RNA–Protein interactions for RNA: ENST00000479930.5

TTC3-216, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 1 (best)

Gene TTC3, Length 8,998 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-216ENST00000479930 IGLV3-25P01717 112 aa7.17□□□□□ -1.26
TTC3-216ENST00000479930 ZNF493Q6ZR52 646 aa7.16□□□□□ -1.26
TTC3-216ENST00000479930 JMJD7-PLA2G4BH0Y9G9 81 aa7.16□□□□□ -1.26
TTC3-216ENST00000479930 MST1P26927 711 aa7.16□□□□□ -1.26
TTC3-216ENST00000479930 NDUFC2O95298 119 aa7.16□□□□□ -1.26
TTC3-216ENST00000479930 FAM229AH3BQW9 127 aa7.16□□□□□ -1.26
TTC3-216ENST00000479930 C12orf73Q69YU5 71 aa7.16□□□□□ -1.26
TTC3-216ENST00000479930 GPR179Q6PRD1 2367 aa7.15□□□□□ -1.26
TTC3-216ENST00000479930 TRAV23DV6A0A075B6W5 121 aa7.15□□□□□ -1.26
TTC3-216ENST00000479930 C16orf54Q6UWD8 224 aa7.15□□□□□ -1.26
TTC3-216ENST00000479930 IGKV1D-17A0A075B6S4 117 aa7.15□□□□□ -1.26
TTC3-216ENST00000479930 TEX36Q5VZQ5 186 aa7.15□□□□□ -1.26
TTC3-216ENST00000479930 SPATA12Q7Z6I5 190 aa7.15□□□□□ -1.26
TTC3-216ENST00000479930 MT-ATP8P03928 68 aa7.15□□□□□ -1.26
TTC3-216ENST00000479930 TRBV5-4A0A0C4DH59 114 aa7.15□□□□□ -1.27
TTC3-216ENST00000479930 YPEL1O60688 119 aa7.15□□□□□ -1.27
TTC3-216ENST00000479930 YPEL2Q96QA6 119 aa7.15□□□□□ -1.27
TTC3-216ENST00000479930 CRYBA4P53673 196 aa7.15□□□□□ -1.27
TTC3-216ENST00000479930 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.14□□□□□ -1.27
TTC3-216ENST00000479930 MYCNOSP40205 109 aa7.14□□□□□ -1.27
TTC3-216ENST00000479930 K7EQD1 137 aa7.14□□□□□ -1.27
TTC3-216ENST00000479930 P0DMU3 169 aa7.14□□□□□ -1.27
TTC3-216ENST00000479930 FAM231AP0DMU4 169 aa7.14□□□□□ -1.27
TTC3-216ENST00000479930 FAM231CP0DMU5 169 aa7.14□□□□□ -1.27
TTC3-216ENST00000479930 LOXP28300 417 aaPredicted RBP7.14□□□□□ -1.27
TTC3-216ENST00000479930 BCL6BQ8N143 479 aaPredicted RBP7.14□□□□□ -1.27
TTC3-216ENST00000479930 DIRC1Q969H9 104 aa7.14□□□□□ -1.27
TTC3-216ENST00000479930 AGMATQ9BSE5 352 aa7.14□□□□□ -1.27
TTC3-216ENST00000479930 DMKNQ6E0U4 476 aaPredicted RBP7.14□□□□□ -1.27
TTC3-216ENST00000479930 LHFPL6Q9Y693 200 aa7.14□□□□□ -1.27
TTC3-216ENST00000479930 SPAG11BQ08648 103 aa7.14□□□□□ -1.27
TTC3-216ENST00000479930 TM2D1Q9BX74 207 aa7.14□□□□□ -1.27
TTC3-216ENST00000479930 SRSF3P84103 164 aaKnown RBP7.13□□□□□ -1.27
TTC3-216ENST00000479930 NUP35Q8NFH5 326 aa7.13□□□□□ -1.27
TTC3-216ENST00000479930 TRBV12-3P01733 135 aa7.13□□□□□ -1.27
TTC3-216ENST00000479930 IFI6P09912 130 aa7.13□□□□□ -1.27
TTC3-216ENST00000479930 GGACTQ9BVM4 153 aa7.13□□□□□ -1.27
TTC3-216ENST00000479930 ZNF491Q8N8L2 437 aa7.13□□□□□ -1.27
TTC3-216ENST00000479930 LY6G6FQ5SQ64 297 aa7.13□□□□□ -1.27
TTC3-216ENST00000479930 TCF20Q9UGU0 1960 aaKnown RBP7.13□□□□□ -1.27
TTC3-216ENST00000479930 PINLYPA6NC86 204 aa7.13□□□□□ -1.27
TTC3-216ENST00000479930 SLC25A29Q8N8R3 303 aa7.12□□□□□ -1.27
TTC3-216ENST00000479930 ZNF319Q9P2F9 582 aa7.12□□□□□ -1.27
TTC3-216ENST00000479930 KIAA0040Q15053 153 aa7.12□□□□□ -1.27
TTC3-216ENST00000479930 SIRPDQ9H106 197 aa7.12□□□□□ -1.27
TTC3-216ENST00000479930 ATG2AQ2TAZ0 1938 aa7.12□□□□□ -1.27
TTC3-216ENST00000479930 A0A087WWC5 75 aa7.12□□□□□ -1.27
TTC3-216ENST00000479930 A6NDX4 124 aa7.12□□□□□ -1.27
TTC3-216ENST00000479930 SPATA31B1PQ5VZV4 182 aa7.12□□□□□ -1.27
TTC3-216ENST00000479930 MRPL53Q96EL3 112 aaKnown RBP7.12□□□□□ -1.27
TTC3-216ENST00000479930 A0A1W2PR77 199 aa7.12□□□□□ -1.27
TTC3-216ENST00000479930 CD300LDQ6UXZ3 194 aa7.12□□□□□ -1.27
TTC3-216ENST00000479930 TMEM61Q8N0U2 210 aa7.12□□□□□ -1.27
TTC3-216ENST00000479930 SMPXQ9UHP9 88 aa7.12□□□□□ -1.27
TTC3-216ENST00000479930 WDR86Q86TI4 376 aa7.12□□□□□ -1.27
TTC3-216ENST00000479930 TMEM141Q96I45 108 aa7.12□□□□□ -1.27
TTC3-216ENST00000479930 COL18A1P39060 1754 aa7.12□□□□□ -1.27
TTC3-216ENST00000479930 LINC00322Q6ZN03 302 aaPredicted RBP7.12□□□□□ -1.27
TTC3-216ENST00000479930 UBE2CO00762 179 aa7.11□□□□□ -1.27
TTC3-216ENST00000479930 PLAC8L1A1L4L8 177 aa7.11□□□□□ -1.27
TTC3-216ENST00000479930 CHD8Q9HCK8 2581 aa7.11□□□□□ -1.27
TTC3-216ENST00000479930 FAM236AA0A1B0GUQ0 79 aa7.11□□□□□ -1.27
TTC3-216ENST00000479930 FAM236BA0A1B0GV22 79 aa7.11□□□□□ -1.27
TTC3-216ENST00000479930 BVES-AS1Q5T3Y7 98 aa7.11□□□□□ -1.27
TTC3-216ENST00000479930 USP9XQ93008 2570 aaPredicted RBP7.11□□□□□ -1.27
TTC3-216ENST00000479930 IFITM1P13164 125 aa7.11□□□□□ -1.27
TTC3-216ENST00000479930 PNRC2Q9NPJ4 139 aaKnown RBP7.11□□□□□ -1.27
TTC3-216ENST00000479930 C5orf63A6NC05 138 aa7.11□□□□□ -1.27
TTC3-216ENST00000479930 KLK8O60259 260 aa7.11□□□□□ -1.27
TTC3-216ENST00000479930 SRP19P09132 144 aaKnown RBP7.11□□□□□ -1.27
TTC3-216ENST00000479930 ZNF843Q8N446 348 aa7.11□□□□□ -1.27
TTC3-216ENST00000479930 TCL1BO95988 128 aa7.11□□□□□ -1.27
TTC3-216ENST00000479930 LINC01620Q4KN68 170 aa7.11□□□□□ -1.27
TTC3-216ENST00000479930 MSRB3Q8IXL7 192 aa7.11□□□□□ -1.27
TTC3-216ENST00000479930 TRAV26-1A0A087WT03 109 aa7.1□□□□□ -1.27
TTC3-216ENST00000479930 CLUHP3Q96NS8 147 aa7.1□□□□□ -1.27
TTC3-216ENST00000479930 SLX1AQ9BQ83 275 aa7.1□□□□□ -1.27
TTC3-216ENST00000479930 PSMB8P28062 276 aa7.1□□□□□ -1.27
TTC3-216ENST00000479930 CARD19Q96LW7 228 aa7.1□□□□□ -1.27
TTC3-216ENST00000479930 TRAV10A0A0B4J240 114 aa7.1□□□□□ -1.27
TTC3-216ENST00000479930 SHISA4Q96DD7 197 aa7.1□□□□□ -1.27
TTC3-216ENST00000479930 CHCHD2Q9Y6H1 151 aaPredicted RBP7.1□□□□□ -1.27
TTC3-216ENST00000479930 PKD1L2Q7Z442 2459 aa7.1□□□□□ -1.27
TTC3-216ENST00000479930 CRYGBP07316 175 aa7.1□□□□□ -1.27
TTC3-216ENST00000479930 FOXI2Q6ZQN5 318 aa7.1□□□□□ -1.27
TTC3-216ENST00000479930 ADAMTSL5Q6ZMM2 481 aa7.1□□□□□ -1.27
TTC3-216ENST00000479930 LY6G6DO95868 133 aa7.09□□□□□ -1.27
TTC3-216ENST00000479930 OPRPNQ99935 248 aaPredicted RBP7.09□□□□□ -1.27
TTC3-216ENST00000479930 COL5A1P20908 1838 aaPredicted RBP7.09□□□□□ -1.27
TTC3-216ENST00000479930 IGHV7-4-1A0A0J9YVY3 117 aa7.09□□□□□ -1.27
TTC3-216ENST00000479930 Q9H8V8 135 aa7.09□□□□□ -1.27
TTC3-216ENST00000479930 C1orf158Q8N1D5 194 aa7.09□□□□□ -1.27
TTC3-216ENST00000479930 Q96M66 194 aa7.09□□□□□ -1.27
TTC3-216ENST00000479930 NDUFA11Q86Y39 141 aa7.09□□□□□ -1.27
TTC3-216ENST00000479930 USP9YO00507 2555 aaPredicted RBP7.09□□□□□ -1.27
TTC3-216ENST00000479930 SDHAF1A6NFY7 115 aa7.09□□□□□ -1.27
TTC3-216ENST00000479930 RNF5Q99942 180 aa7.09□□□□□ -1.27
TTC3-216ENST00000479930 SIVA1O15304 175 aa7.08□□□□□ -1.28
TTC3-216ENST00000479930 FGF6P10767 208 aa7.08□□□□□ -1.28
TTC3-216ENST00000479930 GAFA1Q96PS6 74 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms