RNA–Protein interactions for RNA: ENST00000481109.5

PRPF4B-206, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 2,364 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-206ENST00000481109 VSIG2Q96IQ7 327 aa7.84□□□□□ -1.15
PRPF4B-206ENST00000481109 DAZ1Q9NQZ3 744 aaKnown RBP7.84□□□□□ -1.15
PRPF4B-206ENST00000481109 H7BZZ5 65 aa7.84□□□□□ -1.15
PRPF4B-206ENST00000481109 RNASE6Q93091 150 aaKnown RBP7.84□□□□□ -1.15
PRPF4B-206ENST00000481109 IGHV3-43A0A0B4J1X8 118 aa7.83□□□□□ -1.16
PRPF4B-206ENST00000481109 TRBV7-6A0A0J9YX20 115 aa7.83□□□□□ -1.16
PRPF4B-206ENST00000481109 C10orf142B7Z368 130 aa7.83□□□□□ -1.16
PRPF4B-206ENST00000481109 IGHV3-43DP0DP04 118 aa7.83□□□□□ -1.16
PRPF4B-206ENST00000481109 GATA1P15976 413 aaPredicted RBP7.83□□□□□ -1.16
PRPF4B-206ENST00000481109 TSPEAR-AS2P59090 65 aa7.83□□□□□ -1.16
PRPF4B-206ENST00000481109 DEFB133Q30KQ1 61 aa7.83□□□□□ -1.16
PRPF4B-206ENST00000481109 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.83□□□□□ -1.16
PRPF4B-206ENST00000481109 SMIM2Q9BVW6 85 aa7.83□□□□□ -1.16
PRPF4B-206ENST00000481109 IGLV4-69A0A075B6H9 119 aa7.83□□□□□ -1.16
PRPF4B-206ENST00000481109 IGHV3OR16-10A0A075B7F0 116 aa7.83□□□□□ -1.16
PRPF4B-206ENST00000481109 RBMY1BA6NDE4 496 aaKnown RBP7.83□□□□□ -1.16
PRPF4B-206ENST00000481109 RBMY1EA6NEQ0 496 aaKnown RBP7.83□□□□□ -1.16
PRPF4B-206ENST00000481109 FAM223BA6NKX1 122 aa7.83□□□□□ -1.16
PRPF4B-206ENST00000481109 LMO7DNF2Z398 122 aa7.83□□□□□ -1.16
PRPF4B-206ENST00000481109 BCE1O60756 84 aa7.83□□□□□ -1.16
PRPF4B-206ENST00000481109 RBMY1DP0C7P1 496 aaKnown RBP7.83□□□□□ -1.16
PRPF4B-206ENST00000481109 RBMY1A1P0DJD3 496 aaKnown RBP7.83□□□□□ -1.16
PRPF4B-206ENST00000481109 RBMY1CP0DJD4 496 aa7.83□□□□□ -1.16
PRPF4B-206ENST00000481109 LGALS3P17931 250 aaKnown RBP7.83□□□□□ -1.16
PRPF4B-206ENST00000481109 XCL1P47992 114 aa7.83□□□□□ -1.16
PRPF4B-206ENST00000481109 DLX1P56177 255 aa7.83□□□□□ -1.16
PRPF4B-206ENST00000481109 HOXA4Q00056 320 aaPredicted RBP7.83□□□□□ -1.16
PRPF4B-206ENST00000481109 RBMY1FQ15415 496 aaKnown RBP7.83□□□□□ -1.16
PRPF4B-206ENST00000481109 DYNAPQ8N1N2 210 aa7.83□□□□□ -1.16
PRPF4B-206ENST00000481109 PSMG3-AS1Q96PY0 264 aa7.83□□□□□ -1.16
PRPF4B-206ENST00000481109 XCL2Q9UBD3 114 aa7.83□□□□□ -1.16
PRPF4B-206ENST00000481109 DEFB108AA8MXU0 73 aa7.82□□□□□ -1.16
PRPF4B-206ENST00000481109 M0R3E3 92 aa7.82□□□□□ -1.16
PRPF4B-206ENST00000481109 PRSS2P07478 247 aa7.82□□□□□ -1.16
PRPF4B-206ENST00000481109 RPL39P5Q59GN2 51 aa7.82□□□□□ -1.16
PRPF4B-206ENST00000481109 NUP37Q8NFH4 326 aa7.82□□□□□ -1.16
PRPF4B-206ENST00000481109 CLEC2BQ92478 149 aa7.82□□□□□ -1.16
PRPF4B-206ENST00000481109 NDUFA4L2Q9NRX3 87 aa7.82□□□□□ -1.16
PRPF4B-206ENST00000481109 ASCC3Q8N3C0 2202 aaKnown RBP7.82□□□□□ -1.16
PRPF4B-206ENST00000481109 TRBV19A0A075B6N1 114 aa7.82□□□□□ -1.16
PRPF4B-206ENST00000481109 TRAV8-3A0A0A6YYJ7 113 aa7.82□□□□□ -1.16
PRPF4B-206ENST00000481109 IGHV3-20A0A0C4DH32 117 aa7.82□□□□□ -1.16
PRPF4B-206ENST00000481109 C8orf49Q96NF6 230 aa7.82□□□□□ -1.16
PRPF4B-206ENST00000481109 MSRB1Q9NZV6 116 aa7.82□□□□□ -1.16
PRPF4B-206ENST00000481109 RNF7Q9UBF6 113 aa7.82□□□□□ -1.16
PRPF4B-206ENST00000481109 UBE2D4Q9Y2X8 147 aa7.82□□□□□ -1.16
PRPF4B-206ENST00000481109 FER1L5A0AVI2 2057 aa7.81□□□□□ -1.16
PRPF4B-206ENST00000481109 H3BTX0 84 aa7.81□□□□□ -1.16
PRPF4B-206ENST00000481109 EGR2P11161 476 aaPredicted RBP7.81□□□□□ -1.16
PRPF4B-206ENST00000481109 I3L3M4 83 aa7.81□□□□□ -1.16
PRPF4B-206ENST00000481109 LOXP28300 417 aaPredicted RBP7.81□□□□□ -1.16
PRPF4B-206ENST00000481109 LYPD5Q6UWN5 251 aa7.81□□□□□ -1.16
PRPF4B-206ENST00000481109 FANCD2OSQ96PS1 177 aa7.81□□□□□ -1.16
PRPF4B-206ENST00000481109 INTS1Q8N201 2190 aaKnown RBP7.8□□□□□ -1.16
PRPF4B-206ENST00000481109 IGHV3-15A0A0B4J1V0 119 aa7.8□□□□□ -1.16
PRPF4B-206ENST00000481109 IGHV1-69DA0A0B4J2H0 117 aa7.8□□□□□ -1.16
PRPF4B-206ENST00000481109 PLAC8L1A1L4L8 177 aa7.8□□□□□ -1.16
PRPF4B-206ENST00000481109 LEPROTO15243 131 aa7.8□□□□□ -1.16
PRPF4B-206ENST00000481109 CCKP06307 115 aa7.8□□□□□ -1.16
PRPF4B-206ENST00000481109 ADORA2A-AS1P86434 159 aa7.8□□□□□ -1.16
PRPF4B-206ENST00000481109 CFHR1Q03591 330 aa7.8□□□□□ -1.16
PRPF4B-206ENST00000481109 KLKP1Q107X0 134 aa7.8□□□□□ -1.16
PRPF4B-206ENST00000481109 GNG12Q9UBI6 72 aa7.8□□□□□ -1.16
PRPF4B-206ENST00000481109 DAZ2Q13117 558 aaKnown RBP7.79□□□□□ -1.16
PRPF4B-206ENST00000481109 ZNF575Q86XF7 245 aa7.79□□□□□ -1.16
PRPF4B-206ENST00000481109 DAZ3Q9NR90 486 aaKnown RBP7.79□□□□□ -1.16
PRPF4B-206ENST00000481109 C2orf66Q6UXQ4 117 aa7.79□□□□□ -1.16
PRPF4B-206ENST00000481109 WDR86Q86TI4 376 aa7.79□□□□□ -1.16
PRPF4B-206ENST00000481109 FREM2Q5SZK8 3169 aa7.78□□□□□ -1.16
PRPF4B-206ENST00000481109 PVRIGQ6DKI7 326 aa7.78□□□□□ -1.16
PRPF4B-206ENST00000481109 IGHV1OR15-9A0A0B4J2B8 117 aa7.78□□□□□ -1.16
PRPF4B-206ENST00000481109 CGB1A6NKQ9 187 aa7.78□□□□□ -1.16
PRPF4B-206ENST00000481109 TIMM17BO60830 172 aa7.78□□□□□ -1.16
PRPF4B-206ENST00000481109 IGLV3-19P01714 112 aa7.78□□□□□ -1.16
PRPF4B-206ENST00000481109 HILS1P60008 231 aa7.78□□□□□ -1.16
PRPF4B-206ENST00000481109 MSMPQ1L6U9 139 aa7.78□□□□□ -1.16
PRPF4B-206ENST00000481109 C20orf197Q8N268 126 aa7.78□□□□□ -1.16
PRPF4B-206ENST00000481109 CCL21O00585 134 aa7.77□□□□□ -1.17
PRPF4B-206ENST00000481109 GHRHP01286 108 aa7.77□□□□□ -1.17
PRPF4B-206ENST00000481109 CELSR3Q9NYQ7 3312 aa7.77□□□□□ -1.17
PRPF4B-206ENST00000481109 DOCK7Q96N67 2140 aa7.77□□□□□ -1.17
PRPF4B-206ENST00000481109 IGIPA6NJ69 53 aa7.77□□□□□ -1.17
PRPF4B-206ENST00000481109 NDUFC1O43677 76 aa7.77□□□□□ -1.17
PRPF4B-206ENST00000481109 PDE6HQ13956 83 aa7.77□□□□□ -1.17
PRPF4B-206ENST00000481109 MRPL55Q7Z7F7 128 aaKnown RBP7.77□□□□□ -1.17
PRPF4B-206ENST00000481109 MRPL36Q9P0J6 103 aaKnown RBP7.77□□□□□ -1.17
PRPF4B-206ENST00000481109 IGHV4-4A0A075B6R2 117 aa7.76□□□□□ -1.17
PRPF4B-206ENST00000481109 IGHV1OR21-1A0A087WYE8 117 aa7.76□□□□□ -1.17
PRPF4B-206ENST00000481109 SNRPD3P62318 126 aaKnown RBP7.76□□□□□ -1.17
PRPF4B-206ENST00000481109 ATP5EP2Q5VTU8 51 aa7.76□□□□□ -1.17
PRPF4B-206ENST00000481109 TMEM141Q96I45 108 aa7.76□□□□□ -1.17
PRPF4B-206ENST00000481109 A0A087WVE0 104 aa7.76□□□□□ -1.17
PRPF4B-206ENST00000481109 SS18Q15532 418 aa7.76□□□□□ -1.17
PRPF4B-206ENST00000481109 LINC00474Q9P2X8 69 aa7.76□□□□□ -1.17
PRPF4B-206ENST00000481109 COX7A2LO14548 114 aa7.75□□□□□ -1.17
PRPF4B-206ENST00000481109 PAX4O43316 350 aa7.75□□□□□ -1.17
PRPF4B-206ENST00000481109 DKK1O94907 266 aa7.75□□□□□ -1.17
PRPF4B-206ENST00000481109 SAA4P35542 130 aa7.75□□□□□ -1.17
PRPF4B-206ENST00000481109 BEAN1Q3B7T3 259 aa7.75□□□□□ -1.17
PRPF4B-206ENST00000481109 C1orf229Q6ZS94 237 aaPredicted RBP7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 540.5 ms