RNA–Protein interactions for RNA: ENST00000485592.5

SMARCD3-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 820 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-211ENST00000485592 TDRG1Q3Y452 100 aa9.18□□□□□ -0.94
SMARCD3-211ENST00000485592 AKR1C8PQ5T2L2 129 aa9.18□□□□□ -0.94
SMARCD3-211ENST00000485592 C9orf62Q8N4C0 152 aa9.18□□□□□ -0.94
SMARCD3-211ENST00000485592 TMED6Q8WW62 240 aa9.18□□□□□ -0.94
SMARCD3-211ENST00000485592 FAM30AQ9NZY2 134 aa9.18□□□□□ -0.94
SMARCD3-211ENST00000485592 SRRM2Q9UQ35 2752 aaKnown RBP9.18□□□□□ -0.94
SMARCD3-211ENST00000485592 TRAV21A0A0B4J279 112 aa9.17□□□□□ -0.94
SMARCD3-211ENST00000485592 IGHV3-16A0A0C4DH30 117 aa9.17□□□□□ -0.94
SMARCD3-211ENST00000485592 PGPA6NDG6 321 aa9.17□□□□□ -0.94
SMARCD3-211ENST00000485592 FBLL1A6NHQ2 334 aaKnown RBP9.17□□□□□ -0.94
SMARCD3-211ENST00000485592 FGF8P55075 233 aaPredicted RBP9.17□□□□□ -0.94
SMARCD3-211ENST00000485592 HYLS1Q96M11 299 aa9.17□□□□□ -0.94
SMARCD3-211ENST00000485592 PRADC1Q9BSG0 188 aa9.17□□□□□ -0.94
SMARCD3-211ENST00000485592 TM2D2Q9BX73 214 aa9.17□□□□□ -0.94
SMARCD3-211ENST00000485592 MAP1LC3B2A6NCE7 125 aa9.16□□□□□ -0.94
SMARCD3-211ENST00000485592 KRTAP29-1A8MX34 341 aaPredicted RBP9.16□□□□□ -0.94
SMARCD3-211ENST00000485592 GNRH2O43555 120 aa9.16□□□□□ -0.94
SMARCD3-211ENST00000485592 PFDN1O60925 122 aa9.16□□□□□ -0.94
SMARCD3-211ENST00000485592 IGHV3-30P01768 117 aa9.16□□□□□ -0.94
SMARCD3-211ENST00000485592 IGHV3-33P01772 117 aa9.16□□□□□ -0.94
SMARCD3-211ENST00000485592 IGHV3-30-3P0DP02 117 aa9.16□□□□□ -0.94
SMARCD3-211ENST00000485592 IGHV3-30-5P0DP03 117 aa9.16□□□□□ -0.94
SMARCD3-211ENST00000485592 TPT1P13693 172 aaKnown RBP9.16□□□□□ -0.94
SMARCD3-211ENST00000485592 RHOHQ15669 191 aa9.16□□□□□ -0.94
SMARCD3-211ENST00000485592 FAM74A1Q5RGS3 127 aa9.16□□□□□ -0.94
SMARCD3-211ENST00000485592 CMTM2Q8TAZ6 248 aa9.16□□□□□ -0.94
SMARCD3-211ENST00000485592 MAP1LC3BQ9GZQ8 125 aa9.16□□□□□ -0.94
SMARCD3-211ENST00000485592 SDF2L1Q9HCN8 221 aa9.16□□□□□ -0.94
SMARCD3-211ENST00000485592 RPH3ALQ9UNE2 315 aa9.16□□□□□ -0.94
SMARCD3-211ENST00000485592 TRAV8-1A0A0A6YYK1 113 aa9.15□□□□□ -0.94
SMARCD3-211ENST00000485592 CIDEAO60543 219 aa9.15□□□□□ -0.94
SMARCD3-211ENST00000485592 IGLV2-11P01706 119 aa9.15□□□□□ -0.94
SMARCD3-211ENST00000485592 TYMSP04818 313 aa9.15□□□□□ -0.94
SMARCD3-211ENST00000485592 LAGE3Q14657 143 aa9.15□□□□□ -0.94
SMARCD3-211ENST00000485592 LELP1Q5T871 98 aa9.15□□□□□ -0.94
SMARCD3-211ENST00000485592 LINC00528Q8N1L1 170 aa9.15□□□□□ -0.94
SMARCD3-211ENST00000485592 ARL6IP6Q8N6S5 226 aa9.15□□□□□ -0.94
SMARCD3-211ENST00000485592 C5orf17Q8NAS9 161 aa9.15□□□□□ -0.94
SMARCD3-211ENST00000485592 DEFB104AQ8WTQ1 72 aa9.15□□□□□ -0.94
SMARCD3-211ENST00000485592 KCNS1Q96KK3 526 aa9.15□□□□□ -0.94
SMARCD3-211ENST00000485592 TMEM167BQ9NRX6 74 aa9.15□□□□□ -0.94
SMARCD3-211ENST00000485592 UMAD1C9J7I0 102 aa9.14□□□□□ -0.95
SMARCD3-211ENST00000485592 TCRAP04437 139 aa9.14□□□□□ -0.95
SMARCD3-211ENST00000485592 GOLT1AQ6ZVE7 132 aa9.14□□□□□ -0.95
SMARCD3-211ENST00000485592 SLC25A29Q8N8R3 303 aa9.14□□□□□ -0.95
SMARCD3-211ENST00000485592 TVP23CQ96ET8 276 aa9.14□□□□□ -0.95
SMARCD3-211ENST00000485592 TRBV6-4A0A1B0GX49 114 aa9.13□□□□□ -0.95
SMARCD3-211ENST00000485592 A0A1W2PRE2 83 aa9.13□□□□□ -0.95
SMARCD3-211ENST00000485592 FAM74A7A6NL05 159 aa9.13□□□□□ -0.95
SMARCD3-211ENST00000485592 F6UZH7 168 aa9.13□□□□□ -0.95
SMARCD3-211ENST00000485592 UBE2G2P60604 165 aa9.13□□□□□ -0.95
SMARCD3-211ENST00000485592 Q6ZSA8 131 aa9.13□□□□□ -0.95
SMARCD3-211ENST00000485592 FAM213BQ8TBF2 198 aa9.13□□□□□ -0.95
SMARCD3-211ENST00000485592 MBD3L1Q8WWY6 194 aa9.13□□□□□ -0.95
SMARCD3-211ENST00000485592 TREM1Q9NP99 234 aa9.13□□□□□ -0.95
SMARCD3-211ENST00000485592 NKX2-5P52952 324 aaPredicted RBP9.12□□□□□ -0.95
SMARCD3-211ENST00000485592 SUMO1P63165 101 aaKnown RBP9.12□□□□□ -0.95
SMARCD3-211ENST00000485592 EIF5AP63241 154 aaKnown RBP9.12□□□□□ -0.95
SMARCD3-211ENST00000485592 ZNF876PQ49A33 203 aa9.12□□□□□ -0.95
SMARCD3-211ENST00000485592 ZFP69Q49AA0 526 aa9.12□□□□□ -0.95
SMARCD3-211ENST00000485592 DPPA3Q6W0C5 159 aa9.12□□□□□ -0.95
SMARCD3-211ENST00000485592 SYT8Q8NBV8 401 aa9.12□□□□□ -0.95
SMARCD3-211ENST00000485592 ATP6V0E2Q8NHE4 81 aa9.12□□□□□ -0.95
SMARCD3-211ENST00000485592 GTSF1LQ9H1H1 148 aa9.12□□□□□ -0.95
SMARCD3-211ENST00000485592 TRAV8-3A0A0A6YYJ7 113 aa9.11□□□□□ -0.95
SMARCD3-211ENST00000485592 RS1O15537 224 aa9.11□□□□□ -0.95
SMARCD3-211ENST00000485592 SERTAD4-AS1Q5TG53 156 aa9.11□□□□□ -0.95
SMARCD3-211ENST00000485592 CFAP126Q5VTH2 177 aa9.11□□□□□ -0.95
SMARCD3-211ENST00000485592 SLC51BQ86UW2 128 aa9.11□□□□□ -0.95
SMARCD3-211ENST00000485592 SGK494Q96LW2 274 aa9.11□□□□□ -0.95
SMARCD3-211ENST00000485592 NDFIP1Q9BT67 221 aa9.11□□□□□ -0.95
SMARCD3-211ENST00000485592 EPDR1Q9UM22 224 aa9.11□□□□□ -0.95
SMARCD3-211ENST00000485592 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.1□□□□□ -0.95
SMARCD3-211ENST00000485592 IGHV3-73A0A0B4J1V6 119 aa9.1□□□□□ -0.95
SMARCD3-211ENST00000485592 A0A1B0GV50 99 aa9.1□□□□□ -0.95
SMARCD3-211ENST00000485592 SERTM2A0A1B0GWG4 89 aa9.1□□□□□ -0.95
SMARCD3-211ENST00000485592 MGST1P10620 155 aaKnown RBP9.1□□□□□ -0.95
SMARCD3-211ENST00000485592 WFDC2Q14508 124 aa9.1□□□□□ -0.95
SMARCD3-211ENST00000485592 TOR2AQ5JU69 321 aa9.1□□□□□ -0.95
SMARCD3-211ENST00000485592 CYB561D1Q8N8Q1 229 aa9.1□□□□□ -0.95
SMARCD3-211ENST00000485592 SFT2D1Q8WV19 159 aa9.1□□□□□ -0.95
SMARCD3-211ENST00000485592 LINC00479Q96M42 142 aa9.1□□□□□ -0.95
SMARCD3-211ENST00000485592 ARL2-SNX15V9GYD0 113 aa9.1□□□□□ -0.95
SMARCD3-211ENST00000485592 LECT2O14960 151 aa9.09□□□□□ -0.95
SMARCD3-211ENST00000485592 SULT1A2P50226 295 aa9.09□□□□□ -0.95
SMARCD3-211ENST00000485592 TMEM75Q8N9X5 138 aa9.09□□□□□ -0.95
SMARCD3-211ENST00000485592 COX11Q9Y6N1 276 aa9.09□□□□□ -0.95
SMARCD3-211ENST00000485592 DNAH8Q96JB1 4490 aa9.09□□□□□ -0.95
SMARCD3-211ENST00000485592 TRAV1-1A0A0B4J248 108 aa9.08□□□□□ -0.96
SMARCD3-211ENST00000485592 PEX7O00628 323 aa9.08□□□□□ -0.96
SMARCD3-211ENST00000485592 H2AFB1P0C5Y9 115 aa9.08□□□□□ -0.96
SMARCD3-211ENST00000485592 CCL20P78556 96 aa9.08□□□□□ -0.96
SMARCD3-211ENST00000485592 FLI1Q01543 452 aaPredicted RBP9.08□□□□□ -0.96
SMARCD3-211ENST00000485592 TRAV34A0A0B4J273 112 aa9.07□□□□□ -0.96
SMARCD3-211ENST00000485592 PAGE4O60829 102 aa9.07□□□□□ -0.96
SMARCD3-211ENST00000485592 RAB5CP51148 216 aa9.07□□□□□ -0.96
SMARCD3-211ENST00000485592 ZNF80P51504 273 aaPredicted RBP9.07□□□□□ -0.96
SMARCD3-211ENST00000485592 ZNF506Q5JVG8 444 aa9.07□□□□□ -0.96
SMARCD3-211ENST00000485592 SCXQ7RTU7 201 aa9.07□□□□□ -0.96
SMARCD3-211ENST00000485592 Q86TA4 180 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms