RNA–Protein interactions for RNA: ENST00000483690.1

MCF2-207, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

TSL 3

Gene MCF2, Length 752 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-207ENST00000483690 CDC42BPGQ6DT37 1551 aa1.76□□□□□ -2.13
MCF2-207ENST00000483690 NRXN1Q9ULB1 1477 aa1.76□□□□□ -2.13
MCF2-207ENST00000483690 PRORSD1PA6NEY8 169 aa1.76□□□□□ -2.13
MCF2-207ENST00000483690 JMJD7-PLA2G4BH0Y9G9 81 aa1.76□□□□□ -2.13
MCF2-207ENST00000483690 PPYP01298 95 aa1.76□□□□□ -2.13
MCF2-207ENST00000483690 FABP2P12104 132 aa1.76□□□□□ -2.13
MCF2-207ENST00000483690 SMIM21Q3B7S5 101 aa1.76□□□□□ -2.13
MCF2-207ENST00000483690 Q8N6K4 173 aa1.76□□□□□ -2.13
MCF2-207ENST00000483690 SKA2Q8WVK7 121 aaPredicted RBP1.76□□□□□ -2.13
MCF2-207ENST00000483690 WFDC10AQ9H1F0 79 aa1.76□□□□□ -2.13
MCF2-207ENST00000483690 TCEAL2Q9H3H9 227 aaPredicted RBP1.76□□□□□ -2.13
MCF2-207ENST00000483690 TPRKBQ9Y3C4 175 aa1.76□□□□□ -2.13
MCF2-207ENST00000483690 RGPD3A6NKT7 1758 aaPredicted RBP1.76□□□□□ -2.13
MCF2-207ENST00000483690 RGPD4Q7Z3J3 1758 aa1.76□□□□□ -2.13
MCF2-207ENST00000483690 IFT172Q9UG01 1749 aa1.76□□□□□ -2.13
MCF2-207ENST00000483690 ADGRB1O14514 1584 aa1.76□□□□□ -2.13
MCF2-207ENST00000483690 ASCC3Q8N3C0 2202 aaKnown RBP1.75□□□□□ -2.13
MCF2-207ENST00000483690 TNRC6CQ9HCJ0 1690 aaKnown RBP1.75□□□□□ -2.13
MCF2-207ENST00000483690 BCL2P10415 239 aa1.75□□□□□ -2.13
MCF2-207ENST00000483690 S100GP29377 79 aa1.75□□□□□ -2.13
MCF2-207ENST00000483690 DNAJB13P59910 316 aa1.75□□□□□ -2.13
MCF2-207ENST00000483690 MRPS36P82909 103 aaKnown RBP1.75□□□□□ -2.13
MCF2-207ENST00000483690 GRPEL2Q8TAA5 225 aa1.75□□□□□ -2.13
MCF2-207ENST00000483690 PRO3102Q9H379 93 aa1.75□□□□□ -2.13
MCF2-207ENST00000483690 HSPB8Q9UJY1 196 aa1.75□□□□□ -2.13
MCF2-207ENST00000483690 ZNF609O15014 1411 aa1.74□□□□□ -2.13
MCF2-207ENST00000483690 NSD3Q9BZ95 1437 aa1.74□□□□□ -2.13
MCF2-207ENST00000483690 KNDC1Q76NI1 1749 aa1.74□□□□□ -2.13
MCF2-207ENST00000483690 ANKRD36BQ8N2N9 1353 aa1.74□□□□□ -2.13
MCF2-207ENST00000483690 ALS2Q96Q42 1657 aa1.74□□□□□ -2.13
MCF2-207ENST00000483690 LRRC37A3O60309 1634 aa1.74□□□□□ -2.13
MCF2-207ENST00000483690 PAPPAQ13219 1627 aa1.74□□□□□ -2.13
MCF2-207ENST00000483690 A0A1W2PRE2 83 aa1.74□□□□□ -2.13
MCF2-207ENST00000483690 FAM92AA1XBS5 289 aa1.74□□□□□ -2.13
MCF2-207ENST00000483690 E7EQ34 232 aa1.74□□□□□ -2.13
MCF2-207ENST00000483690 GABARAPH6UMI1 98 aa1.74□□□□□ -2.13
MCF2-207ENST00000483690 TPST1O60507 370 aa1.74□□□□□ -2.13
MCF2-207ENST00000483690 EMX2Q04743 252 aa1.74□□□□□ -2.13
MCF2-207ENST00000483690 VMA21Q3ZAQ7 101 aa1.74□□□□□ -2.13
MCF2-207ENST00000483690 TOMM20LQ6UXN7 152 aa1.74□□□□□ -2.13
MCF2-207ENST00000483690 OR4B1Q8NGF8 309 aa1.74□□□□□ -2.13
MCF2-207ENST00000483690 C14orf144Q96I85 54 aa1.74□□□□□ -2.13
MCF2-207ENST00000483690 CST11Q9H112 138 aa1.74□□□□□ -2.13
MCF2-207ENST00000483690 CNTRLQ7Z7A1 2325 aa1.74□□□□□ -2.13
MCF2-207ENST00000483690 A0A0C4DFX4 3053 aa1.74□□□□□ -2.13
MCF2-207ENST00000483690 CRYBG1Q9Y4K1 1723 aa1.74□□□□□ -2.13
MCF2-207ENST00000483690 KIF1AQ12756 1690 aa1.74□□□□□ -2.13
MCF2-207ENST00000483690 RGPD5Q99666 1765 aa1.73□□□□□ -2.13
MCF2-207ENST00000483690 C5orf58C9J3I9 102 aa1.73□□□□□ -2.13
MCF2-207ENST00000483690 H7BYZ3 331 aa1.73□□□□□ -2.13
MCF2-207ENST00000483690 FAM107AO95990 144 aa1.73□□□□□ -2.13
MCF2-207ENST00000483690 S100A11P31949 105 aa1.73□□□□□ -2.13
MCF2-207ENST00000483690 RBP2P50120 134 aa1.73□□□□□ -2.13
MCF2-207ENST00000483690 MIR22HGQ0VDD5 57 aa1.73□□□□□ -2.13
MCF2-207ENST00000483690 SAMD13Q5VXD3 122 aa1.73□□□□□ -2.13
MCF2-207ENST00000483690 OR9Q1Q8NGQ5 310 aa1.73□□□□□ -2.13
MCF2-207ENST00000483690 PPP3R2Q96LZ3 170 aa1.73□□□□□ -2.13
MCF2-207ENST00000483690 OR4C12Q96R67 309 aa1.73□□□□□ -2.13
MCF2-207ENST00000483690 VPS25Q9BRG1 176 aa1.73□□□□□ -2.13
MCF2-207ENST00000483690 SPANXCQ9NY87 97 aa1.73□□□□□ -2.13
MCF2-207ENST00000483690 JPT1Q9UK76 154 aa1.73□□□□□ -2.13
MCF2-207ENST00000483690 PARP4Q9UKK3 1724 aaKnown RBP1.73□□□□□ -2.13
MCF2-207ENST00000483690 NUP210Q8TEM1 1887 aaPredicted RBP1.73□□□□□ -2.13
MCF2-207ENST00000483690 ANKARQ7Z5J8 1434 aa1.73□□□□□ -2.13
MCF2-207ENST00000483690 LMO7Q8WWI1 1683 aa1.72□□□□□ -2.13
MCF2-207ENST00000483690 ARL5CA6NH57 179 aa1.72□□□□□ -2.13
MCF2-207ENST00000483690 TNFSF15O95150 251 aa1.72□□□□□ -2.13
MCF2-207ENST00000483690 TSPAN19P0C672 248 aa1.72□□□□□ -2.13
MCF2-207ENST00000483690 FABP4P15090 132 aa1.72□□□□□ -2.13
MCF2-207ENST00000483690 SDC2P34741 201 aa1.72□□□□□ -2.13
MCF2-207ENST00000483690 DIAPH2-AS1Q14236 149 aa1.72□□□□□ -2.13
MCF2-207ENST00000483690 SPATA45Q537H7 98 aa1.72□□□□□ -2.13
MCF2-207ENST00000483690 TMEM128Q5BJH2 165 aa1.72□□□□□ -2.13
MCF2-207ENST00000483690 FOXI2Q6ZQN5 318 aa1.72□□□□□ -2.13
MCF2-207ENST00000483690 COPZ2Q9P299 210 aa1.72□□□□□ -2.13
MCF2-207ENST00000483690 SBF2Q86WG5 1849 aa1.72□□□□□ -2.13
MCF2-207ENST00000483690 WNK3Q9BYP7 1800 aa1.72□□□□□ -2.13
MCF2-207ENST00000483690 PKD1L2Q7Z442 2459 aa1.72□□□□□ -2.13
MCF2-207ENST00000483690 NFAT5O94916 1531 aa1.71□□□□□ -2.14
MCF2-207ENST00000483690 CD163L1Q9NR16 1453 aa1.71□□□□□ -2.14
MCF2-207ENST00000483690 TRAV23DV6A0A075B6W5 121 aa1.71□□□□□ -2.14
MCF2-207ENST00000483690 IGF2P01344 180 aa1.71□□□□□ -2.14
MCF2-207ENST00000483690 NDUFA6P56556 154 aa1.71□□□□□ -2.14
MCF2-207ENST00000483690 CKS1BP61024 79 aa1.71□□□□□ -2.14
MCF2-207ENST00000483690 DIRC1Q969H9 104 aa1.71□□□□□ -2.14
MCF2-207ENST00000483690 EFCAB11Q9BUY7 163 aa1.71□□□□□ -2.14
MCF2-207ENST00000483690 TAF9BQ9HBM6 251 aa1.71□□□□□ -2.14
MCF2-207ENST00000483690 NIT2Q9NQR4 276 aa1.71□□□□□ -2.14
MCF2-207ENST00000483690 CALML5Q9NZT1 146 aa1.71□□□□□ -2.14
MCF2-207ENST00000483690 RGPD2P0DJD1 1756 aa1.71□□□□□ -2.14
MCF2-207ENST00000483690 AKAP12Q02952 1782 aa1.71□□□□□ -2.14
MCF2-207ENST00000483690 CPSF1Q10570 1443 aaKnown RBP1.71□□□□□ -2.14
MCF2-207ENST00000483690 SPTBN5Q9NRC6 3674 aaKnown RBP1.71□□□□□ -2.14
MCF2-207ENST00000483690 KTN1Q86UP2 1357 aaKnown RBP1.71□□□□□ -2.14
MCF2-207ENST00000483690 QRICH2Q9H0J4 1663 aa1.71□□□□□ -2.14
MCF2-207ENST00000483690 BORCS7-ASMTA0A0B4J1R7 106 aa1.7□□□□□ -2.14
MCF2-207ENST00000483690 K7ERU9 68 aa1.7□□□□□ -2.14
MCF2-207ENST00000483690 AKR1D1P51857 326 aa1.7□□□□□ -2.14
MCF2-207ENST00000483690 RRAS2P62070 204 aaPredicted RBP1.7□□□□□ -2.14
MCF2-207ENST00000483690 MRPS10P82664 201 aaKnown RBP1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms