RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 RS1O15537 224 aa8.66□□□□□ -1.02
PTCD1-205ENST00000485746 CIDEAO60543 219 aa8.66□□□□□ -1.02
PTCD1-205ENST00000485746 RNASE3P12724 160 aaKnown RBP8.66□□□□□ -1.02
PTCD1-205ENST00000485746 ZNF674Q2M3X9 581 aa8.66□□□□□ -1.02
PTCD1-205ENST00000485746 ZNF506Q5JVG8 444 aa8.66□□□□□ -1.02
PTCD1-205ENST00000485746 Q6ZR54 194 aa8.66□□□□□ -1.02
PTCD1-205ENST00000485746 C9orf62Q8N4C0 152 aa8.66□□□□□ -1.02
PTCD1-205ENST00000485746 TXNDC17Q9BRA2 123 aa8.66□□□□□ -1.02
PTCD1-205ENST00000485746 PRADC1Q9BSG0 188 aa8.66□□□□□ -1.02
PTCD1-205ENST00000485746 K7EQD1 137 aa8.65□□□□□ -1.02
PTCD1-205ENST00000485746 ARMS2P0C7Q2 107 aa8.65□□□□□ -1.02
PTCD1-205ENST00000485746 TTC32Q5I0X7 151 aa8.65□□□□□ -1.02
PTCD1-205ENST00000485746 CFAP126Q5VTH2 177 aa8.65□□□□□ -1.02
PTCD1-205ENST00000485746 PRR27Q6MZM9 219 aa8.65□□□□□ -1.02
PTCD1-205ENST00000485746 COX8CQ7Z4L0 72 aa8.65□□□□□ -1.02
PTCD1-205ENST00000485746 PTH2Q96A98 100 aa8.65□□□□□ -1.02
PTCD1-205ENST00000485746 PHLDA3Q9Y5J5 127 aa8.65□□□□□ -1.02
PTCD1-205ENST00000485746 A0A1B0GVG6 124 aa8.64□□□□□ -1.03
PTCD1-205ENST00000485746 A8MWV9 139 aa8.64□□□□□ -1.03
PTCD1-205ENST00000485746 NXPH4O95158 308 aa8.64□□□□□ -1.03
PTCD1-205ENST00000485746 GATA1P15976 413 aaPredicted RBP8.64□□□□□ -1.03
PTCD1-205ENST00000485746 RPL35P42766 123 aaKnown RBP8.64□□□□□ -1.03
PTCD1-205ENST00000485746 LYPD5Q6UWN5 251 aa8.64□□□□□ -1.03
PTCD1-205ENST00000485746 UPK3BQ9BT76 320 aa8.64□□□□□ -1.03
PTCD1-205ENST00000485746 IL36BQ9NZH7 164 aa8.64□□□□□ -1.03
PTCD1-205ENST00000485746 KMT2AQ03164 3969 aa8.63□□□□□ -1.03
PTCD1-205ENST00000485746 LOC100131303A0A0U1RQF7 123 aa8.63□□□□□ -1.03
PTCD1-205ENST00000485746 RTL8CO15255 209 aa8.63□□□□□ -1.03
PTCD1-205ENST00000485746 SIVA1O15304 175 aa8.63□□□□□ -1.03
PTCD1-205ENST00000485746 PDE6DO43924 150 aa8.63□□□□□ -1.03
PTCD1-205ENST00000485746 MGST1P10620 155 aaKnown RBP8.63□□□□□ -1.03
PTCD1-205ENST00000485746 BLOC1S1P78537 153 aa8.63□□□□□ -1.03
PTCD1-205ENST00000485746 RHOHQ15669 191 aa8.63□□□□□ -1.03
PTCD1-205ENST00000485746 LINC01559Q495D7 138 aa8.63□□□□□ -1.03
PTCD1-205ENST00000485746 ALKAL2Q6UX46 152 aa8.63□□□□□ -1.03
PTCD1-205ENST00000485746 SH2D6Q7Z4S9 175 aa8.63□□□□□ -1.03
PTCD1-205ENST00000485746 C6orf223Q8N319 242 aa8.63□□□□□ -1.03
PTCD1-205ENST00000485746 DAZAP1Q96EP5 407 aaKnown RBP8.63□□□□□ -1.03
PTCD1-205ENST00000485746 MED9Q9NWA0 146 aa8.63□□□□□ -1.03
PTCD1-205ENST00000485746 M0R381 172 aa8.62□□□□□ -1.03
PTCD1-205ENST00000485746 TAGLN2P37802 199 aaKnown RBP8.62□□□□□ -1.03
PTCD1-205ENST00000485746 NKX2-5P52952 324 aaPredicted RBP8.62□□□□□ -1.03
PTCD1-205ENST00000485746 MEF2BQ02080 365 aaPredicted RBP8.62□□□□□ -1.03
PTCD1-205ENST00000485746 DNLZQ5SXM8 178 aa8.62□□□□□ -1.03
PTCD1-205ENST00000485746 SLC25A29Q8N8R3 303 aa8.62□□□□□ -1.03
PTCD1-205ENST00000485746 VAX2Q9UIW0 290 aa8.62□□□□□ -1.03
PTCD1-205ENST00000485746 BOLA1Q9Y3E2 137 aa8.62□□□□□ -1.03
PTCD1-205ENST00000485746 TRBV6-4A0A1B0GX49 114 aa8.61□□□□□ -1.03
PTCD1-205ENST00000485746 BCL2P10415 239 aa8.61□□□□□ -1.03
PTCD1-205ENST00000485746 GNG4P50150 75 aa8.61□□□□□ -1.03
PTCD1-205ENST00000485746 RPL19P84098 196 aaKnown RBP8.61□□□□□ -1.03
PTCD1-205ENST00000485746 CENPWQ5EE01 88 aa8.61□□□□□ -1.03
PTCD1-205ENST00000485746 PIK3CD-AS1Q5SR53 167 aa8.61□□□□□ -1.03
PTCD1-205ENST00000485746 DMRTA1Q5VZB9 504 aa8.61□□□□□ -1.03
PTCD1-205ENST00000485746 ZFP82Q8N141 532 aa8.61□□□□□ -1.03
PTCD1-205ENST00000485746 C11orf52Q96A22 123 aa8.61□□□□□ -1.03
PTCD1-205ENST00000485746 DERL1Q9BUN8 251 aa8.61□□□□□ -1.03
PTCD1-205ENST00000485746 PARLQ9H300 379 aa8.61□□□□□ -1.03
PTCD1-205ENST00000485746 DNAH6Q9C0G6 4158 aa8.61□□□□□ -1.03
PTCD1-205ENST00000485746 TRAV9-2A0A087WT02 112 aa8.6□□□□□ -1.03
PTCD1-205ENST00000485746 A0A1W2PPQ1 181 aa8.6□□□□□ -1.03
PTCD1-205ENST00000485746 RAB19A4D1S5 217 aa8.6□□□□□ -1.03
PTCD1-205ENST00000485746 FAM74A4Q5TZK3 123 aa8.6□□□□□ -1.03
PTCD1-205ENST00000485746 ZFP2Q6ZN57 461 aa8.6□□□□□ -1.03
PTCD1-205ENST00000485746 MLST8Q9BVC4 326 aa8.6□□□□□ -1.03
PTCD1-205ENST00000485746 JPT2Q9H910 190 aa8.6□□□□□ -1.03
PTCD1-205ENST00000485746 RHODO00212 210 aa8.59□□□□□ -1.03
PTCD1-205ENST00000485746 SSTP61278 116 aa8.59□□□□□ -1.03
PTCD1-205ENST00000485746 BIN3Q9NQY0 253 aa8.59□□□□□ -1.03
PTCD1-205ENST00000485746 LY96Q9Y6Y9 160 aa8.59□□□□□ -1.03
PTCD1-205ENST00000485746 A0A087WWL8 130 aa8.58□□□□□ -1.04
PTCD1-205ENST00000485746 TRAV8-6A0A0B4J262 113 aa8.58□□□□□ -1.04
PTCD1-205ENST00000485746 GAGE12JA6NER3 117 aa8.58□□□□□ -1.04
PTCD1-205ENST00000485746 EVI2AP22794 236 aa8.58□□□□□ -1.04
PTCD1-205ENST00000485746 GAGE1Q13065 139 aa8.58□□□□□ -1.04
PTCD1-205ENST00000485746 GAGE4Q13068 117 aa8.58□□□□□ -1.04
PTCD1-205ENST00000485746 GAGE5Q13069 117 aa8.58□□□□□ -1.04
PTCD1-205ENST00000485746 GAGE13Q4V321 117 aa8.58□□□□□ -1.04
PTCD1-205ENST00000485746 SPANXN1Q5VSR9 72 aa8.58□□□□□ -1.04
PTCD1-205ENST00000485746 ATP6V0E2Q8NHE4 81 aa8.58□□□□□ -1.04
PTCD1-205ENST00000485746 SFRP2Q96HF1 295 aa8.58□□□□□ -1.04
PTCD1-205ENST00000485746 SAMD10Q9BYL1 202 aa8.58□□□□□ -1.04
PTCD1-205ENST00000485746 SCRT2Q9NQ03 307 aa8.58□□□□□ -1.04
PTCD1-205ENST00000485746 MUC4Q99102 2169 aa8.58□□□□□ -1.04
PTCD1-205ENST00000485746 XKRY2A2RUG3 117 aa8.57□□□□□ -1.04
PTCD1-205ENST00000485746 RBFOX3A6NFN3 312 aa8.57□□□□□ -1.04
PTCD1-205ENST00000485746 CXCL1P09341 107 aa8.57□□□□□ -1.04
PTCD1-205ENST00000485746 MED14OSP0DP75 135 aa8.57□□□□□ -1.04
PTCD1-205ENST00000485746 CEBPGP53567 150 aa8.57□□□□□ -1.04
PTCD1-205ENST00000485746 RPS20P60866 119 aaKnown RBP8.57□□□□□ -1.04
PTCD1-205ENST00000485746 OR10J3Q5JRS4 329 aa8.57□□□□□ -1.04
PTCD1-205ENST00000485746 Q6ZSN1 163 aa8.57□□□□□ -1.04
PTCD1-205ENST00000485746 OR2D3Q8NGH3 330 aa8.57□□□□□ -1.04
PTCD1-205ENST00000485746 TPPP3Q9BW30 176 aa8.57□□□□□ -1.04
PTCD1-205ENST00000485746 DNAH10Q8IVF4 4471 aa8.56□□□□□ -1.04
PTCD1-205ENST00000485746 MUC21A0A0G2JKD1 596 aa8.56□□□□□ -1.04
PTCD1-205ENST00000485746 MUC21A0A140T8X8 626 aa8.56□□□□□ -1.04
PTCD1-205ENST00000485746 P01737 135 aa8.56□□□□□ -1.04
PTCD1-205ENST00000485746 WFDC10BQ8IUB3 73 aa8.56□□□□□ -1.04
PTCD1-205ENST00000485746 SMIM12Q96EX1 92 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms