RNA–Protein interactions for RNA: ENST00000481897.1

RAB3IP-206, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 3,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-206ENST00000481897 PRNTQ86SH4 94 aa1.94□□□□□ -2.1
RAB3IP-206ENST00000481897 C11orf45Q8TAV5 145 aa1.94□□□□□ -2.1
RAB3IP-206ENST00000481897 TSKUQ8WUA8 353 aa1.94□□□□□ -2.1
RAB3IP-206ENST00000481897 DAZAP1Q96EP5 407 aaKnown RBP1.94□□□□□ -2.1
RAB3IP-206ENST00000481897 TIMM21Q9BVV7 248 aa1.94□□□□□ -2.1
RAB3IP-206ENST00000481897 SMIM3Q9BZL3 60 aa1.94□□□□□ -2.1
RAB3IP-206ENST00000481897 MAP1AP78559 2803 aaPredicted RBP1.94□□□□□ -2.1
RAB3IP-206ENST00000481897 MXRA5Q9NR99 2828 aa1.94□□□□□ -2.1
RAB3IP-206ENST00000481897 IGHV4-28A0A0C4DH34 117 aa1.94□□□□□ -2.1
RAB3IP-206ENST00000481897 PAGE4O60829 102 aa1.94□□□□□ -2.1
RAB3IP-206ENST00000481897 IGHV3-53P01767 116 aa1.94□□□□□ -2.1
RAB3IP-206ENST00000481897 MT-ND4LP03901 98 aa1.94□□□□□ -2.1
RAB3IP-206ENST00000481897 GATA1P15976 413 aaPredicted RBP1.94□□□□□ -2.1
RAB3IP-206ENST00000481897 GATA2P23769 480 aaPredicted RBP1.94□□□□□ -2.1
RAB3IP-206ENST00000481897 SUMO1P63165 101 aaKnown RBP1.94□□□□□ -2.1
RAB3IP-206ENST00000481897 RIGQ13278 110 aa1.94□□□□□ -2.1
RAB3IP-206ENST00000481897 TMEM241Q24JQ0 296 aa1.94□□□□□ -2.1
RAB3IP-206ENST00000481897 MORN5Q5VZ52 161 aa1.94□□□□□ -2.1
RAB3IP-206ENST00000481897 KRTAP5-4Q6L8H1 288 aa1.94□□□□□ -2.1
RAB3IP-206ENST00000481897 DAZ4Q86SG3 579 aaKnown RBP1.94□□□□□ -2.1
RAB3IP-206ENST00000481897 BAGE2Q86Y30 109 aa1.94□□□□□ -2.1
RAB3IP-206ENST00000481897 SBSPONQ8IVN8 264 aa1.94□□□□□ -2.1
RAB3IP-206ENST00000481897 FAM24BQ8N5W8 94 aa1.94□□□□□ -2.1
RAB3IP-206ENST00000481897 C11orf44Q8N8P7 122 aa1.94□□□□□ -2.1
RAB3IP-206ENST00000481897 LINC00052Q96N35 136 aa1.94□□□□□ -2.1
RAB3IP-206ENST00000481897 DUX3Q96PT4 197 aa1.94□□□□□ -2.1
RAB3IP-206ENST00000481897 PRADC1Q9BSG0 188 aa1.94□□□□□ -2.1
RAB3IP-206ENST00000481897 DAZ3Q9NR90 486 aaKnown RBP1.94□□□□□ -2.1
RAB3IP-206ENST00000481897 PRO0255Q9UI72 69 aa1.94□□□□□ -2.1
RAB3IP-206ENST00000481897 VPS13CQ709C8 3753 aa1.94□□□□□ -2.1
RAB3IP-206ENST00000481897 TRAV5A0A0B4J249 113 aa1.93□□□□□ -2.1
RAB3IP-206ENST00000481897 SMIM27A0A1W2PRY6 76 aa1.93□□□□□ -2.1
RAB3IP-206ENST00000481897 TMEM218A2RU14 115 aa1.93□□□□□ -2.1
RAB3IP-206ENST00000481897 LINC01546A6NGU7 62 aa1.93□□□□□ -2.1
RAB3IP-206ENST00000481897 IGLV2-8P01709 118 aa1.93□□□□□ -2.1
RAB3IP-206ENST00000481897 P01737 135 aa1.93□□□□□ -2.1
RAB3IP-206ENST00000481897 TYMSP04818 313 aa1.93□□□□□ -2.1
RAB3IP-206ENST00000481897 ZNF25P17030 456 aaPredicted RBP1.93□□□□□ -2.1
RAB3IP-206ENST00000481897 RPL35P42766 123 aaKnown RBP1.93□□□□□ -2.1
RAB3IP-206ENST00000481897 DAD1P61803 113 aa1.93□□□□□ -2.1
RAB3IP-206ENST00000481897 RANP62826 216 aaKnown RBP1.93□□□□□ -2.1
RAB3IP-206ENST00000481897 MRPL23Q16540 153 aaKnown RBP1.93□□□□□ -2.1
RAB3IP-206ENST00000481897 PCNPQ8WW12 178 aaKnown RBP1.93□□□□□ -2.1
RAB3IP-206ENST00000481897 ISOC2Q96AB3 205 aa1.93□□□□□ -2.1
RAB3IP-206ENST00000481897 RMI2Q96E14 147 aa1.93□□□□□ -2.1
RAB3IP-206ENST00000481897 TVP23CQ96ET8 276 aa1.93□□□□□ -2.1
RAB3IP-206ENST00000481897 ZNF469Q96JG9 3925 aaPredicted RBP1.93□□□□□ -2.1
RAB3IP-206ENST00000481897 LINC01587Q99440 93 aa1.93□□□□□ -2.1
RAB3IP-206ENST00000481897 C20orf78Q9BR46 151 aa1.93□□□□□ -2.1
RAB3IP-206ENST00000481897 TMEM191AQ9H0A3 160 aa1.93□□□□□ -2.1
RAB3IP-206ENST00000481897 PARLQ9H300 379 aa1.93□□□□□ -2.1
RAB3IP-206ENST00000481897 DPH3P1Q9H4G8 78 aa1.93□□□□□ -2.1
RAB3IP-206ENST00000481897 NAT8BQ9UHF3 227 aa1.93□□□□□ -2.1
RAB3IP-206ENST00000481897 ICOSQ9Y6W8 199 aa1.93□□□□□ -2.1
RAB3IP-206ENST00000481897 S4R3C0 116 aa1.93□□□□□ -2.1
RAB3IP-206ENST00000481897 ACANP16112 2415 aa1.93□□□□□ -2.1
RAB3IP-206ENST00000481897 TRAV9-2A0A087WT02 112 aa1.93□□□□□ -2.1
RAB3IP-206ENST00000481897 TMEM238LA0A1B0GVL6 79 aa1.93□□□□□ -2.1
RAB3IP-206ENST00000481897 ZNF207O43670 478 aaKnown RBP1.93□□□□□ -2.1
RAB3IP-206ENST00000481897 GATCO43716 136 aaKnown RBP1.93□□□□□ -2.1
RAB3IP-206ENST00000481897 SH2D1AO60880 128 aa1.93□□□□□ -2.1
RAB3IP-206ENST00000481897 S100A1P23297 94 aa1.93□□□□□ -2.1
RAB3IP-206ENST00000481897 GCSHP23434 173 aa1.93□□□□□ -2.1
RAB3IP-206ENST00000481897 DEFA5Q01523 94 aa1.93□□□□□ -2.1
RAB3IP-206ENST00000481897 CENPWQ5EE01 88 aa1.93□□□□□ -2.1
RAB3IP-206ENST00000481897 GCSAMLQ5JQS6 135 aa1.93□□□□□ -2.1
RAB3IP-206ENST00000481897 KCNIP4Q6PIL6 250 aa1.93□□□□□ -2.1
RAB3IP-206ENST00000481897 LINC00479Q96M42 142 aa1.93□□□□□ -2.1
RAB3IP-206ENST00000481897 TMEM208Q9BTX3 173 aa1.93□□□□□ -2.1
RAB3IP-206ENST00000481897 GNG13Q9P2W3 67 aa1.93□□□□□ -2.1
RAB3IP-206ENST00000481897 CSDC2Q9Y534 153 aaKnown RBP1.93□□□□□ -2.1
RAB3IP-206ENST00000481897 SETD2Q9BYW2 2564 aaPredicted RBP1.93□□□□□ -2.1
RAB3IP-206ENST00000481897 LCE6AA0A183 80 aa1.93□□□□□ -2.1
RAB3IP-206ENST00000481897 KNCNA6PVL3 124 aa1.93□□□□□ -2.1
RAB3IP-206ENST00000481897 ATP6V1G1O75348 118 aa1.93□□□□□ -2.1
RAB3IP-206ENST00000481897 SOHLH1Q5JUK2 328 aa1.93□□□□□ -2.1
RAB3IP-206ENST00000481897 CST9LP1Q5W188 147 aa1.93□□□□□ -2.1
RAB3IP-206ENST00000481897 CDPF1Q6NVV7 123 aa1.93□□□□□ -2.1
RAB3IP-206ENST00000481897 LINC01551Q86U37 167 aa1.93□□□□□ -2.1
RAB3IP-206ENST00000481897 EXOC3-AS1Q8N2X6 119 aa1.93□□□□□ -2.1
RAB3IP-206ENST00000481897 FER1L6-AS1Q8NA97 138 aa1.93□□□□□ -2.1
RAB3IP-206ENST00000481897 BLNKQ8WV28 456 aa1.93□□□□□ -2.1
RAB3IP-206ENST00000481897 SMIM7Q9BQ49 75 aa1.93□□□□□ -2.1
RAB3IP-206ENST00000481897 APLNQ9ULZ1 77 aa1.93□□□□□ -2.1
RAB3IP-206ENST00000481897 CSMD2Q7Z408 3487 aa1.92□□□□□ -2.1
RAB3IP-206ENST00000481897 DNAH1Q9P2D7 4330 aa1.92□□□□□ -2.1
RAB3IP-206ENST00000481897 IGKV2-40A0A087WW87 121 aaPredicted RBP1.92□□□□□ -2.1
RAB3IP-206ENST00000481897 PRAC2D3DTV9 90 aa1.92□□□□□ -2.1
RAB3IP-206ENST00000481897 SNAPINO95295 136 aa1.92□□□□□ -2.1
RAB3IP-206ENST00000481897 IGKV2D-40P01614 121 aaPredicted RBP1.92□□□□□ -2.1
RAB3IP-206ENST00000481897 IGHV3-48P01763 117 aa1.92□□□□□ -2.1
RAB3IP-206ENST00000481897 RBMY1A1P0DJD3 496 aaKnown RBP1.92□□□□□ -2.1
RAB3IP-206ENST00000481897 RBMY1CP0DJD4 496 aa1.92□□□□□ -2.1
RAB3IP-206ENST00000481897 RAB4AP20338 218 aa1.92□□□□□ -2.1
RAB3IP-206ENST00000481897 RBMY1FQ15415 496 aaKnown RBP1.92□□□□□ -2.1
RAB3IP-206ENST00000481897 LELP1Q5T871 98 aa1.92□□□□□ -2.1
RAB3IP-206ENST00000481897 ATRAIDQ6UW56 229 aa1.92□□□□□ -2.1
RAB3IP-206ENST00000481897 COMMD7Q86VX2 200 aa1.92□□□□□ -2.1
RAB3IP-206ENST00000481897 SVBPQ8N300 66 aa1.92□□□□□ -2.1
RAB3IP-206ENST00000481897 NTN5Q8WTR8 489 aaPredicted RBP1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms