RNA–Protein interactions for RNA: ENST00000484729.2

HLA-DQB1-208, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-208ENST00000484729 TRAV8-1A0A0A6YYK1 113 aa10.34□□□□□ -0.75
HLA-DQB1-208ENST00000484729 LOC100131303A0A0U1RQF7 123 aa10.34□□□□□ -0.75
HLA-DQB1-208ENST00000484729 TYMSP04818 313 aa10.34□□□□□ -0.75
HLA-DQB1-208ENST00000484729 FGF8P55075 233 aaPredicted RBP10.34□□□□□ -0.75
HLA-DQB1-208ENST00000484729 DPPA3Q6W0C5 159 aa10.34□□□□□ -0.75
HLA-DQB1-208ENST00000484729 NHLRC2Q8NBF2 726 aa10.34□□□□□ -0.75
HLA-DQB1-208ENST00000484729 SDF2L1Q9HCN8 221 aa10.34□□□□□ -0.75
HLA-DQB1-208ENST00000484729 TREM1Q9NP99 234 aa10.34□□□□□ -0.75
HLA-DQB1-208ENST00000484729 TMEM167BQ9NRX6 74 aa10.34□□□□□ -0.75
HLA-DQB1-208ENST00000484729 K7EP13 123 aa10.33□□□□□ -0.76
HLA-DQB1-208ENST00000484729 CRYGDP07320 174 aa10.33□□□□□ -0.76
HLA-DQB1-208ENST00000484729 FHITP49789 147 aa10.33□□□□□ -0.76
HLA-DQB1-208ENST00000484729 PPT1P50897 306 aa10.33□□□□□ -0.76
HLA-DQB1-208ENST00000484729 TVP23CQ96ET8 276 aa10.33□□□□□ -0.76
HLA-DQB1-208ENST00000484729 C10orf126Q8N4M7 172 aa10.32□□□□□ -0.76
HLA-DQB1-208ENST00000484729 KCNS1Q96KK3 526 aa10.32□□□□□ -0.76
HLA-DQB1-208ENST00000484729 SGK494Q96LW2 274 aa10.32□□□□□ -0.76
HLA-DQB1-208ENST00000484729 NDFIP1Q9BT67 221 aa10.32□□□□□ -0.76
HLA-DQB1-208ENST00000484729 A0A1B0GV50 99 aa10.31□□□□□ -0.76
HLA-DQB1-208ENST00000484729 KRTAP29-1A8MX34 341 aaPredicted RBP10.31□□□□□ -0.76
HLA-DQB1-208ENST00000484729 GATA1P15976 413 aaPredicted RBP10.31□□□□□ -0.76
HLA-DQB1-208ENST00000484729 RAB5CP51148 216 aa10.31□□□□□ -0.76
HLA-DQB1-208ENST00000484729 SH2D6Q7Z4S9 175 aa10.31□□□□□ -0.76
HLA-DQB1-208ENST00000484729 ARL6IP6Q8N6S5 226 aa10.31□□□□□ -0.76
HLA-DQB1-208ENST00000484729 SFT2D1Q8WV19 159 aa10.31□□□□□ -0.76
HLA-DQB1-208ENST00000484729 BOLA1Q9Y3E2 137 aa10.31□□□□□ -0.76
HLA-DQB1-208ENST00000484729 FBLL1A6NHQ2 334 aaKnown RBP10.3□□□□□ -0.76
HLA-DQB1-208ENST00000484729 H2AFB1P0C5Y9 115 aa10.3□□□□□ -0.76
HLA-DQB1-208ENST00000484729 SULT1A2P50226 295 aa10.3□□□□□ -0.76
HLA-DQB1-208ENST00000484729 UBE2G2P60604 165 aa10.3□□□□□ -0.76
HLA-DQB1-208ENST00000484729 IGHV3-38A0A0C4DH36 116 aa10.29□□□□□ -0.76
HLA-DQB1-208ENST00000484729 SERTM2A0A1B0GWG4 89 aa10.29□□□□□ -0.76
HLA-DQB1-208ENST00000484729 PSCAO43653 123 aa10.29□□□□□ -0.76
HLA-DQB1-208ENST00000484729 ALKAL2Q6UX46 152 aa10.29□□□□□ -0.76
HLA-DQB1-208ENST00000484729 SUN5Q8TC36 379 aa10.29□□□□□ -0.76
HLA-DQB1-208ENST00000484729 TMEM70Q9BUB7 260 aa10.29□□□□□ -0.76
HLA-DQB1-208ENST00000484729 FAM30AQ9NZY2 134 aa10.29□□□□□ -0.76
HLA-DQB1-208ENST00000484729 IGLV5-52A0A0A0MRZ9 124 aa10.28□□□□□ -0.76
HLA-DQB1-208ENST00000484729 IGHV3-73A0A0B4J1V6 119 aa10.28□□□□□ -0.76
HLA-DQB1-208ENST00000484729 TEX46H3BTG2 121 aa10.28□□□□□ -0.76
HLA-DQB1-208ENST00000484729 TCRAP04437 139 aa10.28□□□□□ -0.76
HLA-DQB1-208ENST00000484729 TIRAPP58753 221 aa10.28□□□□□ -0.76
HLA-DQB1-208ENST00000484729 ZNF876PQ49A33 203 aa10.28□□□□□ -0.76
HLA-DQB1-208ENST00000484729 SLC25A29Q8N8R3 303 aa10.28□□□□□ -0.76
HLA-DQB1-208ENST00000484729 C5orf17Q8NAS9 161 aa10.28□□□□□ -0.76
HLA-DQB1-208ENST00000484729 MBD3L1Q8WWY6 194 aa10.28□□□□□ -0.76
HLA-DQB1-208ENST00000484729 PRADC1Q9BSG0 188 aa10.28□□□□□ -0.76
HLA-DQB1-208ENST00000484729 HMCN2Q8NDA2 5059 aa10.27□□□□□ -0.77
HLA-DQB1-208ENST00000484729 TRAV8-6A0A0B4J262 113 aa10.27□□□□□ -0.77
HLA-DQB1-208ENST00000484729 GGTLC3B5MD39 225 aa10.27□□□□□ -0.77
HLA-DQB1-208ENST00000484729 K7EQM0 130 aa10.27□□□□□ -0.77
HLA-DQB1-208ENST00000484729 GCGP01275 180 aa10.27□□□□□ -0.77
HLA-DQB1-208ENST00000484729 PFN1P07737 140 aaKnown RBP10.27□□□□□ -0.77
HLA-DQB1-208ENST00000484729 ZNF80P51504 273 aaPredicted RBP10.27□□□□□ -0.77
HLA-DQB1-208ENST00000484729 RHOHQ15669 191 aa10.27□□□□□ -0.77
HLA-DQB1-208ENST00000484729 LINC01556Q5JQF7 62 aa10.27□□□□□ -0.77
HLA-DQB1-208ENST00000484729 OR10J3Q5JRS4 329 aa10.27□□□□□ -0.77
HLA-DQB1-208ENST00000484729 SERTAD4-AS1Q5TG53 156 aa10.27□□□□□ -0.77
HLA-DQB1-208ENST00000484729 Q9HAA7 133 aa10.27□□□□□ -0.77
HLA-DQB1-208ENST00000484729 C11orf21Q9P2W6 132 aa10.27□□□□□ -0.77
HLA-DQB1-208ENST00000484729 PSG8Q9UQ74 426 aa10.27□□□□□ -0.77
HLA-DQB1-208ENST00000484729 A0A1W2PRE2 83 aa10.26□□□□□ -0.77
HLA-DQB1-208ENST00000484729 RS1O15537 224 aa10.26□□□□□ -0.77
HLA-DQB1-208ENST00000484729 IFNA7P01567 189 aa10.26□□□□□ -0.77
HLA-DQB1-208ENST00000484729 SUMO1P63165 101 aaKnown RBP10.26□□□□□ -0.77
HLA-DQB1-208ENST00000484729 CFAP126Q5VTH2 177 aa10.26□□□□□ -0.77
HLA-DQB1-208ENST00000484729 CST9LP1Q5W188 147 aa10.26□□□□□ -0.77
HLA-DQB1-208ENST00000484729 TMEM75Q8N9X5 138 aa10.26□□□□□ -0.77
HLA-DQB1-208ENST00000484729 SYT8Q8NBV8 401 aa10.26□□□□□ -0.77
HLA-DQB1-208ENST00000484729 TRBV6-4A0A1B0GX49 114 aa10.25□□□□□ -0.77
HLA-DQB1-208ENST00000484729 FAM74A7A6NL05 159 aa10.25□□□□□ -0.77
HLA-DQB1-208ENST00000484729 IGHV3-30P01768 117 aa10.25□□□□□ -0.77
HLA-DQB1-208ENST00000484729 IGHV3-33P01772 117 aa10.25□□□□□ -0.77
HLA-DQB1-208ENST00000484729 IGHV3-30-3P0DP02 117 aa10.25□□□□□ -0.77
HLA-DQB1-208ENST00000484729 IGHV3-30-5P0DP03 117 aa10.25□□□□□ -0.77
HLA-DQB1-208ENST00000484729 FLI1Q01543 452 aaPredicted RBP10.25□□□□□ -0.77
HLA-DQB1-208ENST00000484729 SMUG1Q53HV7 270 aa10.25□□□□□ -0.77
HLA-DQB1-208ENST00000484729 PRNTQ86SH4 94 aa10.25□□□□□ -0.77
HLA-DQB1-208ENST00000484729 C9orf85Q96MD7 179 aa10.25□□□□□ -0.77
HLA-DQB1-208ENST00000484729 IBA57-AS1B1ANH7 110 aa10.24□□□□□ -0.77
HLA-DQB1-208ENST00000484729 CIDEAO60543 219 aa10.24□□□□□ -0.77
HLA-DQB1-208ENST00000484729 PLA2G1BP04054 148 aaKnown RBP10.24□□□□□ -0.77
HLA-DQB1-208ENST00000484729 ZNF506Q5JVG8 444 aa10.24□□□□□ -0.77
HLA-DQB1-208ENST00000484729 CYB561D1Q8N8Q1 229 aa10.24□□□□□ -0.77
HLA-DQB1-208ENST00000484729 NKX6-2Q9C056 277 aaPredicted RBP10.24□□□□□ -0.77
HLA-DQB1-208ENST00000484729 ARL2-SNX15V9GYD0 113 aa10.24□□□□□ -0.77
HLA-DQB1-208ENST00000484729 TRAV1-1A0A0B4J248 108 aa10.23□□□□□ -0.77
HLA-DQB1-208ENST00000484729 LRCOL1A6NCL2 159 aa10.23□□□□□ -0.77
HLA-DQB1-208ENST00000484729 PGPEP1LA6NFU8 196 aa10.23□□□□□ -0.77
HLA-DQB1-208ENST00000484729 PAGE4O60829 102 aa10.23□□□□□ -0.77
HLA-DQB1-208ENST00000484729 IGLV2-11P01706 119 aa10.23□□□□□ -0.77
HLA-DQB1-208ENST00000484729 LELP1Q5T871 98 aa10.23□□□□□ -0.77
HLA-DQB1-208ENST00000484729 MANBALQ9NQG1 85 aa10.23□□□□□ -0.77
HLA-DQB1-208ENST00000484729 GNG13Q9P2W3 67 aa10.23□□□□□ -0.77
HLA-DQB1-208ENST00000484729 EPDR1Q9UM22 224 aa10.23□□□□□ -0.77
HLA-DQB1-208ENST00000484729 IFNA1P01562 189 aa10.22□□□□□ -0.77
HLA-DQB1-208ENST00000484729 MGST1P10620 155 aaKnown RBP10.22□□□□□ -0.77
HLA-DQB1-208ENST00000484729 BLOC1S1P78537 153 aa10.22□□□□□ -0.77
HLA-DQB1-208ENST00000484729 LINC00528Q8N1L1 170 aa10.22□□□□□ -0.77
HLA-DQB1-208ENST00000484729 ATP6V0E2Q8NHE4 81 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms