RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 C9JQL5 133 aa13.88□□□□□ -0.19
LIME1-205ENST00000480139 H3BVH4 76 aa13.88□□□□□ -0.19
LIME1-205ENST00000480139 ARMS2P0C7Q2 107 aa13.88□□□□□ -0.19
LIME1-205ENST00000480139 RPL19P84098 196 aaKnown RBP13.88□□□□□ -0.19
LIME1-205ENST00000480139 ZNF876PQ49A33 203 aa13.88□□□□□ -0.19
LIME1-205ENST00000480139 PLECQ15149 4684 aaKnown RBP13.88□□□□□ -0.19
LIME1-205ENST00000480139 TRAV4A0A0B4J268 109 aa13.87□□□□□ -0.19
LIME1-205ENST00000480139 P01737 135 aa13.87□□□□□ -0.19
LIME1-205ENST00000480139 HOXA5P20719 270 aa13.87□□□□□ -0.19
LIME1-205ENST00000480139 RPS20P60866 119 aaKnown RBP13.87□□□□□ -0.19
LIME1-205ENST00000480139 TMEM88Q6PEY1 159 aa13.87□□□□□ -0.19
LIME1-205ENST00000480139 H3BNG1 76 aa13.85□□□□□ -0.19
LIME1-205ENST00000480139 CIDEAO60543 219 aa13.85□□□□□ -0.19
LIME1-205ENST00000480139 FAM231DQ6ZW35 169 aa13.85□□□□□ -0.19
LIME1-205ENST00000480139 LINC01551Q86U37 167 aa13.85□□□□□ -0.19
LIME1-205ENST00000480139 POM121L12Q8N7R1 296 aa13.85□□□□□ -0.19
LIME1-205ENST00000480139 C15orf53Q8NAA6 179 aa13.85□□□□□ -0.19
LIME1-205ENST00000480139 NUDT10Q8NFP7 164 aa13.85□□□□□ -0.19
LIME1-205ENST00000480139 NUDT11Q96G61 164 aa13.85□□□□□ -0.19
LIME1-205ENST00000480139 SSBP4Q9BWG4 385 aaPredicted RBP13.85□□□□□ -0.19
LIME1-205ENST00000480139 XKRY2A2RUG3 117 aa13.84□□□□□ -0.19
LIME1-205ENST00000480139 SNAI2O43623 268 aa13.84□□□□□ -0.19
LIME1-205ENST00000480139 OR5AL1P0C617 328 aa13.84□□□□□ -0.19
LIME1-205ENST00000480139 SLAQ13239 276 aa13.84□□□□□ -0.19
LIME1-205ENST00000480139 SYT8Q8NBV8 401 aa13.84□□□□□ -0.19
LIME1-205ENST00000480139 OR4C5Q8NGB2 326 aa13.84□□□□□ -0.19
LIME1-205ENST00000480139 OR2D3Q8NGH3 330 aa13.84□□□□□ -0.19
LIME1-205ENST00000480139 PHLDA3Q9Y5J5 127 aa13.84□□□□□ -0.19
LIME1-205ENST00000480139 RS1O15537 224 aa13.83□□□□□ -0.2
LIME1-205ENST00000480139 FHL2Q14192 279 aa13.83□□□□□ -0.2
LIME1-205ENST00000480139 ZNF479Q96JC4 524 aa13.83□□□□□ -0.2
LIME1-205ENST00000480139 NACAE9PAV3 2078 aa13.83□□□□□ -0.2
LIME1-205ENST00000480139 TRAV26-1A0A087WT03 109 aa13.82□□□□□ -0.2
LIME1-205ENST00000480139 LCE6AA0A183 80 aa13.82□□□□□ -0.2
LIME1-205ENST00000480139 A8MWV9 139 aa13.82□□□□□ -0.2
LIME1-205ENST00000480139 NXPH4O95158 308 aa13.82□□□□□ -0.2
LIME1-205ENST00000480139 IGHV3-53P01767 116 aa13.82□□□□□ -0.2
LIME1-205ENST00000480139 TMEM241Q24JQ0 296 aa13.82□□□□□ -0.2
LIME1-205ENST00000480139 CFAP126Q5VTH2 177 aa13.82□□□□□ -0.2
LIME1-205ENST00000480139 ZFP82Q8N141 532 aa13.82□□□□□ -0.2
LIME1-205ENST00000480139 RNASE7Q9H1E1 156 aaKnown RBP13.82□□□□□ -0.2
LIME1-205ENST00000480139 RPP21Q9H633 154 aaKnown RBP13.82□□□□□ -0.2
LIME1-205ENST00000480139 SFTA3P0C7M3 94 aa13.81□□□□□ -0.2
LIME1-205ENST00000480139 IGLC6P0CF74 106 aa13.81□□□□□ -0.2
LIME1-205ENST00000480139 SOHLH1Q5JUK2 328 aa13.81□□□□□ -0.2
LIME1-205ENST00000480139 DMRTA1Q5VZB9 504 aa13.81□□□□□ -0.2
LIME1-205ENST00000480139 LINC00476Q8WZB0 136 aa13.81□□□□□ -0.2
LIME1-205ENST00000480139 NAT8Q9UHE5 227 aa13.81□□□□□ -0.2
LIME1-205ENST00000480139 PRO0255Q9UI72 69 aa13.81□□□□□ -0.2
LIME1-205ENST00000480139 KMT2CQ8NEZ4 4911 aaKnown RBP13.81□□□□□ -0.2
LIME1-205ENST00000480139 TRGV4A0A0C4DH28 118 aa13.8□□□□□ -0.2
LIME1-205ENST00000480139 LGALS9CQ6DKI2 356 aa13.8□□□□□ -0.2
LIME1-205ENST00000480139 ZFP2Q6ZN57 461 aa13.8□□□□□ -0.2
LIME1-205ENST00000480139 HHLA3Q9XRX5 114 aa13.8□□□□□ -0.2
LIME1-205ENST00000480139 A0A1W2PPQ1 181 aa13.79□□□□□ -0.2
LIME1-205ENST00000480139 CRYBA4P53673 196 aa13.79□□□□□ -0.2
LIME1-205ENST00000480139 ERVFC1-1P60608 527 aa13.79□□□□□ -0.2
LIME1-205ENST00000480139 CT83Q5H943 113 aa13.79□□□□□ -0.2
LIME1-205ENST00000480139 FER1L6-AS1Q8NA97 138 aa13.79□□□□□ -0.2
LIME1-205ENST00000480139 OR10AG1Q8NH19 301 aa13.79□□□□□ -0.2
LIME1-205ENST00000480139 VSIG2Q96IQ7 327 aa13.79□□□□□ -0.2
LIME1-205ENST00000480139 LYSTQ99698 3801 aa13.79□□□□□ -0.2
LIME1-205ENST00000480139 F2Z2F3 143 aa13.78□□□□□ -0.2
LIME1-205ENST00000480139 M0R381 172 aa13.78□□□□□ -0.2
LIME1-205ENST00000480139 GATCO43716 136 aaKnown RBP13.78□□□□□ -0.2
LIME1-205ENST00000480139 GZMBP10144 247 aa13.78□□□□□ -0.2
LIME1-205ENST00000480139 RPL23P62829 140 aaKnown RBP13.78□□□□□ -0.2
LIME1-205ENST00000480139 UQCC3Q6UW78 93 aa13.78□□□□□ -0.2
LIME1-205ENST00000480139 SFRP2Q96HF1 295 aa13.78□□□□□ -0.2
LIME1-205ENST00000480139 OSTCQ9NRP0 149 aa13.78□□□□□ -0.2
LIME1-205ENST00000480139 A0A0J9YY99 117 aa13.77□□□□□ -0.21
LIME1-205ENST00000480139 PAX4O43316 350 aa13.77□□□□□ -0.21
LIME1-205ENST00000480139 P0DMU3 169 aa13.77□□□□□ -0.21
LIME1-205ENST00000480139 FAM231AP0DMU4 169 aa13.77□□□□□ -0.21
LIME1-205ENST00000480139 FAM231CP0DMU5 169 aa13.77□□□□□ -0.21
LIME1-205ENST00000480139 GATA1P15976 413 aaPredicted RBP13.77□□□□□ -0.21
LIME1-205ENST00000480139 ISOC2Q96AB3 205 aa13.77□□□□□ -0.21
LIME1-205ENST00000480139 ALMS1Q8TCU4 4167 aa13.76□□□□□ -0.21
LIME1-205ENST00000480139 RHODO00212 210 aa13.76□□□□□ -0.21
LIME1-205ENST00000480139 CTRLP40313 264 aa13.76□□□□□ -0.21
LIME1-205ENST00000480139 SPANXN1Q5VSR9 72 aa13.76□□□□□ -0.21
LIME1-205ENST00000480139 UFSP1Q6NVU6 142 aa13.76□□□□□ -0.21
LIME1-205ENST00000480139 TRBV6-4A0A1B0GX49 114 aa13.75□□□□□ -0.21
LIME1-205ENST00000480139 A8MWL6 223 aa13.75□□□□□ -0.21
LIME1-205ENST00000480139 NUDT3O95989 172 aa13.75□□□□□ -0.21
LIME1-205ENST00000480139 CACNG7P62955 275 aa13.75□□□□□ -0.21
LIME1-205ENST00000480139 ADIRFQ15847 76 aa13.75□□□□□ -0.21
LIME1-205ENST00000480139 C15orf54Q8N8G6 183 aa13.75□□□□□ -0.21
LIME1-205ENST00000480139 JPT2Q9H910 190 aa13.75□□□□□ -0.21
LIME1-205ENST00000480139 WDR73Q6P4I2 378 aa13.74□□□□□ -0.21
LIME1-205ENST00000480139 TPPP3Q9BW30 176 aa13.74□□□□□ -0.21
LIME1-205ENST00000480139 CNFNQ9BYD5 112 aa13.74□□□□□ -0.21
LIME1-205ENST00000480139 LY6G6CO95867 125 aa13.73□□□□□ -0.21
LIME1-205ENST00000480139 CRYGDP07320 174 aa13.73□□□□□ -0.21
LIME1-205ENST00000480139 RNF212Q495C1 297 aa13.73□□□□□ -0.21
LIME1-205ENST00000480139 LYZL1Q6UWQ5 148 aa13.73□□□□□ -0.21
LIME1-205ENST00000480139 SAMD10Q9BYL1 202 aa13.73□□□□□ -0.21
LIME1-205ENST00000480139 GFRA4Q9GZZ7 299 aa13.73□□□□□ -0.21
LIME1-205ENST00000480139 ICOSQ9Y6W8 199 aa13.73□□□□□ -0.21
LIME1-205ENST00000480139 A0A096LPF7 62 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms