RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 C9orf85Q96MD7 179 aa8.35□□□□□ -1.07
APTX-227ENST00000485479 JPT2Q9H910 190 aa8.35□□□□□ -1.07
APTX-227ENST00000485479 SACSQ9NZJ4 4579 aa8.35□□□□□ -1.07
APTX-227ENST00000485479 ZNF727A8MUV8 499 aa8.35□□□□□ -1.07
APTX-227ENST00000485479 M0R2P5 195 aa8.35□□□□□ -1.07
APTX-227ENST00000485479 TPPP3Q9BW30 176 aa8.35□□□□□ -1.07
APTX-227ENST00000485479 KLK5Q9Y337 293 aaPredicted RBP8.35□□□□□ -1.07
APTX-227ENST00000485479 TRAV26-1A0A087WT03 109 aa8.34□□□□□ -1.07
APTX-227ENST00000485479 C19orf71A6NCJ1 209 aa8.34□□□□□ -1.07
APTX-227ENST00000485479 M0R381 172 aa8.34□□□□□ -1.07
APTX-227ENST00000485479 OR2D3Q8NGH3 330 aa8.34□□□□□ -1.07
APTX-227ENST00000485479 KMT2AQ03164 3969 aa8.34□□□□□ -1.07
APTX-227ENST00000485479 CLLU1Q5K131 121 aa8.33□□□□□ -1.08
APTX-227ENST00000485479 NUDT10Q8NFP7 164 aa8.33□□□□□ -1.08
APTX-227ENST00000485479 OR10AG1Q8NH19 301 aa8.33□□□□□ -1.08
APTX-227ENST00000485479 RASL10AQ92737 203 aa8.33□□□□□ -1.08
APTX-227ENST00000485479 DAZAP1Q96EP5 407 aaKnown RBP8.33□□□□□ -1.08
APTX-227ENST00000485479 NUDT11Q96G61 164 aa8.33□□□□□ -1.08
APTX-227ENST00000485479 SPXQ9BT56 116 aa8.33□□□□□ -1.08
APTX-227ENST00000485479 P01737 135 aa8.33□□□□□ -1.08
APTX-227ENST00000485479 PEA15Q15121 130 aa8.33□□□□□ -1.08
APTX-227ENST00000485479 LGALS9BQ3B8N2 356 aa8.33□□□□□ -1.08
APTX-227ENST00000485479 LINC01551Q86U37 167 aa8.33□□□□□ -1.08
APTX-227ENST00000485479 APLNQ9ULZ1 77 aa8.33□□□□□ -1.08
APTX-227ENST00000485479 NUDT3O95989 172 aa8.32□□□□□ -1.08
APTX-227ENST00000485479 SAMD10Q9BYL1 202 aa8.32□□□□□ -1.08
APTX-227ENST00000485479 IL36BQ9NZH7 164 aa8.32□□□□□ -1.08
APTX-227ENST00000485479 LY6G6CO95867 125 aa8.31□□□□□ -1.08
APTX-227ENST00000485479 OR4C5Q8NGB2 326 aa8.31□□□□□ -1.08
APTX-227ENST00000485479 NDUFAF3Q9BU61 184 aa8.31□□□□□ -1.08
APTX-227ENST00000485479 PHLDA3Q9Y5J5 127 aa8.31□□□□□ -1.08
APTX-227ENST00000485479 RYR2Q92736 4967 aa8.31□□□□□ -1.08
APTX-227ENST00000485479 A0A096LPF7 62 aa8.31□□□□□ -1.08
APTX-227ENST00000485479 FAM74A4Q5TZK3 123 aa8.31□□□□□ -1.08
APTX-227ENST00000485479 CFAP126Q5VTH2 177 aa8.31□□□□□ -1.08
APTX-227ENST00000485479 SMIM12Q96EX1 92 aa8.31□□□□□ -1.08
APTX-227ENST00000485479 VSIG2Q96IQ7 327 aa8.31□□□□□ -1.08
APTX-227ENST00000485479 A0A087WWL8 130 aa8.3□□□□□ -1.08
APTX-227ENST00000485479 TRGV4A0A0C4DH28 118 aa8.3□□□□□ -1.08
APTX-227ENST00000485479 LOC100131303A0A0U1RQF7 123 aa8.3□□□□□ -1.08
APTX-227ENST00000485479 ERVFC1-1P60608 527 aa8.3□□□□□ -1.08
APTX-227ENST00000485479 FHL2Q14192 279 aa8.3□□□□□ -1.08
APTX-227ENST00000485479 ADIRFQ15847 76 aa8.3□□□□□ -1.08
APTX-227ENST00000485479 RPL23P62829 140 aaKnown RBP8.3□□□□□ -1.08
APTX-227ENST00000485479 SOHLH1Q5JUK2 328 aa8.3□□□□□ -1.08
APTX-227ENST00000485479 RPP21Q9H633 154 aaKnown RBP8.3□□□□□ -1.08
APTX-227ENST00000485479 SCRT2Q9NQ03 307 aa8.3□□□□□ -1.08
APTX-227ENST00000485479 TRAV4A0A0B4J268 109 aa8.29□□□□□ -1.08
APTX-227ENST00000485479 Q6ZSN1 163 aa8.29□□□□□ -1.08
APTX-227ENST00000485479 LINC00476Q8WZB0 136 aa8.29□□□□□ -1.08
APTX-227ENST00000485479 C18orf15Q96N68 181 aa8.29□□□□□ -1.08
APTX-227ENST00000485479 MSRB1Q9NZV6 116 aa8.29□□□□□ -1.08
APTX-227ENST00000485479 TMEM241Q24JQ0 296 aa8.28□□□□□ -1.08
APTX-227ENST00000485479 DNLZQ5SXM8 178 aa8.28□□□□□ -1.08
APTX-227ENST00000485479 FER1L6-AS1Q8NA97 138 aa8.28□□□□□ -1.08
APTX-227ENST00000485479 Q9UF83 564 aa8.28□□□□□ -1.08
APTX-227ENST00000485479 HHLA3Q9XRX5 114 aa8.28□□□□□ -1.08
APTX-227ENST00000485479 DNAH1Q9P2D7 4330 aa8.28□□□□□ -1.08
APTX-227ENST00000485479 RS1O15537 224 aa8.28□□□□□ -1.08
APTX-227ENST00000485479 SPANXN1Q5VSR9 72 aa8.28□□□□□ -1.08
APTX-227ENST00000485479 COMMD7Q86VX2 200 aa8.28□□□□□ -1.08
APTX-227ENST00000485479 GTSF1Q8WW33 167 aa8.28□□□□□ -1.08
APTX-227ENST00000485479 ISOC2Q96AB3 205 aa8.28□□□□□ -1.08
APTX-227ENST00000485479 LCE6AA0A183 80 aa8.27□□□□□ -1.09
APTX-227ENST00000485479 PAX4O43316 350 aa8.27□□□□□ -1.09
APTX-227ENST00000485479 SNAI2O43623 268 aa8.27□□□□□ -1.09
APTX-227ENST00000485479 GATCO43716 136 aaKnown RBP8.27□□□□□ -1.09
APTX-227ENST00000485479 IGLC6P0CF74 106 aa8.27□□□□□ -1.09
APTX-227ENST00000485479 ADCYAP1P18509 176 aa8.27□□□□□ -1.09
APTX-227ENST00000485479 CRYBA4P53673 196 aa8.27□□□□□ -1.09
APTX-227ENST00000485479 LYZL1Q6UWQ5 148 aa8.27□□□□□ -1.09
APTX-227ENST00000485479 BIN3Q9NQY0 253 aa8.27□□□□□ -1.09
APTX-227ENST00000485479 NAT8Q9UHE5 227 aa8.27□□□□□ -1.09
APTX-227ENST00000485479 ALMS1Q8TCU4 4167 aa8.26□□□□□ -1.09
APTX-227ENST00000485479 OR5AL1P0C617 328 aa8.26□□□□□ -1.09
APTX-227ENST00000485479 ZFP82Q8N141 532 aa8.26□□□□□ -1.09
APTX-227ENST00000485479 SYT8Q8NBV8 401 aa8.26□□□□□ -1.09
APTX-227ENST00000485479 SSBP4Q9BWG4 385 aaPredicted RBP8.26□□□□□ -1.09
APTX-227ENST00000485479 PRO0255Q9UI72 69 aa8.26□□□□□ -1.09
APTX-227ENST00000485479 LY96Q9Y6Y9 160 aa8.26□□□□□ -1.09
APTX-227ENST00000485479 P0DMU3 169 aa8.26□□□□□ -1.09
APTX-227ENST00000485479 FAM231AP0DMU4 169 aa8.26□□□□□ -1.09
APTX-227ENST00000485479 FAM231CP0DMU5 169 aa8.26□□□□□ -1.09
APTX-227ENST00000485479 GYPEP15421 78 aa8.26□□□□□ -1.09
APTX-227ENST00000485479 C14orf178Q8N769 122 aaPredicted RBP8.26□□□□□ -1.09
APTX-227ENST00000485479 SLC25A29Q8N8R3 303 aa8.26□□□□□ -1.09
APTX-227ENST00000485479 SFRP2Q96HF1 295 aa8.26□□□□□ -1.09
APTX-227ENST00000485479 SMDT1Q9H4I9 107 aa8.26□□□□□ -1.09
APTX-227ENST00000485479 NDUFS6O75380 124 aaKnown RBP8.25□□□□□ -1.09
APTX-227ENST00000485479 GATA1P15976 413 aaPredicted RBP8.25□□□□□ -1.09
APTX-227ENST00000485479 FAM74A3Q4VXF1 159 aa8.25□□□□□ -1.09
APTX-227ENST00000485479 FAM231DQ6ZW35 169 aa8.25□□□□□ -1.09
APTX-227ENST00000485479 PGLYRP4Q96LB8 373 aa8.25□□□□□ -1.09
APTX-227ENST00000485479 V9GYV3 84 aa8.25□□□□□ -1.09
APTX-227ENST00000485479 A8MWV9 139 aa8.24□□□□□ -1.09
APTX-227ENST00000485479 K7EQD1 137 aa8.24□□□□□ -1.09
APTX-227ENST00000485479 CRYGDP07320 174 aa8.24□□□□□ -1.09
APTX-227ENST00000485479 CXCL1P09341 107 aa8.24□□□□□ -1.09
APTX-227ENST00000485479 RPS20P60866 119 aaKnown RBP8.24□□□□□ -1.09
APTX-227ENST00000485479 UFSP1Q6NVU6 142 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 159.8 ms