RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 NBR2O15453 112 aa9□□□□□ -0.97
VTI1A-205ENST00000483122 CTSGP08311 255 aa9□□□□□ -0.97
VTI1A-205ENST00000483122 DEFB104AQ8WTQ1 72 aa9□□□□□ -0.97
VTI1A-205ENST00000483122 ODF3Q96PU9 254 aa9□□□□□ -0.97
VTI1A-205ENST00000483122 KAAG1Q9UBP8 84 aa9□□□□□ -0.97
VTI1A-205ENST00000483122 H7C2G1 150 aa9□□□□□ -0.97
VTI1A-205ENST00000483122 DUSP14O95147 198 aaKnown RBP9□□□□□ -0.97
VTI1A-205ENST00000483122 IGFL3Q6UXB1 125 aa9□□□□□ -0.97
VTI1A-205ENST00000483122 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9□□□□□ -0.97
VTI1A-205ENST00000483122 CHD8Q9HCK8 2581 aa8.99□□□□□ -0.97
VTI1A-205ENST00000483122 LY6LH3BQJ8 138 aa8.99□□□□□ -0.97
VTI1A-205ENST00000483122 ELANEP08246 267 aa8.99□□□□□ -0.97
VTI1A-205ENST00000483122 NDPQ00604 133 aa8.99□□□□□ -0.97
VTI1A-205ENST00000483122 SLC25A29Q8N8R3 303 aa8.99□□□□□ -0.97
VTI1A-205ENST00000483122 C15orf53Q8NAA6 179 aa8.99□□□□□ -0.97
VTI1A-205ENST00000483122 RNF5Q99942 180 aa8.99□□□□□ -0.97
VTI1A-205ENST00000483122 ANKRD11Q6UB99 2663 aaPredicted RBP8.99□□□□□ -0.97
VTI1A-205ENST00000483122 PTPRQQ9UMZ3 2332 aa8.99□□□□□ -0.97
VTI1A-205ENST00000483122 IGHV3OR16-13A0A075B7E8 117 aa8.99□□□□□ -0.97
VTI1A-205ENST00000483122 IGHV3-74A0A0B4J1X5 117 aa8.99□□□□□ -0.97
VTI1A-205ENST00000483122 CENPVL3A0A0U1RRI6 287 aa8.99□□□□□ -0.97
VTI1A-205ENST00000483122 RBAKDNA6NC62 111 aa8.99□□□□□ -0.97
VTI1A-205ENST00000483122 TSHBP01222 138 aa8.99□□□□□ -0.97
VTI1A-205ENST00000483122 TEX49A0A1B0GTD5 131 aa8.98□□□□□ -0.97
VTI1A-205ENST00000483122 M0R381 172 aa8.98□□□□□ -0.97
VTI1A-205ENST00000483122 IGHV3-33P01772 117 aa8.98□□□□□ -0.97
VTI1A-205ENST00000483122 Q6Q795 121 aa8.98□□□□□ -0.97
VTI1A-205ENST00000483122 C1orf122Q6ZSJ8 110 aa8.98□□□□□ -0.97
VTI1A-205ENST00000483122 A4D1N5 150 aa8.97□□□□□ -0.97
VTI1A-205ENST00000483122 M0QXV9 152 aa8.97□□□□□ -0.97
VTI1A-205ENST00000483122 PRR9Q5T870 116 aa8.97□□□□□ -0.97
VTI1A-205ENST00000483122 C14orf178Q8N769 122 aaPredicted RBP8.97□□□□□ -0.97
VTI1A-205ENST00000483122 TIMD4Q96H15 378 aa8.97□□□□□ -0.97
VTI1A-205ENST00000483122 TRAV8-4A0A0B4J246 113 aa8.97□□□□□ -0.97
VTI1A-205ENST00000483122 HERVK_113P61574 105 aa8.97□□□□□ -0.97
VTI1A-205ENST00000483122 BSPH1Q075Z2 132 aa8.97□□□□□ -0.97
VTI1A-205ENST00000483122 AMELXQ99217 191 aa8.97□□□□□ -0.97
VTI1A-205ENST00000483122 J3KRW8 73 aa8.96□□□□□ -0.97
VTI1A-205ENST00000483122 MGPP08493 103 aa8.96□□□□□ -0.97
VTI1A-205ENST00000483122 MEIG1Q5JSS6 88 aa8.96□□□□□ -0.97
VTI1A-205ENST00000483122 C3orf56Q8N813 242 aa8.96□□□□□ -0.97
VTI1A-205ENST00000483122 TMEM263Q8WUH6 116 aaKnown RBP8.96□□□□□ -0.97
VTI1A-205ENST00000483122 TACC2O95359 2948 aa8.96□□□□□ -0.97
VTI1A-205ENST00000483122 LAMA5O15230 3695 aa8.96□□□□□ -0.98
VTI1A-205ENST00000483122 LYNX1G3V0Z9 82 aa8.96□□□□□ -0.98
VTI1A-205ENST00000483122 IGHV4-39P01824 125 aa8.96□□□□□ -0.98
VTI1A-205ENST00000483122 IGF1P05019 195 aa8.96□□□□□ -0.98
VTI1A-205ENST00000483122 LYNX1P0DP58 116 aa8.96□□□□□ -0.98
VTI1A-205ENST00000483122 HES1Q14469 280 aa8.96□□□□□ -0.98
VTI1A-205ENST00000483122 HIF1ANQ9NWT6 349 aa8.96□□□□□ -0.98
VTI1A-205ENST00000483122 TNFRSF18Q9Y5U5 241 aa8.96□□□□□ -0.98
VTI1A-205ENST00000483122 BOD1L1Q8NFC6 3051 aa8.96□□□□□ -0.98
VTI1A-205ENST00000483122 IGHV3-49A0A0A0MS15 119 aa8.95□□□□□ -0.98
VTI1A-205ENST00000483122 BUB3O43684 328 aa8.95□□□□□ -0.98
VTI1A-205ENST00000483122 LINC01620Q4KN68 170 aa8.95□□□□□ -0.98
VTI1A-205ENST00000483122 TMEM170BQ5T4T1 132 aa8.95□□□□□ -0.98
VTI1A-205ENST00000483122 NPBQ8NG41 125 aa8.95□□□□□ -0.98
VTI1A-205ENST00000483122 RNASE6Q93091 150 aaKnown RBP8.95□□□□□ -0.98
VTI1A-205ENST00000483122 TP53TG1Q9Y2A0 90 aa8.95□□□□□ -0.98
VTI1A-205ENST00000483122 RP1L1Q8IWN7 2480 aaPredicted RBP8.94□□□□□ -0.98
VTI1A-205ENST00000483122 ZNRF2Q8NHG8 242 aa8.94□□□□□ -0.98
VTI1A-205ENST00000483122 FAM57AQ8TBR7 257 aa8.94□□□□□ -0.98
VTI1A-205ENST00000483122 DPH3P1Q9H4G8 78 aa8.94□□□□□ -0.98
VTI1A-205ENST00000483122 BEX4Q9NWD9 120 aaPredicted RBP8.94□□□□□ -0.98
VTI1A-205ENST00000483122 ACACBO00763 2458 aa8.94□□□□□ -0.98
VTI1A-205ENST00000483122 ARHGAP32A7KAX9 2087 aa8.94□□□□□ -0.98
VTI1A-205ENST00000483122 P0DMU3 169 aa8.94□□□□□ -0.98
VTI1A-205ENST00000483122 FAM231AP0DMU4 169 aa8.94□□□□□ -0.98
VTI1A-205ENST00000483122 FAM231CP0DMU5 169 aa8.94□□□□□ -0.98
VTI1A-205ENST00000483122 ARL3P36405 182 aa8.94□□□□□ -0.98
VTI1A-205ENST00000483122 RPL39P62891 51 aaKnown RBP8.94□□□□□ -0.98
VTI1A-205ENST00000483122 ZFAND3Q9H8U3 227 aa8.94□□□□□ -0.98
VTI1A-205ENST00000483122 DYNLRB1Q9NP97 96 aa8.94□□□□□ -0.98
VTI1A-205ENST00000483122 POLEQ07864 2286 aa8.94□□□□□ -0.98
VTI1A-205ENST00000483122 TPRP12270 2363 aaKnown RBP8.94□□□□□ -0.98
VTI1A-205ENST00000483122 J3QQQ9 107 aa8.93□□□□□ -0.98
VTI1A-205ENST00000483122 PMVKQ15126 192 aa8.93□□□□□ -0.98
VTI1A-205ENST00000483122 GPHB5Q86YW7 130 aa8.93□□□□□ -0.98
VTI1A-205ENST00000483122 MDFICQ9P1T7 246 aa8.93□□□□□ -0.98
VTI1A-205ENST00000483122 MAP1BP46821 2468 aaKnown RBP8.93□□□□□ -0.98
VTI1A-205ENST00000483122 TRAV2A0A0B4J234 112 aa8.93□□□□□ -0.98
VTI1A-205ENST00000483122 IGIPA6NJ69 53 aa8.93□□□□□ -0.98
VTI1A-205ENST00000483122 RPL13AP40429 203 aaKnown RBP8.93□□□□□ -0.98
VTI1A-205ENST00000483122 ATXN8Q156A1 80 aa8.93□□□□□ -0.98
VTI1A-205ENST00000483122 PRR30Q53SZ7 412 aaPredicted RBP8.93□□□□□ -0.98
VTI1A-205ENST00000483122 MUSTN1Q8IVN3 82 aa8.93□□□□□ -0.98
VTI1A-205ENST00000483122 OR10J6PQ8NGY7 276 aa8.93□□□□□ -0.98
VTI1A-205ENST00000483122 WNK2Q9Y3S1 2297 aa8.93□□□□□ -0.98
VTI1A-205ENST00000483122 CLPSL1A2RUU4 121 aa8.92□□□□□ -0.98
VTI1A-205ENST00000483122 H3BMM0 161 aa8.92□□□□□ -0.98
VTI1A-205ENST00000483122 Q1RN00 199 aa8.92□□□□□ -0.98
VTI1A-205ENST00000483122 PAPPA-AS1Q5QFB9 102 aa8.92□□□□□ -0.98
VTI1A-205ENST00000483122 C9orf47Q6ZRZ4 202 aa8.92□□□□□ -0.98
VTI1A-205ENST00000483122 UBE2WQ96B02 151 aa8.92□□□□□ -0.98
VTI1A-205ENST00000483122 CHCHD5Q9BSY4 110 aa8.92□□□□□ -0.98
VTI1A-205ENST00000483122 MGAQ8IWI9 3026 aa8.92□□□□□ -0.98
VTI1A-205ENST00000483122 LGALS9O00182 355 aa8.92□□□□□ -0.98
VTI1A-205ENST00000483122 SCGB2A1O75556 95 aa8.92□□□□□ -0.98
VTI1A-205ENST00000483122 LGALS3P17931 250 aaKnown RBP8.92□□□□□ -0.98
VTI1A-205ENST00000483122 DPM3Q9P2X0 92 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms