RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 LRCOL1A6NCL2 159 aa4.96□□□□□ -1.62
CSDE1-206ENST00000483030 M0R143 59 aa4.96□□□□□ -1.62
CSDE1-206ENST00000483030 PSCAO43653 123 aa4.96□□□□□ -1.62
CSDE1-206ENST00000483030 PAGE4O60829 102 aa4.96□□□□□ -1.62
CSDE1-206ENST00000483030 ZNF253O75346 499 aa4.96□□□□□ -1.62
CSDE1-206ENST00000483030 NDUFB4O95168 129 aa4.96□□□□□ -1.62
CSDE1-206ENST00000483030 IFNA7P01567 189 aa4.96□□□□□ -1.62
CSDE1-206ENST00000483030 OR10J4P0C629 311 aa4.96□□□□□ -1.62
CSDE1-206ENST00000483030 SFTA3P0C7M3 94 aa4.96□□□□□ -1.62
CSDE1-206ENST00000483030 PET100P0DJ07 73 aa4.96□□□□□ -1.62
CSDE1-206ENST00000483030 HIST1H1EP10412 219 aaKnown RBP4.96□□□□□ -1.62
CSDE1-206ENST00000483030 CRISP2P16562 243 aa4.96□□□□□ -1.62
CSDE1-206ENST00000483030 TMBIM6P55061 237 aa4.96□□□□□ -1.62
CSDE1-206ENST00000483030 ZNF415Q09FC8 603 aa4.96□□□□□ -1.62
CSDE1-206ENST00000483030 Q5BKY6 102 aa4.96□□□□□ -1.62
CSDE1-206ENST00000483030 PRR9Q5T870 116 aa4.96□□□□□ -1.62
CSDE1-206ENST00000483030 EXOC3-AS1Q8N2X6 119 aa4.96□□□□□ -1.62
CSDE1-206ENST00000483030 ZFAND2AQ8N6M9 145 aa4.96□□□□□ -1.62
CSDE1-206ENST00000483030 OR1L4Q8NGR5 311 aa4.96□□□□□ -1.62
CSDE1-206ENST00000483030 OCC1Q8TAD7 63 aa4.96□□□□□ -1.62
CSDE1-206ENST00000483030 BLNKQ8WV28 456 aa4.96□□□□□ -1.62
CSDE1-206ENST00000483030 MRPL53Q96EL3 112 aaKnown RBP4.96□□□□□ -1.62
CSDE1-206ENST00000483030 RCL1Q9Y2P8 373 aaKnown RBP4.96□□□□□ -1.62
CSDE1-206ENST00000483030 TIMM9Q9Y5J7 89 aa4.96□□□□□ -1.62
CSDE1-206ENST00000483030 VPS13BQ7Z7G8 4022 aa4.96□□□□□ -1.62
CSDE1-206ENST00000483030 IGKV2-40A0A087WW87 121 aaPredicted RBP4.95□□□□□ -1.62
CSDE1-206ENST00000483030 CST7O76096 145 aa4.95□□□□□ -1.62
CSDE1-206ENST00000483030 NDUFB6O95139 128 aa4.95□□□□□ -1.62
CSDE1-206ENST00000483030 IGKV2D-40P01614 121 aaPredicted RBP4.95□□□□□ -1.62
CSDE1-206ENST00000483030 MBPP02686 304 aaPredicted RBP4.95□□□□□ -1.62
CSDE1-206ENST00000483030 NMBP08949 121 aa4.95□□□□□ -1.62
CSDE1-206ENST00000483030 RAB5CP51148 216 aa4.95□□□□□ -1.62
CSDE1-206ENST00000483030 GCSAMLQ5JQS6 135 aa4.95□□□□□ -1.62
CSDE1-206ENST00000483030 ATRAIDQ6UW56 229 aa4.95□□□□□ -1.62
CSDE1-206ENST00000483030 C9orf47Q6ZRZ4 202 aa4.95□□□□□ -1.62
CSDE1-206ENST00000483030 C10orf126Q8N4M7 172 aa4.95□□□□□ -1.62
CSDE1-206ENST00000483030 NTN5Q8WTR8 489 aaPredicted RBP4.95□□□□□ -1.62
CSDE1-206ENST00000483030 PCNPQ8WW12 178 aaKnown RBP4.95□□□□□ -1.62
CSDE1-206ENST00000483030 SLC39A9Q9NUM3 307 aa4.95□□□□□ -1.62
CSDE1-206ENST00000483030 V9GYH0 126 aa4.95□□□□□ -1.62
CSDE1-206ENST00000483030 KRTAP29-1A8MX34 341 aaPredicted RBP4.94□□□□□ -1.62
CSDE1-206ENST00000483030 H3BMQ9 156 aa4.94□□□□□ -1.62
CSDE1-206ENST00000483030 TSPAN13O95857 204 aa4.94□□□□□ -1.62
CSDE1-206ENST00000483030 ORM1P02763 201 aa4.94□□□□□ -1.62
CSDE1-206ENST00000483030 PLA2G1BP04054 148 aaKnown RBP4.94□□□□□ -1.62
CSDE1-206ENST00000483030 PYYP10082 97 aa4.94□□□□□ -1.62
CSDE1-206ENST00000483030 RPL29P47914 159 aaKnown RBP4.94□□□□□ -1.62
CSDE1-206ENST00000483030 CAV2P51636 162 aa4.94□□□□□ -1.62
CSDE1-206ENST00000483030 DEFA1P59665 94 aa4.94□□□□□ -1.62
CSDE1-206ENST00000483030 DEFA3P59666 94 aa4.94□□□□□ -1.62
CSDE1-206ENST00000483030 SEC61GP60059 68 aa4.94□□□□□ -1.62
CSDE1-206ENST00000483030 MUC21Q5SSG8 566 aa4.94□□□□□ -1.62
CSDE1-206ENST00000483030 TMEM78Q5T7P6 136 aa4.94□□□□□ -1.62
CSDE1-206ENST00000483030 RNASEKQ6P5S7 137 aaKnown RBP4.94□□□□□ -1.62
CSDE1-206ENST00000483030 PTH2Q96A98 100 aa4.94□□□□□ -1.62
CSDE1-206ENST00000483030 TXNDC17Q9BRA2 123 aa4.94□□□□□ -1.62
CSDE1-206ENST00000483030 C20orf85Q9H1P6 137 aa4.94□□□□□ -1.62
CSDE1-206ENST00000483030 AAMDCQ9H7C9 122 aa4.94□□□□□ -1.62
CSDE1-206ENST00000483030 UQCC1Q9NVA1 299 aa4.94□□□□□ -1.62
CSDE1-206ENST00000483030 TMEM14CQ9P0S9 112 aa4.94□□□□□ -1.62
CSDE1-206ENST00000483030 ZNF492Q9P255 531 aa4.94□□□□□ -1.62
CSDE1-206ENST00000483030 WDR83OSQ9Y284 106 aa4.94□□□□□ -1.62
CSDE1-206ENST00000483030 HSPB11Q9Y547 144 aa4.94□□□□□ -1.62
CSDE1-206ENST00000483030 IGHV3-38A0A0C4DH36 116 aa4.93□□□□□ -1.62
CSDE1-206ENST00000483030 LOC100131303A0A0U1RQF7 123 aa4.93□□□□□ -1.62
CSDE1-206ENST00000483030 C20orf202A1L168 122 aa4.93□□□□□ -1.62
CSDE1-206ENST00000483030 FAM24AA6NFZ4 105 aa4.93□□□□□ -1.62
CSDE1-206ENST00000483030 C1orf196B1AJZ1 125 aa4.93□□□□□ -1.62
CSDE1-206ENST00000483030 IBA57-AS1B1ANH7 110 aa4.93□□□□□ -1.62
CSDE1-206ENST00000483030 K7ERU9 68 aa4.93□□□□□ -1.62
CSDE1-206ENST00000483030 PVALBP20472 110 aaPredicted RBP4.93□□□□□ -1.62
CSDE1-206ENST00000483030 PDE6HQ13956 83 aa4.93□□□□□ -1.62
CSDE1-206ENST00000483030 TEX261Q6UWH6 196 aa4.93□□□□□ -1.62
CSDE1-206ENST00000483030 Q8N814 137 aa4.93□□□□□ -1.62
CSDE1-206ENST00000483030 OR10G4Q8NGN3 311 aa4.93□□□□□ -1.62
CSDE1-206ENST00000483030 Q8TAT8 98 aa4.93□□□□□ -1.62
CSDE1-206ENST00000483030 RASL10AQ92737 203 aa4.93□□□□□ -1.62
CSDE1-206ENST00000483030 Q9HAA7 133 aa4.93□□□□□ -1.62
CSDE1-206ENST00000483030 LSM5Q9Y4Y9 91 aaKnown RBP4.93□□□□□ -1.62
CSDE1-206ENST00000483030 UBE2L5PA0A1B0GUS4 154 aa4.92□□□□□ -1.62
CSDE1-206ENST00000483030 NAP1L6A6NFF2 107 aa4.92□□□□□ -1.62
CSDE1-206ENST00000483030 C9JCJ5 164 aa4.92□□□□□ -1.62
CSDE1-206ENST00000483030 M0QXV9 152 aa4.92□□□□□ -1.62
CSDE1-206ENST00000483030 UPK1BO75841 260 aa4.92□□□□□ -1.62
CSDE1-206ENST00000483030 INPP1P49441 399 aa4.92□□□□□ -1.62
CSDE1-206ENST00000483030 CAMPP49913 170 aa4.92□□□□□ -1.62
CSDE1-206ENST00000483030 ZNF138P52744 262 aa4.92□□□□□ -1.62
CSDE1-206ENST00000483030 PTTG1IPP53801 180 aa4.92□□□□□ -1.62
CSDE1-206ENST00000483030 SNRPEP62304 92 aaKnown RBP4.92□□□□□ -1.62
CSDE1-206ENST00000483030 BAXQ07812 192 aa4.92□□□□□ -1.62
CSDE1-206ENST00000483030 TMEM183BQ1AE95 376 aa4.92□□□□□ -1.62
CSDE1-206ENST00000483030 RNF151Q2KHN1 245 aa4.92□□□□□ -1.62
CSDE1-206ENST00000483030 VWC2Q2TAL6 325 aa4.92□□□□□ -1.62
CSDE1-206ENST00000483030 SERTAD4-AS1Q5TG53 156 aa4.92□□□□□ -1.62
CSDE1-206ENST00000483030 ERASQ7Z444 233 aa4.92□□□□□ -1.62
CSDE1-206ENST00000483030 TMEM183AQ8IXX5 376 aa4.92□□□□□ -1.62
CSDE1-206ENST00000483030 DEFB104AQ8WTQ1 72 aa4.92□□□□□ -1.62
CSDE1-206ENST00000483030 HYLS1Q96M11 299 aa4.92□□□□□ -1.62
CSDE1-206ENST00000483030 SLC25A31Q9H0C2 315 aa4.92□□□□□ -1.62
CSDE1-206ENST00000483030 ZFP30Q9Y2G7 519 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms