.36
SHROOM3-207ENST00000485780 CTRLP40313 264 aa6.55□□□□□ -1.36
SHROOM3-207ENST00000485780 CNFNQ9BYD5 112 aa6.55□□□□□ -1.36
SHROOM3-207ENST00000485780 BIRC6Q9NR09 4857 aa6.54□□□□□ -1.36
SHROOM3-207ENST00000485780 TRGV2A0A075B6R0 118 aa6.54□□□□□ -1.36
SHROOM3-207ENST00000485780 IGHV4-4A0A075B6R2 117 aa6.54□□□□□ -1.36
SHROOM3-207ENST00000485780 LOC105371267A0A1B0GV96 52 aa6.54□□□□□ -1.36
SHROOM3-207ENST00000485780 A0A1W2PPQ1 181 aa6.54□□□□□ -1.36
SHROOM3-207ENST00000485780 IGLL5B9A064 214 aa6.54□□□□□ -1.36
SHROOM3-207ENST00000485780 H3BNG1 76 aa6.54□□□□□ -1.36
SHROOM3-207ENST00000485780 RS1O15537 224 aa6.54□□□□□ -1.36
SHROOM3-207ENST00000485780 CIDEAO60543 219 aa6.54□□□□□ -1.36
SHROOM3-207ENST00000485780 HOXA5P20719 270 aa6.54□□□□□ -1.36
SHROOM3-207ENST00000485780 TCTAP57738 103 aa6.54□□□□□ -1.36
SHROOM3-207ENST00000485780 PNRC1Q12796 327 aaPredicted RBP6.54□□□□□ -1.36
SHROOM3-207ENST00000485780 ZNF876PQ49A33 203 aa6.54□□□□□ -1.36
SHROOM3-207ENST00000485780 UFSP1Q6NVU6 142 aa6.54□□□□□ -1.36
SHROOM3-207ENST00000485780 FER1L6-AS1Q8NA97 138 aa6.54□□□□□ -1.36
SHROOM3-207ENST00000485780 OR10AG1Q8NH19 301 aa6.54□□□□□ -1.36
SHROOM3-207ENST00000485780 V9GYV3 84 aa6.54□□□□□ -1.36
SHROOM3-207ENST00000485780 C7orf77A4D0Y5 90 aa6.53□□□□□ -1.36
SHROOM3-207ENST00000485780 FAM231BA6NCW3 169 aa6.53□□□□□ -1.36
SHROOM3-207ENST00000485780 COLCA2A8K830 154 aa6.53□□□□□ -1.36
SHROOM3-207ENST00000485780 A8MWL6 223 aa6.53□□□□□ -1.36
SHROOM3-207ENST00000485780 A8MWV9 139 aa6.53□□□□□ -1.36
SHROOM3-207ENST00000485780 F2Z2F3 143 aa6.53□□□□□ -1.36
SHROOM3-207ENST00000485780 GATCO43716 136 aaKnown RBP6.53□□□□□ -1.36
SHROOM3-207ENST00000485780 FOXA3P55318 350 aaPredicted RBP6.53□□□□□ -1.36
SHROOM3-207ENST00000485780 ERVFC1-1P60608 527 aa6.53□□□□□ -1.36
SHROOM3-207ENST00000485780 FHL2Q14192 279 aa6.53□□□□□ -1.36
SHROOM3-207ENST00000485780 ADIRFQ15847 76 aa6.53□□□□□ -1.36
SHROOM3-207ENST00000485780 CFAP126Q5VTH2 177 aa6.53□□□□□ -1.36
SHROOM3-207ENST00000485780 LGALS9CQ6DKI2 356 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms