RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 FAM3BP58499 235 aaPredicted RBP11.58□□□□□ -0.56
HMGN1-214ENST00000482733 VSIG2Q96IQ7 327 aa11.58□□□□□ -0.56
HMGN1-214ENST00000482733 ZNF479Q96JC4 524 aa11.58□□□□□ -0.56
HMGN1-214ENST00000482733 KMT2AQ03164 3969 aa11.57□□□□□ -0.56
HMGN1-214ENST00000482733 TMEM250H0YL14 139 aa11.57□□□□□ -0.56
HMGN1-214ENST00000482733 PAX4O43316 350 aa11.57□□□□□ -0.56
HMGN1-214ENST00000482733 CRYBA4P53673 196 aa11.57□□□□□ -0.56
HMGN1-214ENST00000482733 CCL18P55774 89 aa11.57□□□□□ -0.56
HMGN1-214ENST00000482733 ZNF506Q5JVG8 444 aa11.57□□□□□ -0.56
HMGN1-214ENST00000482733 PRR27Q6MZM9 219 aa11.57□□□□□ -0.56
HMGN1-214ENST00000482733 TEX261Q6UWH6 196 aa11.57□□□□□ -0.56
HMGN1-214ENST00000482733 BIN3Q9NQY0 253 aa11.57□□□□□ -0.56
HMGN1-214ENST00000482733 RAB19A4D1S5 217 aa11.56□□□□□ -0.56
HMGN1-214ENST00000482733 GRIFINA4D1Z8 144 aa11.56□□□□□ -0.56
HMGN1-214ENST00000482733 PGPEP1LA6NFU8 196 aa11.56□□□□□ -0.56
HMGN1-214ENST00000482733 H3BVH4 76 aa11.56□□□□□ -0.56
HMGN1-214ENST00000482733 RS1O15537 224 aa11.56□□□□□ -0.56
HMGN1-214ENST00000482733 NDUFS6O75380 124 aaKnown RBP11.56□□□□□ -0.56
HMGN1-214ENST00000482733 CXCL1P09341 107 aa11.56□□□□□ -0.56
HMGN1-214ENST00000482733 SFTA3P0C7M3 94 aa11.56□□□□□ -0.56
HMGN1-214ENST00000482733 ARMS2P0C7Q2 107 aa11.56□□□□□ -0.56
HMGN1-214ENST00000482733 SYT8Q8NBV8 401 aa11.56□□□□□ -0.56
HMGN1-214ENST00000482733 TMSB15BA0A087X1C1 80 aa11.55□□□□□ -0.56
HMGN1-214ENST00000482733 MED14OSP0DP75 135 aa11.55□□□□□ -0.56
HMGN1-214ENST00000482733 MGST1P10620 155 aaKnown RBP11.55□□□□□ -0.56
HMGN1-214ENST00000482733 DAZAP1Q96EP5 407 aaKnown RBP11.55□□□□□ -0.56
HMGN1-214ENST00000482733 A8MWV9 139 aa11.54□□□□□ -0.56
HMGN1-214ENST00000482733 IGLV2-8P01709 118 aa11.54□□□□□ -0.56
HMGN1-214ENST00000482733 TOR2AQ5JU69 321 aa11.54□□□□□ -0.56
HMGN1-214ENST00000482733 CFAP126Q5VTH2 177 aa11.54□□□□□ -0.56
HMGN1-214ENST00000482733 ZNF575Q86XF7 245 aa11.54□□□□□ -0.56
HMGN1-214ENST00000482733 FAM210AQ96ND0 272 aa11.54□□□□□ -0.56
HMGN1-214ENST00000482733 EIF5A2Q9GZV4 153 aaKnown RBP11.54□□□□□ -0.56
HMGN1-214ENST00000482733 SCRT2Q9NQ03 307 aa11.54□□□□□ -0.56
HMGN1-214ENST00000482733 PHLDA3Q9Y5J5 127 aa11.54□□□□□ -0.56
HMGN1-214ENST00000482733 ICOSQ9Y6W8 199 aa11.54□□□□□ -0.56
HMGN1-214ENST00000482733 A0A096LPF7 62 aa11.53□□□□□ -0.56
HMGN1-214ENST00000482733 MRPL23Q16540 153 aaKnown RBP11.53□□□□□ -0.56
HMGN1-214ENST00000482733 PCNPQ8WW12 178 aaKnown RBP11.53□□□□□ -0.56
HMGN1-214ENST00000482733 MUC4Q99102 2169 aa11.52□□□□□ -0.56
HMGN1-214ENST00000482733 TRBV20OR9-2A0A075B6H5 130 aa11.52□□□□□ -0.57
HMGN1-214ENST00000482733 GATA1P15976 413 aaPredicted RBP11.52□□□□□ -0.57
HMGN1-214ENST00000482733 RPS20P60866 119 aaKnown RBP11.52□□□□□ -0.57
HMGN1-214ENST00000482733 ZFP2Q6ZN57 461 aa11.52□□□□□ -0.57
HMGN1-214ENST00000482733 ZFP82Q8N141 532 aa11.52□□□□□ -0.57
HMGN1-214ENST00000482733 PARLQ9H300 379 aa11.52□□□□□ -0.57
HMGN1-214ENST00000482733 RPL19P84098 196 aaKnown RBP11.51□□□□□ -0.57
HMGN1-214ENST00000482733 DMRTA1Q5VZB9 504 aa11.51□□□□□ -0.57
HMGN1-214ENST00000482733 LINC00588Q9Y4M8 146 aa11.51□□□□□ -0.57
HMGN1-214ENST00000482733 XKRY2A2RUG3 117 aa11.5□□□□□ -0.57
HMGN1-214ENST00000482733 C19orf71A6NCJ1 209 aa11.5□□□□□ -0.57
HMGN1-214ENST00000482733 P01737 135 aa11.5□□□□□ -0.57
HMGN1-214ENST00000482733 SSBP4Q9BWG4 385 aaPredicted RBP11.5□□□□□ -0.57
HMGN1-214ENST00000482733 TRBV6-4A0A1B0GX49 114 aa11.49□□□□□ -0.57
HMGN1-214ENST00000482733 K7EQD1 137 aa11.49□□□□□ -0.57
HMGN1-214ENST00000482733 M0R381 172 aa11.49□□□□□ -0.57
HMGN1-214ENST00000482733 RHODO00212 210 aa11.49□□□□□ -0.57
HMGN1-214ENST00000482733 SNAI2O43623 268 aa11.49□□□□□ -0.57
HMGN1-214ENST00000482733 OR5AL1P0C617 328 aa11.49□□□□□ -0.57
HMGN1-214ENST00000482733 GYPEP15421 78 aa11.49□□□□□ -0.57
HMGN1-214ENST00000482733 SRIP30626 198 aa11.49□□□□□ -0.57
HMGN1-214ENST00000482733 RHOHQ15669 191 aa11.49□□□□□ -0.57
HMGN1-214ENST00000482733 ESRGQ1W209 222 aa11.49□□□□□ -0.57
HMGN1-214ENST00000482733 NEGR1Q7Z3B1 354 aa11.49□□□□□ -0.57
HMGN1-214ENST00000482733 SH2D6Q7Z4S9 175 aa11.49□□□□□ -0.57
HMGN1-214ENST00000482733 OR2D3Q8NGH3 330 aa11.49□□□□□ -0.57
HMGN1-214ENST00000482733 PRADC1Q9BSG0 188 aa11.49□□□□□ -0.57
HMGN1-214ENST00000482733 DNAH10Q8IVF4 4471 aa11.49□□□□□ -0.57
HMGN1-214ENST00000482733 IGHV3-73A0A0B4J1V6 119 aa11.48□□□□□ -0.57
HMGN1-214ENST00000482733 CEBPGP53567 150 aa11.48□□□□□ -0.57
HMGN1-214ENST00000482733 SLC25A29Q8N8R3 303 aa11.48□□□□□ -0.57
HMGN1-214ENST00000482733 ZNRF2Q8NHG8 242 aa11.48□□□□□ -0.57
HMGN1-214ENST00000482733 OCC1Q8TAD7 63 aa11.48□□□□□ -0.57
HMGN1-214ENST00000482733 SFRP2Q96HF1 295 aa11.48□□□□□ -0.57
HMGN1-214ENST00000482733 UPK3BQ9BT76 320 aa11.48□□□□□ -0.57
HMGN1-214ENST00000482733 MRPS16Q9Y3D3 137 aaKnown RBP11.48□□□□□ -0.57
HMGN1-214ENST00000482733 LY96Q9Y6Y9 160 aa11.48□□□□□ -0.57
HMGN1-214ENST00000482733 NXPH4O95158 308 aa11.47□□□□□ -0.57
HMGN1-214ENST00000482733 SRP19P09132 144 aaKnown RBP11.47□□□□□ -0.57
HMGN1-214ENST00000482733 SMDT1Q9H4I9 107 aa11.47□□□□□ -0.57
HMGN1-214ENST00000482733 SPANXN1Q5VSR9 72 aa11.46□□□□□ -0.57
HMGN1-214ENST00000482733 UFSP1Q6NVU6 142 aa11.46□□□□□ -0.57
HMGN1-214ENST00000482733 NUDT10Q8NFP7 164 aa11.46□□□□□ -0.57
HMGN1-214ENST00000482733 NUDT11Q96G61 164 aa11.46□□□□□ -0.57
HMGN1-214ENST00000482733 SMIM7Q9BQ49 75 aa11.46□□□□□ -0.57
HMGN1-214ENST00000482733 JPT2Q9H910 190 aa11.46□□□□□ -0.57
HMGN1-214ENST00000482733 DNAH2Q9P225 4427 aa11.45□□□□□ -0.58
HMGN1-214ENST00000482733 IGLV2-18A0A075B6J9 118 aa11.45□□□□□ -0.58
HMGN1-214ENST00000482733 K7EN84 100 aa11.45□□□□□ -0.58
HMGN1-214ENST00000482733 PEA15Q15121 130 aa11.45□□□□□ -0.58
HMGN1-214ENST00000482733 LYPD5Q6UWN5 251 aa11.45□□□□□ -0.58
HMGN1-214ENST00000482733 FER1L6-AS1Q8NA97 138 aa11.45□□□□□ -0.58
HMGN1-214ENST00000482733 OR10AG1Q8NH19 301 aa11.45□□□□□ -0.58
HMGN1-214ENST00000482733 SAMD10Q9BYL1 202 aa11.45□□□□□ -0.58
HMGN1-214ENST00000482733 Q9H8V8 135 aa11.45□□□□□ -0.58
HMGN1-214ENST00000482733 A0A1W2PPQ1 181 aa11.44□□□□□ -0.58
HMGN1-214ENST00000482733 ZNF727A8MUV8 499 aa11.44□□□□□ -0.58
HMGN1-214ENST00000482733 F2Z2F3 143 aa11.44□□□□□ -0.58
HMGN1-214ENST00000482733 M0R2N4 97 aa11.44□□□□□ -0.58
HMGN1-214ENST00000482733 IGLC6P0CF74 106 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms