RNA–Protein interactions for RNA: ENST00000479625.1

GPNMB-211, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 788 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-211ENST00000479625 TMEM75Q8N9X5 138 aa6.18□□□□□ -1.42
GPNMB-211ENST00000479625 ASB13Q8WXK3 278 aa6.18□□□□□ -1.42
GPNMB-211ENST00000479625 TVP23CQ96ET8 276 aa6.18□□□□□ -1.42
GPNMB-211ENST00000479625 NPCDR1Q9BY65 106 aa6.18□□□□□ -1.42
GPNMB-211ENST00000479625 SAMD10Q9BYL1 202 aa6.18□□□□□ -1.42
GPNMB-211ENST00000479625 SLIRPQ9GZT3 109 aaKnown RBP6.18□□□□□ -1.42
GPNMB-211ENST00000479625 C20orf85Q9H1P6 137 aa6.18□□□□□ -1.42
GPNMB-211ENST00000479625 C11orf21Q9P2W6 132 aa6.18□□□□□ -1.42
GPNMB-211ENST00000479625 LENEPQ9Y5L5 61 aa6.18□□□□□ -1.42
GPNMB-211ENST00000479625 V9GYH0 126 aa6.18□□□□□ -1.42
GPNMB-211ENST00000479625 A0A0D9SG52 128 aa6.17□□□□□ -1.42
GPNMB-211ENST00000479625 USP17L23D6RBM5 183 aa6.17□□□□□ -1.42
GPNMB-211ENST00000479625 OR7C2O60412 319 aa6.17□□□□□ -1.42
GPNMB-211ENST00000479625 PRSS1P07477 247 aa6.17□□□□□ -1.42
GPNMB-211ENST00000479625 C14orf177Q52M58 125 aa6.17□□□□□ -1.42
GPNMB-211ENST00000479625 C14orf178Q8N769 122 aaPredicted RBP6.17□□□□□ -1.42
GPNMB-211ENST00000479625 OR2T35Q8NGX2 323 aa6.17□□□□□ -1.42
GPNMB-211ENST00000479625 C2orf50Q96LR7 162 aa6.17□□□□□ -1.42
GPNMB-211ENST00000479625 HYLS1Q96M11 299 aa6.17□□□□□ -1.42
GPNMB-211ENST00000479625 ATP5SQ99766 215 aa6.17□□□□□ -1.42
GPNMB-211ENST00000479625 BCL7BQ9BQE9 202 aa6.17□□□□□ -1.42
GPNMB-211ENST00000479625 PARLQ9H300 379 aa6.17□□□□□ -1.42
GPNMB-211ENST00000479625 DPH3P1Q9H4G8 78 aa6.17□□□□□ -1.42
GPNMB-211ENST00000479625 CIDEAO60543 219 aa6.16□□□□□ -1.42
GPNMB-211ENST00000479625 EIF3GO75821 320 aaKnown RBP eCLIP6.16□□□□□ -1.42
GPNMB-211ENST00000479625 NDUFB6O95139 128 aa6.16□□□□□ -1.42
GPNMB-211ENST00000479625 SULT1A1P50225 295 aa6.16□□□□□ -1.42
GPNMB-211ENST00000479625 UBE2L3P68036 154 aaKnown RBP6.16□□□□□ -1.42
GPNMB-211ENST00000479625 FFAR4Q5NUL3 377 aa6.16□□□□□ -1.42
GPNMB-211ENST00000479625 C9orf163Q8N9P6 203 aa6.16□□□□□ -1.42
GPNMB-211ENST00000479625 THAP6Q8TBB0 222 aa6.16□□□□□ -1.42
GPNMB-211ENST00000479625 CHAC2Q8WUX2 184 aa6.16□□□□□ -1.42
GPNMB-211ENST00000479625 KCNS1Q96KK3 526 aa6.16□□□□□ -1.42
GPNMB-211ENST00000479625 C9orf85Q96MD7 179 aa6.16□□□□□ -1.42
GPNMB-211ENST00000479625 C1orf43Q9BWL3 253 aa6.16□□□□□ -1.42
GPNMB-211ENST00000479625 A0A087WWC5 75 aa6.15□□□□□ -1.42
GPNMB-211ENST00000479625 A0A087WX48 190 aa6.15□□□□□ -1.42
GPNMB-211ENST00000479625 FAM25EA8MYX2 175 aa6.15□□□□□ -1.42
GPNMB-211ENST00000479625 CHTF8P0CG12 524 aa6.15□□□□□ -1.42
GPNMB-211ENST00000479625 ZNF80P51504 273 aaPredicted RBP6.15□□□□□ -1.42
GPNMB-211ENST00000479625 GOLT1AQ6ZVE7 132 aa6.15□□□□□ -1.42
GPNMB-211ENST00000479625 TMEM252Q8N6L7 170 aa6.15□□□□□ -1.42
GPNMB-211ENST00000479625 MITD1Q8WV92 249 aa6.15□□□□□ -1.42
GPNMB-211ENST00000479625 TMED6Q8WW62 240 aa6.15□□□□□ -1.42
GPNMB-211ENST00000479625 ZC2HC1AQ96GY0 325 aa6.15□□□□□ -1.42
GPNMB-211ENST00000479625 LINC01600Q96MT4 127 aa6.15□□□□□ -1.42
GPNMB-211ENST00000479625 TREM1Q9NP99 234 aa6.15□□□□□ -1.42
GPNMB-211ENST00000479625 LYRM2Q9NU23 88 aaPredicted RBP6.15□□□□□ -1.42
GPNMB-211ENST00000479625 PHOX2AO14813 284 aa6.14□□□□□ -1.43
GPNMB-211ENST00000479625 RNASE3P12724 160 aaKnown RBP6.14□□□□□ -1.43
GPNMB-211ENST00000479625 S100A11P31949 105 aa6.14□□□□□ -1.43
GPNMB-211ENST00000479625 S100A10P60903 97 aa6.14□□□□□ -1.43
GPNMB-211ENST00000479625 GNG5P63218 68 aa6.14□□□□□ -1.43
GPNMB-211ENST00000479625 SPANXN2Q5MJ10 180 aa6.14□□□□□ -1.43
GPNMB-211ENST00000479625 ENHOQ6UWT2 76 aa6.14□□□□□ -1.43
GPNMB-211ENST00000479625 SDIM1Q6ZPB5 146 aa6.14□□□□□ -1.43
GPNMB-211ENST00000479625 STX12Q86Y82 276 aa6.14□□□□□ -1.43
GPNMB-211ENST00000479625 DEDD2Q8WXF8 326 aa6.14□□□□□ -1.43
GPNMB-211ENST00000479625 SGK494Q96LW2 274 aa6.14□□□□□ -1.43
GPNMB-211ENST00000479625 LINC00479Q96M42 142 aa6.14□□□□□ -1.43
GPNMB-211ENST00000479625 SH3BGRL3Q9H299 93 aa6.14□□□□□ -1.43
GPNMB-211ENST00000479625 JPT2Q9H910 190 aa6.14□□□□□ -1.43
GPNMB-211ENST00000479625 KIF25-AS1Q9Y6Z4 181 aa6.14□□□□□ -1.43
GPNMB-211ENST00000479625 CRPP02741 224 aa6.13□□□□□ -1.43
GPNMB-211ENST00000479625 SEC11BP0C7V7 166 aa6.13□□□□□ -1.43
GPNMB-211ENST00000479625 BTCP35070 178 aa6.13□□□□□ -1.43
GPNMB-211ENST00000479625 HBG1P69891 147 aa6.13□□□□□ -1.43
GPNMB-211ENST00000479625 HBG2P69892 147 aa6.13□□□□□ -1.43
GPNMB-211ENST00000479625 Q0VG73 95 aa6.13□□□□□ -1.43
GPNMB-211ENST00000479625 CIRBPQ14011 172 aaKnown RBP6.13□□□□□ -1.43
GPNMB-211ENST00000479625 HSD17B11Q8NBQ5 300 aa6.13□□□□□ -1.43
GPNMB-211ENST00000479625 A0A087WYN8 130 aa6.12□□□□□ -1.43
GPNMB-211ENST00000479625 A0A0J9YXV3 536 aa6.12□□□□□ -1.43
GPNMB-211ENST00000479625 PGPA6NDG6 321 aa6.12□□□□□ -1.43
GPNMB-211ENST00000479625 PVALBP20472 110 aaPredicted RBP6.12□□□□□ -1.43
GPNMB-211ENST00000479625 RAB32Q13637 225 aa6.12□□□□□ -1.43
GPNMB-211ENST00000479625 ELOBQ15370 118 aa6.12□□□□□ -1.43
GPNMB-211ENST00000479625 MPV17L2Q567V2 206 aa6.12□□□□□ -1.43
GPNMB-211ENST00000479625 DGAT2L7PQ6IED9 249 aa6.12□□□□□ -1.43
GPNMB-211ENST00000479625 CLPSL2Q6UWE3 100 aa6.12□□□□□ -1.43
GPNMB-211ENST00000479625 ZFP2Q6ZN57 461 aa6.12□□□□□ -1.43
GPNMB-211ENST00000479625 C15orf54Q8N8G6 183 aa6.12□□□□□ -1.43
GPNMB-211ENST00000479625 OR10G9Q8NGN4 311 aa6.12□□□□□ -1.43
GPNMB-211ENST00000479625 NMES1Q9C002 83 aa6.12□□□□□ -1.43
GPNMB-211ENST00000479625 A8MWV9 139 aa6.11□□□□□ -1.43
GPNMB-211ENST00000479625 H3BMQ9 156 aa6.11□□□□□ -1.43
GPNMB-211ENST00000479625 GCGP01275 180 aa6.11□□□□□ -1.43
GPNMB-211ENST00000479625 NHLH2Q02577 135 aa6.11□□□□□ -1.43
GPNMB-211ENST00000479625 ATP6V1FQ16864 119 aa6.11□□□□□ -1.43
GPNMB-211ENST00000479625 LGALSLQ3ZCW2 172 aaPredicted RBP6.11□□□□□ -1.43
GPNMB-211ENST00000479625 UFSP1Q6NVU6 142 aa6.11□□□□□ -1.43
GPNMB-211ENST00000479625 KCNIP4Q6PIL6 250 aa6.11□□□□□ -1.43
GPNMB-211ENST00000479625 OR5C1Q8NGR4 320 aa6.11□□□□□ -1.43
GPNMB-211ENST00000479625 CMTM2Q8TAZ6 248 aa6.11□□□□□ -1.43
GPNMB-211ENST00000479625 PTH2Q96A98 100 aa6.11□□□□□ -1.43
GPNMB-211ENST00000479625 CHCHD7Q9BUK0 85 aa6.11□□□□□ -1.43
GPNMB-211ENST00000479625 MRPS26Q9BYN8 205 aaKnown RBP6.11□□□□□ -1.43
GPNMB-211ENST00000479625 OTORQ9NRC9 128 aa6.11□□□□□ -1.43
GPNMB-211ENST00000479625 TMEM262E9PQX1 116 aa6.1□□□□□ -1.43
GPNMB-211ENST00000479625 FGF8P55075 233 aaPredicted RBP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms