RNA–Protein interactions for RNA: ENST00000481173.1

CCNL1-223, Transcript of cyclin L1, human

TSL 2

Gene CCNL1, Length 571 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-223	ENST00000481173	PIRT	P0C851	137 aa		0.4	□□□□□ -2.35
CCNL1-223	ENST00000481173	LINC00694	P0DN24	101 aa		0.4	□□□□□ -2.35
CCNL1-223	ENST00000481173	SLC25A6	P12236	298 aa		0.4	□□□□□ -2.35
CCNL1-223	ENST00000481173	CBLN1	P23435	193 aa		0.4	□□□□□ -2.35
CCNL1-223	ENST00000481173	ZNF137P	P52743	207 aa		0.4	□□□□□ -2.35
CCNL1-223	ENST00000481173	EMX2	Q04743	252 aa		0.4	□□□□□ -2.35
CCNL1-223	ENST00000481173	FXYD3	Q14802	87 aa		0.4	□□□□□ -2.35
CCNL1-223	ENST00000481173	C6orf52	Q5T4I8	152 aa		0.4	□□□□□ -2.35
CCNL1-223	ENST00000481173	OR2T2	Q6IF00	324 aa		0.4	□□□□□ -2.35
CCNL1-223	ENST00000481173	PLAC4	Q8WY50	150 aa		0.4	□□□□□ -2.35
CCNL1-223	ENST00000481173	SPANXD	Q9BXN6	97 aa		0.4	□□□□□ -2.35
CCNL1-223	ENST00000481173	TMEM242	Q9NWH2	141 aa		0.4	□□□□□ -2.35
CCNL1-223	ENST00000481173	POLE	Q07864	2286 aa		0.4	□□□□□ -2.35
CCNL1-223	ENST00000481173	DENND4C	Q5VZ89	1909 aa		0.4	□□□□□ -2.35
CCNL1-223	ENST00000481173	PLXND1	Q9Y4D7	1925 aa		0.4	□□□□□ -2.35
CCNL1-223	ENST00000481173	MED12L	Q86YW9	2145 aa		0.4	□□□□□ -2.35
CCNL1-223	ENST00000481173	PTPRG	P23470	1445 aa		0.39	□□□□□ -2.35
CCNL1-223	ENST00000481173	PRG4	Q92954	1404 aa	Predicted RBP	0.39	□□□□□ -2.35
CCNL1-223	ENST00000481173	CXorf51A	A0A1B0GTR3	108 aa		0.39	□□□□□ -2.35
CCNL1-223	ENST00000481173	C9orf116	Q5BN46	136 aa	Predicted RBP	0.39	□□□□□ -2.35
CCNL1-223	ENST00000481173	MIC13	Q5XKP0	118 aa		0.39	□□□□□ -2.35
CCNL1-223	ENST00000481173	C12orf73	Q69YU5	71 aa		0.39	□□□□□ -2.35
CCNL1-223	ENST00000481173	SLC48A1	Q6P1K1	146 aa		0.39	□□□□□ -2.35
CCNL1-223	ENST00000481173	SPATA8	Q6RVD6	105 aa		0.39	□□□□□ -2.35
CCNL1-223	ENST00000481173		Q6ZUT4	128 aa		0.39	□□□□□ -2.35
CCNL1-223	ENST00000481173	C5orf56	Q8N8D9	126 aa		0.39	□□□□□ -2.35
CCNL1-223	ENST00000481173	TSKU	Q8WUA8	353 aa		0.39	□□□□□ -2.35
CCNL1-223	ENST00000481173	IFI27L1	Q96BM0	104 aa		0.39	□□□□□ -2.35
CCNL1-223	ENST00000481173	LINC00208	Q96KT6	92 aa		0.39	□□□□□ -2.35
CCNL1-223	ENST00000481173	PDCD10	Q9BUL8	212 aa		0.39	□□□□□ -2.35
CCNL1-223	ENST00000481173	NAA60	Q9H7X0	242 aa		0.39	□□□□□ -2.35
CCNL1-223	ENST00000481173	NDUFA12	Q9UI09	145 aa		0.39	□□□□□ -2.35
CCNL1-223	ENST00000481173	TMEM2	Q9UHN6	1383 aa		0.39	□□□□□ -2.35
CCNL1-223	ENST00000481173	DOCK4	Q8N1I0	1966 aa		0.39	□□□□□ -2.35
CCNL1-223	ENST00000481173	SCN8A	Q9UQD0	1980 aa		0.39	□□□□□ -2.35
CCNL1-223	ENST00000481173	BLM	P54132	1417 aa	Predicted RBP	0.38	□□□□□ -2.35
CCNL1-223	ENST00000481173	MICAL3	Q7RTP6	2002 aa		0.38	□□□□□ -2.35
CCNL1-223	ENST00000481173	HEATR5A	Q86XA9	2040 aa		0.38	□□□□□ -2.35
CCNL1-223	ENST00000481173	ASH1L	Q9NR48	2969 aa	Known RBP	0.38	□□□□□ -2.35
CCNL1-223	ENST00000481173	ERCC6	Q03468	1493 aa		0.38	□□□□□ -2.35
CCNL1-223	ENST00000481173	CDK12	Q9NYV4	1490 aa	Predicted RBP	0.38	□□□□□ -2.35
CCNL1-223	ENST00000481173	TRAV12-3	A0A0B4J271	114 aa		0.38	□□□□□ -2.35
CCNL1-223	ENST00000481173	NBDY	A0A0U1RRE5	68 aa		0.38	□□□□□ -2.35
CCNL1-223	ENST00000481173		K7EIL1	84 aa		0.38	□□□□□ -2.35
CCNL1-223	ENST00000481173		K7EP13	123 aa		0.38	□□□□□ -2.35
CCNL1-223	ENST00000481173	NDUFA2	O43678	99 aa		0.38	□□□□□ -2.35
CCNL1-223	ENST00000481173	APOD	P05090	189 aa		0.38	□□□□□ -2.35
CCNL1-223	ENST00000481173	SPINK7	P58062	85 aa		0.38	□□□□□ -2.35
CCNL1-223	ENST00000481173	RPL13AP3	Q6NVV1	102 aa		0.38	□□□□□ -2.35
CCNL1-223	ENST00000481173	ZNF818P	Q6ZRF7	136 aa		0.38	□□□□□ -2.35
CCNL1-223	ENST00000481173	COX7B2	Q8TF08	81 aa		0.38	□□□□□ -2.35
CCNL1-223	ENST00000481173	PPP3R2	Q96LZ3	170 aa		0.38	□□□□□ -2.35
CCNL1-223	ENST00000481173	AQP10	Q96PS8	301 aa		0.38	□□□□□ -2.35
CCNL1-223	ENST00000481173	PRR15L	Q9BU68	103 aa		0.38	□□□□□ -2.35
CCNL1-223	ENST00000481173	SNRNP25	Q9BV90	132 aa	Known RBP	0.38	□□□□□ -2.35
CCNL1-223	ENST00000481173	SEC11C	Q9BY50	192 aa		0.38	□□□□□ -2.35
CCNL1-223	ENST00000481173	LINC00470	Q9BZP3	86 aa		0.38	□□□□□ -2.35
CCNL1-223	ENST00000481173		V9GYV3	84 aa		0.38	□□□□□ -2.35
CCNL1-223	ENST00000481173	SPAG17	Q6Q759	2223 aa		0.38	□□□□□ -2.35
CCNL1-223	ENST00000481173	DLG5	Q8TDM6	1919 aa		0.38	□□□□□ -2.35
CCNL1-223	ENST00000481173	COL24A1	Q17RW2	1714 aa		0.38	□□□□□ -2.35
CCNL1-223	ENST00000481173	PEAK1	Q9H792	1746 aa		0.38	□□□□□ -2.35
CCNL1-223	ENST00000481173	CCDC88A	Q3V6T2	1871 aa		0.37	□□□□□ -2.35
CCNL1-223	ENST00000481173	UBR2	Q8IWV8	1755 aa		0.37	□□□□□ -2.35
CCNL1-223	ENST00000481173	TRBV10-3	A0A0K0K1G6	114 aa		0.37	□□□□□ -2.35
CCNL1-223	ENST00000481173	APOC4-APOC2	K7ER74	178 aa		0.37	□□□□□ -2.35
CCNL1-223	ENST00000481173		M0R129	80 aa		0.37	□□□□□ -2.35
CCNL1-223	ENST00000481173	IFNG	P01579	166 aa		0.37	□□□□□ -2.35
CCNL1-223	ENST00000481173	FGF7	P21781	194 aa		0.37	□□□□□ -2.35
CCNL1-223	ENST00000481173	ELOF1	P60002	83 aa	Known RBP	0.37	□□□□□ -2.35
CCNL1-223	ENST00000481173	RPL37	P61927	97 aa	Known RBP	0.37	□□□□□ -2.35
CCNL1-223	ENST00000481173	UBE2G1	P62253	170 aa		0.37	□□□□□ -2.35
CCNL1-223	ENST00000481173	CCL8	P80075	99 aa		0.37	□□□□□ -2.35
CCNL1-223	ENST00000481173	C20orf197	Q8N268	126 aa		0.37	□□□□□ -2.35
CCNL1-223	ENST00000481173	DPH3	Q96FX2	82 aa		0.37	□□□□□ -2.35
CCNL1-223	ENST00000481173	SDF2	Q99470	211 aa		0.37	□□□□□ -2.35
CCNL1-223	ENST00000481173	BPESC1	Q9GZL8	116 aa		0.37	□□□□□ -2.35
CCNL1-223	ENST00000481173	MYO5A	Q9Y4I1	1855 aa	Known RBP	0.37	□□□□□ -2.35
CCNL1-223	ENST00000481173	ASCC3	Q8N3C0	2202 aa	Known RBP	0.37	□□□□□ -2.35
CCNL1-223	ENST00000481173	UNC13C	Q8NB66	2214 aa		0.37	□□□□□ -2.35
CCNL1-223	ENST00000481173	MUC5AC	P98088	5654 aa		0.37	□□□□□ -2.35
CCNL1-223	ENST00000481173	ZCCHC6	Q5VYS8	1495 aa	Known RBP	0.36	□□□□□ -2.35
CCNL1-223	ENST00000481173	IBTK	Q9P2D0	1353 aa	Predicted RBP	0.36	□□□□□ -2.35
CCNL1-223	ENST00000481173	MYH10	P35580	1976 aa		0.36	□□□□□ -2.35
CCNL1-223	ENST00000481173	PCDH15	Q96QU1	1955 aa		0.36	□□□□□ -2.35
CCNL1-223	ENST00000481173	KIAA1549	Q9HCM3	1950 aa		0.36	□□□□□ -2.35
CCNL1-223	ENST00000481173	TRBV7-1	A0A0A6YYK4	115 aa		0.36	□□□□□ -2.35
CCNL1-223	ENST00000481173	GNG7	O60262	68 aa		0.36	□□□□□ -2.35
CCNL1-223	ENST00000481173	APOC2	P02655	101 aa		0.36	□□□□□ -2.35
CCNL1-223	ENST00000481173	AKAIN1	P0CW23	69 aa		0.36	□□□□□ -2.35
CCNL1-223	ENST00000481173	HIST1H1D	P16402	221 aa	Known RBP	0.36	□□□□□ -2.35
CCNL1-223	ENST00000481173	CCL3L1	P16619	93 aa		0.36	□□□□□ -2.35
CCNL1-223	ENST00000481173	BTG2	P78543	158 aa		0.36	□□□□□ -2.35
CCNL1-223	ENST00000481173	MRPS10	P82664	201 aa	Known RBP	0.36	□□□□□ -2.35
CCNL1-223	ENST00000481173		Q56UQ5	140 aa		0.36	□□□□□ -2.35
CCNL1-223	ENST00000481173	MEIG1	Q5JSS6	88 aa		0.36	□□□□□ -2.35
CCNL1-223	ENST00000481173	C8orf59	Q8N0T1	100 aa	Predicted RBP	0.36	□□□□□ -2.35
CCNL1-223	ENST00000481173	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	0.36	□□□□□ -2.35
CCNL1-223	ENST00000481173	SPTSSB	Q8NFR3	76 aa		0.36	□□□□□ -2.35
CCNL1-223	ENST00000481173	SMIM11B	Q8TCY0	68 aa		0.36	□□□□□ -2.35

Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms