RNA–Protein interactions for RNA: ENST00000484822.1

RXRA-203, Transcript of retinoid X receptor alpha, humanhuman

TSL 2

Gene RXRA, Length 5,215 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-203ENST00000484822 A4D1N5 150 aa11.88□□□□□ -0.51
RXRA-203ENST00000484822 POU2AF1Q16633 256 aa11.88□□□□□ -0.51
RXRA-203ENST00000484822 F6UB75 175 aa11.88□□□□□ -0.51
RXRA-203ENST00000484822 Q9H8V8 135 aa11.88□□□□□ -0.51
RXRA-203ENST00000484822 ZNF561-AS1K7EIQ3 104 aa11.87□□□□□ -0.51
RXRA-203ENST00000484822 HERVK_113P63121 156 aa11.87□□□□□ -0.51
RXRA-203ENST00000484822 FOXI1Q12951 378 aa11.87□□□□□ -0.51
RXRA-203ENST00000484822 LINC00311Q8N616 119 aa11.87□□□□□ -0.51
RXRA-203ENST00000484822 G3V4G9 280 aa11.87□□□□□ -0.51
RXRA-203ENST00000484822 IGKV3D-7A0A0C4DH55 119 aa11.86□□□□□ -0.51
RXRA-203ENST00000484822 RPL39LQ96EH5 51 aaKnown RBP11.86□□□□□ -0.51
RXRA-203ENST00000484822 MED13Q9UHV7 2174 aa11.86□□□□□ -0.51
RXRA-203ENST00000484822 MRPL23Q16540 153 aaKnown RBP11.86□□□□□ -0.51
RXRA-203ENST00000484822 MUSTN1Q8IVN3 82 aa11.85□□□□□ -0.51
RXRA-203ENST00000484822 ZGRF1Q86YA3 2104 aa11.85□□□□□ -0.51
RXRA-203ENST00000484822 EML6Q6ZMW3 1958 aa11.85□□□□□ -0.51
RXRA-203ENST00000484822 GTF3C1Q12789 2109 aa11.85□□□□□ -0.51
RXRA-203ENST00000484822 PKIGQ9Y2B9 76 aa11.85□□□□□ -0.51
RXRA-203ENST00000484822 A0A1B0GX51 115 aa11.85□□□□□ -0.51
RXRA-203ENST00000484822 A0A1W2PNU3 283 aaPredicted RBP11.85□□□□□ -0.51
RXRA-203ENST00000484822 LINC01620Q4KN68 170 aa11.85□□□□□ -0.51
RXRA-203ENST00000484822 NDUFA4O00483 81 aa11.85□□□□□ -0.51
RXRA-203ENST00000484822 ACYP1P07311 99 aa11.85□□□□□ -0.51
RXRA-203ENST00000484822 DAD1P61803 113 aa11.84□□□□□ -0.51
RXRA-203ENST00000484822 TNCP24821 2201 aa11.84□□□□□ -0.51
RXRA-203ENST00000484822 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.84□□□□□ -0.51
RXRA-203ENST00000484822 IGKV2-29A2NJV5 120 aaPredicted RBP11.84□□□□□ -0.51
RXRA-203ENST00000484822 ELANEP08246 267 aa11.84□□□□□ -0.51
RXRA-203ENST00000484822 GTSF1Q8WW33 167 aa11.84□□□□□ -0.51
RXRA-203ENST00000484822 HOXD3P31249 432 aaPredicted RBP11.84□□□□□ -0.51
RXRA-203ENST00000484822 IGF2BP2-AS1Q96M15 143 aa11.84□□□□□ -0.51
RXRA-203ENST00000484822 hADV29S1A0JD25 119 aa11.84□□□□□ -0.51
RXRA-203ENST00000484822 Q8NFD4 153 aa11.84□□□□□ -0.51
RXRA-203ENST00000484822 PTH2Q96A98 100 aa11.84□□□□□ -0.51
RXRA-203ENST00000484822 SPANXCQ9NY87 97 aa11.84□□□□□ -0.51
RXRA-203ENST00000484822 CLPSL2Q6UWE3 100 aa11.83□□□□□ -0.52
RXRA-203ENST00000484822 OBSL1O75147 1896 aa11.83□□□□□ -0.52
RXRA-203ENST00000484822 A0A0J9YXV3 536 aa11.83□□□□□ -0.52
RXRA-203ENST00000484822 NKAPP1Q8N9T2 125 aa11.83□□□□□ -0.52
RXRA-203ENST00000484822 PATE2Q6UY27 113 aa11.82□□□□□ -0.52
RXRA-203ENST00000484822 Q71RC1 249 aaPredicted RBP11.82□□□□□ -0.52
RXRA-203ENST00000484822 ORMDL1Q9P0S3 153 aa11.82□□□□□ -0.52
RXRA-203ENST00000484822 ARHGAP21Q5T5U3 1957 aa11.82□□□□□ -0.52
RXRA-203ENST00000484822 RBAKDNA6NC62 111 aa11.82□□□□□ -0.52
RXRA-203ENST00000484822 GP9P14770 177 aa11.82□□□□□ -0.52
RXRA-203ENST00000484822 F5H768 121 aa11.82□□□□□ -0.52
RXRA-203ENST00000484822 RHOHQ15669 191 aa11.81□□□□□ -0.52
RXRA-203ENST00000484822 C5orf47Q569G3 176 aa11.81□□□□□ -0.52
RXRA-203ENST00000484822 HIGD1BQ9P298 99 aa11.81□□□□□ -0.52
RXRA-203ENST00000484822 ICOSQ9Y6W8 199 aa11.81□□□□□ -0.52
RXRA-203ENST00000484822 J3KT08 172 aa11.81□□□□□ -0.52
RXRA-203ENST00000484822 FGF23Q9GZV9 251 aaPredicted RBP11.81□□□□□ -0.52
RXRA-203ENST00000484822 A0A096LPF7 62 aa11.81□□□□□ -0.52
RXRA-203ENST00000484822 PRB2P02812 416 aaPredicted RBP11.81□□□□□ -0.52
RXRA-203ENST00000484822 NACAE9PAV3 2078 aa11.8□□□□□ -0.52
RXRA-203ENST00000484822 KAAG1Q9UBP8 84 aa11.8□□□□□ -0.52
RXRA-203ENST00000484822 DKK4Q9UBT3 224 aa11.8□□□□□ -0.52
RXRA-203ENST00000484822 ATOX1O00244 68 aa11.8□□□□□ -0.52
RXRA-203ENST00000484822 MAPK1IP1LQ8NDC0 245 aa11.8□□□□□ -0.52
RXRA-203ENST00000484822 MRPL53Q96EL3 112 aaKnown RBP11.8□□□□□ -0.52
RXRA-203ENST00000484822 LYPD6Q86Y78 171 aa11.8□□□□□ -0.52
RXRA-203ENST00000484822 H3BUA1 57 aa11.79□□□□□ -0.52
RXRA-203ENST00000484822 DAND5Q8N907 189 aa11.79□□□□□ -0.52
RXRA-203ENST00000484822 A0A0B4J2C4 111 aa11.79□□□□□ -0.52
RXRA-203ENST00000484822 SPATA12Q7Z6I5 190 aa11.79□□□□□ -0.52
RXRA-203ENST00000484822 IGHV7-4-1A0A0J9YVY3 117 aa11.79□□□□□ -0.52
RXRA-203ENST00000484822 COL4A4P53420 1690 aaPredicted RBP11.79□□□□□ -0.52
RXRA-203ENST00000484822 XCL1P47992 114 aa11.78□□□□□ -0.52
RXRA-203ENST00000484822 ZFP2Q6ZN57 461 aa11.78□□□□□ -0.52
RXRA-203ENST00000484822 C9orf66Q5T8R8 295 aa11.78□□□□□ -0.52
RXRA-203ENST00000484822 C11orf53Q8IXP5 236 aa11.78□□□□□ -0.52
RXRA-203ENST00000484822 IGFBPL1Q8WX77 278 aa11.78□□□□□ -0.52
RXRA-203ENST00000484822 FAM167A-AS1Q96KT0 104 aa11.78□□□□□ -0.52
RXRA-203ENST00000484822 SRSF2Q01130 221 aaKnown RBP11.78□□□□□ -0.52
RXRA-203ENST00000484822 C22orf46C9J442 243 aa11.77□□□□□ -0.52
RXRA-203ENST00000484822 VPREB3Q9UKI3 123 aa11.77□□□□□ -0.52
RXRA-203ENST00000484822 IGKV1-17P01599 117 aa11.77□□□□□ -0.53
RXRA-203ENST00000484822 ANGP03950 147 aaKnown RBP11.77□□□□□ -0.53
RXRA-203ENST00000484822 RNF183Q96D59 192 aa11.77□□□□□ -0.53
RXRA-203ENST00000484822 RPL39P62891 51 aaKnown RBP11.77□□□□□ -0.53
RXRA-203ENST00000484822 SLC25A29Q8N8R3 303 aa11.77□□□□□ -0.53
RXRA-203ENST00000484822 FAM208BQ5VWN6 2430 aa11.77□□□□□ -0.53
RXRA-203ENST00000484822 C2orf70A6NJV1 201 aa11.76□□□□□ -0.53
RXRA-203ENST00000484822 C5orf38Q86SI9 138 aa11.76□□□□□ -0.53
RXRA-203ENST00000484822 IL17DQ8TAD2 202 aa11.76□□□□□ -0.53
RXRA-203ENST00000484822 TP73-AS1Q9UF72 201 aa11.76□□□□□ -0.53
RXRA-203ENST00000484822 DAZAP2Q15038 168 aaPredicted RBP11.75□□□□□ -0.53
RXRA-203ENST00000484822 TRAV4A0A0B4J268 109 aa11.75□□□□□ -0.53
RXRA-203ENST00000484822 CLEC2BQ92478 149 aa11.75□□□□□ -0.53
RXRA-203ENST00000484822 IGHV4-4A0A075B6R2 117 aa11.75□□□□□ -0.53
RXRA-203ENST00000484822 IGHG2P01859 326 aa11.75□□□□□ -0.53
RXRA-203ENST00000484822 ODF1Q14990 250 aa11.75□□□□□ -0.53
RXRA-203ENST00000484822 SND1-IT1Q9HBX3 110 aa11.75□□□□□ -0.53
RXRA-203ENST00000484822 DSCAML1Q8TD84 2053 aa11.75□□□□□ -0.53
RXRA-203ENST00000484822 IGKV1OR2-108A0A075B7D4 117 aa11.74□□□□□ -0.53
RXRA-203ENST00000484822 GRNP28799 593 aaKnown RBP11.74□□□□□ -0.53
RXRA-203ENST00000484822 LENEPQ9Y5L5 61 aa11.74□□□□□ -0.53
RXRA-203ENST00000484822 KRTAP27-1Q3LI81 207 aa11.74□□□□□ -0.53
RXRA-203ENST00000484822 DEFB105AQ8NG35 78 aa11.74□□□□□ -0.53
RXRA-203ENST00000484822 PTPRQQ9UMZ3 2332 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms