RNA–Protein interactions for RNA: ENST00000480022.1

CHD6-208, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 2,829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-208ENST00000480022 NTN5Q8WTR8 489 aaPredicted RBP8.39□□□□□ -1.07
CHD6-208ENST00000480022 ANKHD1Q8IWZ3 2542 aaKnown RBP8.38□□□□□ -1.07
CHD6-208ENST00000480022 PLXNB1O43157 2135 aa8.38□□□□□ -1.07
CHD6-208ENST00000480022 H3BRN7 92 aa8.38□□□□□ -1.07
CHD6-208ENST00000480022 FAM201AQ5SY85 155 aa8.38□□□□□ -1.07
CHD6-208ENST00000480022 DTX2Q86UW9 622 aa8.38□□□□□ -1.07
CHD6-208ENST00000480022 PRR25Q96S07 402 aa8.38□□□□□ -1.07
CHD6-208ENST00000480022 LINC01587Q99440 93 aa8.38□□□□□ -1.07
CHD6-208ENST00000480022 TPSG1Q9NRR2 321 aa8.38□□□□□ -1.07
CHD6-208ENST00000480022 DNAJC30Q96LL9 226 aa8.38□□□□□ -1.07
CHD6-208ENST00000480022 ZNF561-AS1K7EIQ3 104 aa8.37□□□□□ -1.07
CHD6-208ENST00000480022 CFC1BP0CG36 223 aa8.37□□□□□ -1.07
CHD6-208ENST00000480022 CFC1P0CG37 223 aa8.37□□□□□ -1.07
CHD6-208ENST00000480022 APELAP0DMC3 54 aa8.37□□□□□ -1.07
CHD6-208ENST00000480022 SLC25A16P16260 332 aa8.37□□□□□ -1.07
CHD6-208ENST00000480022 C3orf56Q8N813 242 aa8.37□□□□□ -1.07
CHD6-208ENST00000480022 TRAV2A0A0B4J234 112 aa8.37□□□□□ -1.07
CHD6-208ENST00000480022 LHBP01229 141 aa8.37□□□□□ -1.07
CHD6-208ENST00000480022 ORM1P02763 201 aa8.37□□□□□ -1.07
CHD6-208ENST00000480022 ZNF80P51504 273 aaPredicted RBP8.37□□□□□ -1.07
CHD6-208ENST00000480022 CRIP2P52943 208 aaPredicted RBP8.37□□□□□ -1.07
CHD6-208ENST00000480022 SRSF2Q01130 221 aaKnown RBP8.37□□□□□ -1.07
CHD6-208ENST00000480022 CTSZQ9UBR2 303 aa8.37□□□□□ -1.07
CHD6-208ENST00000480022 PRO1854Q9UHT4 67 aa8.37□□□□□ -1.07
CHD6-208ENST00000480022 USP9YO00507 2555 aaPredicted RBP8.37□□□□□ -1.07
CHD6-208ENST00000480022 HLA-DMBP28068 263 aa8.36□□□□□ -1.07
CHD6-208ENST00000480022 RPL27AP46776 148 aaKnown RBP8.36□□□□□ -1.07
CHD6-208ENST00000480022 KIR2DL5BQ8NHK3 375 aa8.36□□□□□ -1.07
CHD6-208ENST00000480022 C21orf62Q9NYP8 219 aa8.36□□□□□ -1.07
CHD6-208ENST00000480022 IGKV2-40A0A087WW87 121 aaPredicted RBP8.36□□□□□ -1.07
CHD6-208ENST00000480022 MRPS12O15235 138 aaKnown RBP8.36□□□□□ -1.07
CHD6-208ENST00000480022 IGKV2D-40P01614 121 aaPredicted RBP8.36□□□□□ -1.07
CHD6-208ENST00000480022 TMEM155Q4W5P6 130 aa8.36□□□□□ -1.07
CHD6-208ENST00000480022 TRPT1Q86TN4 253 aaKnown RBP8.36□□□□□ -1.07
CHD6-208ENST00000480022 RPL13AP40429 203 aaKnown RBP8.35□□□□□ -1.07
CHD6-208ENST00000480022 PDE6HQ13956 83 aa8.35□□□□□ -1.07
CHD6-208ENST00000480022 MRGPRG-AS1Q2M3A8 158 aa8.35□□□□□ -1.07
CHD6-208ENST00000480022 ZNF575Q86XF7 245 aa8.35□□□□□ -1.07
CHD6-208ENST00000480022 NEXN-AS1Q8NBZ9 246 aa8.35□□□□□ -1.07
CHD6-208ENST00000480022 SCGB3A1Q96QR1 104 aa8.35□□□□□ -1.07
CHD6-208ENST00000480022 CHCHD5Q9BSY4 110 aa8.35□□□□□ -1.07
CHD6-208ENST00000480022 DCHS2Q6V1P9 2916 aa8.35□□□□□ -1.07
CHD6-208ENST00000480022 IGLV3-9A0A075B6K5 115 aa8.35□□□□□ -1.07
CHD6-208ENST00000480022 DUSP14O95147 198 aaKnown RBP8.35□□□□□ -1.07
CHD6-208ENST00000480022 NRACQ8N912 160 aa8.35□□□□□ -1.07
CHD6-208ENST00000480022 GAFA1Q96PS6 74 aa8.35□□□□□ -1.07
CHD6-208ENST00000480022 A0A0J9YY99 117 aa8.35□□□□□ -1.07
CHD6-208ENST00000480022 IGKV1-17P01599 117 aa8.35□□□□□ -1.07
CHD6-208ENST00000480022 DEFB108BQ8NET1 73 aa8.35□□□□□ -1.07
CHD6-208ENST00000480022 CCL13Q99616 98 aa8.35□□□□□ -1.07
CHD6-208ENST00000480022 ABCA1O95477 2261 aa8.34□□□□□ -1.07
CHD6-208ENST00000480022 FASNP49327 2511 aaKnown RBP8.34□□□□□ -1.07
CHD6-208ENST00000480022 LINC00694P0DN24 101 aa8.34□□□□□ -1.07
CHD6-208ENST00000480022 FAM216BQ8N7L0 139 aa8.34□□□□□ -1.07
CHD6-208ENST00000480022 KLHL30-AS1Q8NEE0 82 aa8.34□□□□□ -1.07
CHD6-208ENST00000480022 Q8TAT8 98 aa8.34□□□□□ -1.07
CHD6-208ENST00000480022 SIGLEC9Q9Y336 463 aa8.34□□□□□ -1.07
CHD6-208ENST00000480022 SPTAN1Q13813 2472 aaKnown RBP8.34□□□□□ -1.07
CHD6-208ENST00000480022 HRNRQ86YZ3 2850 aaPredicted RBP8.34□□□□□ -1.07
CHD6-208ENST00000480022 TEX49A0A1B0GTD5 131 aa8.34□□□□□ -1.07
CHD6-208ENST00000480022 TIMM23O14925 209 aa8.34□□□□□ -1.07
CHD6-208ENST00000480022 IGHV3-30P01768 117 aa8.34□□□□□ -1.07
CHD6-208ENST00000480022 IGHV3-30-5P0DP03 117 aa8.34□□□□□ -1.07
CHD6-208ENST00000480022 OXLD1Q5BKU9 147 aa8.34□□□□□ -1.07
CHD6-208ENST00000480022 ICE1Q9Y2F5 2266 aa8.33□□□□□ -1.08
CHD6-208ENST00000480022 A0A0U1RRA0 63 aa8.33□□□□□ -1.08
CHD6-208ENST00000480022 KLK15Q9H2R5 256 aa8.33□□□□□ -1.08
CHD6-208ENST00000480022 FBN2P35556 2912 aa8.33□□□□□ -1.08
CHD6-208ENST00000480022 CRYBG3Q68DQ2 2970 aa8.33□□□□□ -1.08
CHD6-208ENST00000480022 LGALS9O00182 355 aa8.33□□□□□ -1.08
CHD6-208ENST00000480022 IL17RELQ6ZVW7 336 aa8.33□□□□□ -1.08
CHD6-208ENST00000480022 TIMD4Q96H15 378 aa8.33□□□□□ -1.08
CHD6-208ENST00000480022 LINC01600Q96MT4 127 aa8.33□□□□□ -1.08
CHD6-208ENST00000480022 CADP27708 2225 aa8.33□□□□□ -1.08
CHD6-208ENST00000480022 TRAV26-2A0A0B4J265 109 aa8.32□□□□□ -1.08
CHD6-208ENST00000480022 H3BMM0 161 aa8.32□□□□□ -1.08
CHD6-208ENST00000480022 SPRY3O43610 288 aa8.32□□□□□ -1.08
CHD6-208ENST00000480022 TRGV3P03979 118 aa8.32□□□□□ -1.08
CHD6-208ENST00000480022 P0DMU3 169 aa8.32□□□□□ -1.08
CHD6-208ENST00000480022 FAM231AP0DMU4 169 aa8.32□□□□□ -1.08
CHD6-208ENST00000480022 FAM231CP0DMU5 169 aa8.32□□□□□ -1.08
CHD6-208ENST00000480022 ATXN8Q156A1 80 aa8.32□□□□□ -1.08
CHD6-208ENST00000480022 LINC01620Q4KN68 170 aa8.32□□□□□ -1.08
CHD6-208ENST00000480022 ZNF491Q8N8L2 437 aa8.32□□□□□ -1.08
CHD6-208ENST00000480022 UBE2WQ96B02 151 aa8.32□□□□□ -1.08
CHD6-208ENST00000480022 TOMM6Q96B49 74 aa8.32□□□□□ -1.08
CHD6-208ENST00000480022 RAI1Q7Z5J4 1906 aaPredicted RBP8.32□□□□□ -1.08
CHD6-208ENST00000480022 I3L2K1 104 aa8.32□□□□□ -1.08
CHD6-208ENST00000480022 ENSAO43768 121 aaKnown RBP8.32□□□□□ -1.08
CHD6-208ENST00000480022 RPL7P18124 248 aaKnown RBP8.32□□□□□ -1.08
CHD6-208ENST00000480022 KRTAP10-9P60411 292 aa8.32□□□□□ -1.08
CHD6-208ENST00000480022 ORMDL2Q53FV1 153 aa8.32□□□□□ -1.08
CHD6-208ENST00000480022 C11orf71Q6IPW1 123 aa8.32□□□□□ -1.08
CHD6-208ENST00000480022 RNF7Q9UBF6 113 aa8.32□□□□□ -1.08
CHD6-208ENST00000480022 DOPEY2Q9Y3R5 2298 aa8.31□□□□□ -1.08
CHD6-208ENST00000480022 HES1Q14469 280 aa8.31□□□□□ -1.08
CHD6-208ENST00000480022 BAALCQ8WXS3 180 aa8.31□□□□□ -1.08
CHD6-208ENST00000480022 SMIM2Q9BVW6 85 aa8.31□□□□□ -1.08
CHD6-208ENST00000480022 NBPF19A0A087WUL8 3843 aa8.31□□□□□ -1.08
CHD6-208ENST00000480022 CELSR2Q9HCU4 2923 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 1215.2 ms