RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 MIC13Q5XKP0 118 aa1.46□□□□□ -2.18
VPS13A-211ENST00000484581 ARL11Q969Q4 196 aa1.46□□□□□ -2.18
VPS13A-211ENST00000484581 SPAG17Q6Q759 2223 aa1.46□□□□□ -2.18
VPS13A-211ENST00000484581 OTOGLQ3ZCN5 2332 aa1.45□□□□□ -2.18
VPS13A-211ENST00000484581 TRAV17A0A0B4J275 112 aa1.45□□□□□ -2.18
VPS13A-211ENST00000484581 HIGD1CA8MV81 97 aa1.45□□□□□ -2.18
VPS13A-211ENST00000484581 EFNA4P52798 201 aa1.45□□□□□ -2.18
VPS13A-211ENST00000484581 RRAS2P62070 204 aaPredicted RBP1.45□□□□□ -2.18
VPS13A-211ENST00000484581 EMX2Q04743 252 aa1.45□□□□□ -2.18
VPS13A-211ENST00000484581 RPL13AP3Q6NVV1 102 aa1.45□□□□□ -2.18
VPS13A-211ENST00000484581 Q6ZUT4 128 aa1.45□□□□□ -2.18
VPS13A-211ENST00000484581 DEFB132Q7Z7B7 95 aa1.45□□□□□ -2.18
VPS13A-211ENST00000484581 CCDC167Q9P0B6 97 aa1.45□□□□□ -2.18
VPS13A-211ENST00000484581 ADGRB1O14514 1584 aa1.45□□□□□ -2.18
VPS13A-211ENST00000484581 MYH7P12883 1935 aa1.44□□□□□ -2.18
VPS13A-211ENST00000484581 ROS1P08922 2347 aa1.44□□□□□ -2.18
VPS13A-211ENST00000484581 TRBV10-1A0A0K0K1A3 114 aa1.44□□□□□ -2.18
VPS13A-211ENST00000484581 CCDC179H3BU77 68 aa1.44□□□□□ -2.18
VPS13A-211ENST00000484581 GNG7O60262 68 aa1.44□□□□□ -2.18
VPS13A-211ENST00000484581 LINC01545Q5VT33 79 aa1.44□□□□□ -2.18
VPS13A-211ENST00000484581 LINC00575Q6W349 94 aa1.44□□□□□ -2.18
VPS13A-211ENST00000484581 VSTM2AQ8TAG5 236 aa1.44□□□□□ -2.18
VPS13A-211ENST00000484581 PSMG3Q9BT73 122 aaPredicted RBP1.44□□□□□ -2.18
VPS13A-211ENST00000484581 TMEM2Q9UHN6 1383 aa1.44□□□□□ -2.18
VPS13A-211ENST00000484581 AKAP11Q9UKA4 1901 aa1.44□□□□□ -2.18
VPS13A-211ENST00000484581 GRIN2AQ12879 1464 aa1.43□□□□□ -2.18
VPS13A-211ENST00000484581 KRTAP10-4P60372 401 aaPredicted RBP1.43□□□□□ -2.18
VPS13A-211ENST00000484581 IQCJQ1A5X6 159 aa1.43□□□□□ -2.18
VPS13A-211ENST00000484581 KCNRGQ8N5I3 272 aa1.43□□□□□ -2.18
VPS13A-211ENST00000484581 DPH3Q96FX2 82 aa1.43□□□□□ -2.18
VPS13A-211ENST00000484581 IBTKQ9P2D0 1353 aaPredicted RBP1.43□□□□□ -2.18
VPS13A-211ENST00000484581 CCKP06307 115 aa1.42□□□□□ -2.18
VPS13A-211ENST00000484581 SLC25A6P12236 298 aa1.42□□□□□ -2.18
VPS13A-211ENST00000484581 SPCS2Q15005 226 aa1.42□□□□□ -2.18
VPS13A-211ENST00000484581 XAF1Q6GPH4 301 aa1.42□□□□□ -2.18
VPS13A-211ENST00000484581 Q6ZQY7 126 aa1.42□□□□□ -2.18
VPS13A-211ENST00000484581 NDUFA11Q86Y39 141 aa1.42□□□□□ -2.18
VPS13A-211ENST00000484581 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.41□□□□□ -2.18
VPS13A-211ENST00000484581 TRAV12-2A0A075B6T6 113 aa1.41□□□□□ -2.18
VPS13A-211ENST00000484581 FAM25AB3EWG3 89 aa1.41□□□□□ -2.18
VPS13A-211ENST00000484581 FAM25CB3EWG5 89 aa1.41□□□□□ -2.18
VPS13A-211ENST00000484581 FAM25GB3EWG6 89 aa1.41□□□□□ -2.18
VPS13A-211ENST00000484581 LOC101927531A0A1B0GV80 90 aa1.4□□□□□ -2.19
VPS13A-211ENST00000484581 FAM92AA1XBS5 289 aa1.4□□□□□ -2.19
VPS13A-211ENST00000484581 SPANXN1Q5VSR9 72 aa1.4□□□□□ -2.19
VPS13A-211ENST00000484581 NDUFA12Q9UI09 145 aa1.4□□□□□ -2.19
VPS13A-211ENST00000484581 CNTRLQ7Z7A1 2325 aa1.4□□□□□ -2.19
VPS13A-211ENST00000484581 FOCADQ5VW36 1801 aa1.4□□□□□ -2.19
VPS13A-211ENST00000484581 MYOM3Q5VTT5 1437 aa1.4□□□□□ -2.19
VPS13A-211ENST00000484581 KIAA0100Q14667 2235 aaKnown RBP1.39□□□□□ -2.19
VPS13A-211ENST00000484581 NBDYA0A0U1RRE5 68 aa1.39□□□□□ -2.19
VPS13A-211ENST00000484581 APOC1P02654 83 aa1.39□□□□□ -2.19
VPS13A-211ENST00000484581 PRB4P10163 310 aaPredicted RBP1.39□□□□□ -2.19
VPS13A-211ENST00000484581 FXYD3Q14802 87 aa1.39□□□□□ -2.19
VPS13A-211ENST00000484581 OR2T2Q6IF00 324 aa1.39□□□□□ -2.19
VPS13A-211ENST00000484581 CCL19Q99731 98 aa1.39□□□□□ -2.19
VPS13A-211ENST00000484581 AFDNP55196 1824 aaKnown RBP1.38□□□□□ -2.19
VPS13A-211ENST00000484581 FCGBPQ9Y6R7 5405 aaPredicted RBP1.38□□□□□ -2.19
VPS13A-211ENST00000484581 TRBV30A0A0K0K1B3 111 aa1.38□□□□□ -2.19
VPS13A-211ENST00000484581 PIRTP0C851 137 aa1.38□□□□□ -2.19
VPS13A-211ENST00000484581 CAV3P56539 151 aa1.38□□□□□ -2.19
VPS13A-211ENST00000484581 C5orf56Q8N8D9 126 aa1.38□□□□□ -2.19
VPS13A-211ENST00000484581 LINC00208Q96KT6 92 aa1.38□□□□□ -2.19
VPS13A-211ENST00000484581 HELZ2Q9BYK8 2649 aaKnown RBP1.38□□□□□ -2.19
VPS13A-211ENST00000484581 DLEC1Q9Y238 1755 aa1.38□□□□□ -2.19
VPS13A-211ENST00000484581 ABCA4P78363 2273 aa1.38□□□□□ -2.19
VPS13A-211ENST00000484581 TEX49A0A1B0GTD5 131 aa1.37□□□□□ -2.19
VPS13A-211ENST00000484581 A0A1B0GV90 55 aa1.37□□□□□ -2.19
VPS13A-211ENST00000484581 DLEU1O43261 78 aa1.37□□□□□ -2.19
VPS13A-211ENST00000484581 TFF1P04155 84 aa1.37□□□□□ -2.19
VPS13A-211ENST00000484581 TMEM242Q9NWH2 141 aa1.37□□□□□ -2.19
VPS13A-211ENST00000484581 PHLPP1O60346 1717 aa1.37□□□□□ -2.19
VPS13A-211ENST00000484581 APODP05090 189 aa1.36□□□□□ -2.19
VPS13A-211ENST00000484581 IL5P05113 134 aa1.36□□□□□ -2.19
VPS13A-211ENST00000484581 PIPP12273 146 aaPredicted RBP1.36□□□□□ -2.19
VPS13A-211ENST00000484581 C10orf99Q6UWK7 81 aa1.36□□□□□ -2.19
VPS13A-211ENST00000484581 Q6ZS92 163 aa1.36□□□□□ -2.19
VPS13A-211ENST00000484581 Q86TA4 180 aa1.36□□□□□ -2.19
VPS13A-211ENST00000484581 Q8N6K4 173 aa1.36□□□□□ -2.19
VPS13A-211ENST00000484581 COPS9Q8WXC6 57 aa1.36□□□□□ -2.19
VPS13A-211ENST00000484581 SPTSSAQ969W0 71 aa1.36□□□□□ -2.19
VPS13A-211ENST00000484581 TMEM141Q96I45 108 aa1.36□□□□□ -2.19
VPS13A-211ENST00000484581 SNRNP25Q9BV90 132 aaKnown RBP1.36□□□□□ -2.19
VPS13A-211ENST00000484581 PTPRMP28827 1452 aa1.36□□□□□ -2.19
VPS13A-211ENST00000484581 CDK12Q9NYV4 1490 aaPredicted RBP1.36□□□□□ -2.19
VPS13A-211ENST00000484581 LAMA4Q16363 1823 aa1.36□□□□□ -2.19
VPS13A-211ENST00000484581 NCOA3Q9Y6Q9 1424 aa1.35□□□□□ -2.19
VPS13A-211ENST00000484581 NDUFB6O95139 128 aa1.35□□□□□ -2.19
VPS13A-211ENST00000484581 MEIG1Q5JSS6 88 aa1.35□□□□□ -2.19
VPS13A-211ENST00000484581 TSKUQ8WUA8 353 aa1.35□□□□□ -2.19
VPS13A-211ENST00000484581 IFI27L1Q96BM0 104 aa1.35□□□□□ -2.19
VPS13A-211ENST00000484581 AGPAT4-IT1Q9H0P7 198 aa1.35□□□□□ -2.19
VPS13A-211ENST00000484581 ROCK2O75116 1388 aaKnown RBP1.34□□□□□ -2.19
VPS13A-211ENST00000484581 ESPL1Q14674 2120 aa1.34□□□□□ -2.19
VPS13A-211ENST00000484581 A0A1W2PPM0 123 aa1.34□□□□□ -2.19
VPS13A-211ENST00000484581 HIST1H1DP16402 221 aaKnown RBP1.34□□□□□ -2.19
VPS13A-211ENST00000484581 FGF7P21781 194 aa1.34□□□□□ -2.19
VPS13A-211ENST00000484581 BTG2P78543 158 aa1.34□□□□□ -2.19
VPS13A-211ENST00000484581 C9orf116Q5BN46 136 aaPredicted RBP1.34□□□□□ -2.19
VPS13A-211ENST00000484581 SLC48A1Q6P1K1 146 aa1.34□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms