RNA–Protein interactions for RNA: ENST00000479339.5

CNKSR3-204, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best) BASIC

Gene CNKSR3, Length 2,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-204ENST00000479339 NDUFA3O95167 84 aa10.17□□□□□ -0.78
CNKSR3-204ENST00000479339 SRSF9Q13242 221 aaKnown RBP eCLIP10.17□□□□□ -0.78
CNKSR3-204ENST00000479339 MRPL20Q9BYC9 149 aaKnown RBP10.17□□□□□ -0.78
CNKSR3-204ENST00000479339 NF1P21359 2839 aa10.17□□□□□ -0.78
CNKSR3-204ENST00000479339 RPL13AP40429 203 aaKnown RBP10.17□□□□□ -0.78
CNKSR3-204ENST00000479339 VMA21Q3ZAQ7 101 aa10.17□□□□□ -0.78
CNKSR3-204ENST00000479339 DNAJC30Q96LL9 226 aa10.17□□□□□ -0.78
CNKSR3-204ENST00000479339 SHANK2-AS3Q9BTD1 123 aa10.17□□□□□ -0.78
CNKSR3-204ENST00000479339 RNF223E7ERA6 249 aa10.16□□□□□ -0.78
CNKSR3-204ENST00000479339 IGKV3-15P01624 115 aa10.16□□□□□ -0.78
CNKSR3-204ENST00000479339 CECR9P0C854 216 aa10.16□□□□□ -0.78
CNKSR3-204ENST00000479339 C10orf55Q5SWW7 151 aa10.16□□□□□ -0.78
CNKSR3-204ENST00000479339 SCGB1D4Q6XE38 83 aa10.16□□□□□ -0.78
CNKSR3-204ENST00000479339 C10orf126Q8N4M7 172 aa10.16□□□□□ -0.78
CNKSR3-204ENST00000479339 SETD2Q9BYW2 2564 aaPredicted RBP10.16□□□□□ -0.78
CNKSR3-204ENST00000479339 IGHV3OR15-7A0A075B7D8 119 aa10.16□□□□□ -0.78
CNKSR3-204ENST00000479339 TRAV8-4A0A0B4J246 113 aa10.16□□□□□ -0.78
CNKSR3-204ENST00000479339 LINC01548A6NM66 108 aa10.16□□□□□ -0.78
CNKSR3-204ENST00000479339 ZNF815PA8K554 130 aa10.16□□□□□ -0.78
CNKSR3-204ENST00000479339 H3BRN7 92 aa10.16□□□□□ -0.78
CNKSR3-204ENST00000479339 CRLF1O75462 422 aa10.16□□□□□ -0.78
CNKSR3-204ENST00000479339 SLC25A16P16260 332 aa10.16□□□□□ -0.78
CNKSR3-204ENST00000479339 HLA-DMBP28068 263 aa10.16□□□□□ -0.78
CNKSR3-204ENST00000479339 DSCR9P59020 149 aa10.16□□□□□ -0.78
CNKSR3-204ENST00000479339 KRTAP1-1Q07627 177 aa10.16□□□□□ -0.78
CNKSR3-204ENST00000479339 SPANXCQ9NY87 97 aa10.16□□□□□ -0.78
CNKSR3-204ENST00000479339 SCGB2A1O75556 95 aa10.15□□□□□ -0.78
CNKSR3-204ENST00000479339 NUP37Q8NFH4 326 aa10.15□□□□□ -0.78
CNKSR3-204ENST00000479339 PPDPFQ9H3Y8 114 aa10.15□□□□□ -0.78
CNKSR3-204ENST00000479339 CSDC2Q9Y534 153 aaKnown RBP10.15□□□□□ -0.78
CNKSR3-204ENST00000479339 HEATR1Q9H583 2144 aaKnown RBP10.15□□□□□ -0.79
CNKSR3-204ENST00000479339 ZFHX3Q15911 3703 aa10.14□□□□□ -0.79
CNKSR3-204ENST00000479339 LHBP01229 141 aa10.14□□□□□ -0.79
CNKSR3-204ENST00000479339 IGLV2-23P01705 113 aa10.14□□□□□ -0.79
CNKSR3-204ENST00000479339 EGR2P11161 476 aaPredicted RBP10.14□□□□□ -0.79
CNKSR3-204ENST00000479339 EFNA4P52798 201 aa10.14□□□□□ -0.79
CNKSR3-204ENST00000479339 C15orf53Q8NAA6 179 aa10.14□□□□□ -0.79
CNKSR3-204ENST00000479339 ODF3Q96PU9 254 aa10.14□□□□□ -0.79
CNKSR3-204ENST00000479339 PRADC1Q9BSG0 188 aa10.14□□□□□ -0.79
CNKSR3-204ENST00000479339 TNCP24821 2201 aa10.13□□□□□ -0.79
CNKSR3-204ENST00000479339 IGHV4-30-2A0A087WSY4 118 aa10.13□□□□□ -0.79
CNKSR3-204ENST00000479339 A0A096LNT2 108 aa10.13□□□□□ -0.79
CNKSR3-204ENST00000479339 B9A039 149 aa10.13□□□□□ -0.79
CNKSR3-204ENST00000479339 WIPF1O43516 503 aa10.13□□□□□ -0.79
CNKSR3-204ENST00000479339 ADIPOQQ15848 244 aa10.13□□□□□ -0.79
CNKSR3-204ENST00000479339 LINC01587Q99440 93 aa10.13□□□□□ -0.79
CNKSR3-204ENST00000479339 ONECUT1Q9UBC0 465 aa10.13□□□□□ -0.79
CNKSR3-204ENST00000479339 C9JAW5 83 aa10.12□□□□□ -0.79
CNKSR3-204ENST00000479339 P0DMU3 169 aa10.12□□□□□ -0.79
CNKSR3-204ENST00000479339 FAM231AP0DMU4 169 aa10.12□□□□□ -0.79
CNKSR3-204ENST00000479339 FAM231CP0DMU5 169 aa10.12□□□□□ -0.79
CNKSR3-204ENST00000479339 RUSC1-AS1Q66K80 236 aa10.12□□□□□ -0.79
CNKSR3-204ENST00000479339 SFTA2Q6UW10 78 aa10.12□□□□□ -0.79
CNKSR3-204ENST00000479339 Q8N1Y9 231 aa10.12□□□□□ -0.79
CNKSR3-204ENST00000479339 MAPK1IP1LQ8NDC0 245 aa10.12□□□□□ -0.79
CNKSR3-204ENST00000479339 PRR25Q96S07 402 aa10.12□□□□□ -0.79
CNKSR3-204ENST00000479339 PRO1854Q9UHT4 67 aa10.12□□□□□ -0.79
CNKSR3-204ENST00000479339 FAM240AA0A1B0GVK7 77 aa10.12□□□□□ -0.79
CNKSR3-204ENST00000479339 INAFM1C9JVW0 142 aa10.12□□□□□ -0.79
CNKSR3-204ENST00000479339 MRPS12O15235 138 aaKnown RBP10.12□□□□□ -0.79
CNKSR3-204ENST00000479339 HES1Q14469 280 aa10.12□□□□□ -0.79
CNKSR3-204ENST00000479339 HCP5Q6MZN7 132 aa10.12□□□□□ -0.79
CNKSR3-204ENST00000479339 IL17RELQ6ZVW7 336 aa10.12□□□□□ -0.79
CNKSR3-204ENST00000479339 ASCL2Q99929 193 aa10.12□□□□□ -0.79
CNKSR3-204ENST00000479339 DSCAML1Q8TD84 2053 aa10.11□□□□□ -0.79
CNKSR3-204ENST00000479339 TRAV2A0A0B4J234 112 aa10.11□□□□□ -0.79
CNKSR3-204ENST00000479339 DUSP14O95147 198 aaKnown RBP10.11□□□□□ -0.79
CNKSR3-204ENST00000479339 RPL27AP46776 148 aaKnown RBP10.11□□□□□ -0.79
CNKSR3-204ENST00000479339 ORMDL2Q53FV1 153 aa10.11□□□□□ -0.79
CNKSR3-204ENST00000479339 NEXN-AS1Q8NBZ9 246 aa10.11□□□□□ -0.79
CNKSR3-204ENST00000479339 C10orf105Q8TEF2 133 aa10.11□□□□□ -0.79
CNKSR3-204ENST00000479339 PLCE1Q9P212 2302 aa10.11□□□□□ -0.79
CNKSR3-204ENST00000479339 TRBV7-7A0A0K0K1E9 115 aa10.11□□□□□ -0.79
CNKSR3-204ENST00000479339 C17orf77Q96MU5 243 aa10.11□□□□□ -0.79
CNKSR3-204ENST00000479339 CITED2Q99967 270 aaPredicted RBP10.11□□□□□ -0.79
CNKSR3-204ENST00000479339 FN1P02751 2386 aaKnown RBP10.1□□□□□ -0.79
CNKSR3-204ENST00000479339 M0R3E3 92 aa10.1□□□□□ -0.79
CNKSR3-204ENST00000479339 GAS8-AS1O95177 125 aa10.1□□□□□ -0.79
CNKSR3-204ENST00000479339 CFC1BP0CG36 223 aa10.1□□□□□ -0.79
CNKSR3-204ENST00000479339 CFC1P0CG37 223 aa10.1□□□□□ -0.79
CNKSR3-204ENST00000479339 HERVK_113P61574 105 aa10.1□□□□□ -0.79
CNKSR3-204ENST00000479339 ATXN8Q156A1 80 aa10.1□□□□□ -0.79
CNKSR3-204ENST00000479339 Q6ZQT7 251 aa10.1□□□□□ -0.79
CNKSR3-204ENST00000479339 C8orf31Q8N9H6 132 aa10.1□□□□□ -0.79
CNKSR3-204ENST00000479339 NTN5Q8WTR8 489 aaPredicted RBP10.1□□□□□ -0.79
CNKSR3-204ENST00000479339 PAPPA-AS1Q5QFB9 102 aa10.09□□□□□ -0.79
CNKSR3-204ENST00000479339 NRACQ8N912 160 aa10.09□□□□□ -0.79
CNKSR3-204ENST00000479339 TOMM6Q96B49 74 aa10.09□□□□□ -0.79
CNKSR3-204ENST00000479339 PLEKHB2Q96CS7 222 aa10.09□□□□□ -0.79
CNKSR3-204ENST00000479339 TIMD4Q96H15 378 aa10.09□□□□□ -0.79
CNKSR3-204ENST00000479339 MSRB1Q9NZV6 116 aa10.09□□□□□ -0.79
CNKSR3-204ENST00000479339 NIPBLQ6KC79 2804 aaeCLIP10.09□□□□□ -0.79
CNKSR3-204ENST00000479339 A0A0J9YY99 117 aa10.09□□□□□ -0.79
CNKSR3-204ENST00000479339 GAFA1Q96PS6 74 aa10.09□□□□□ -0.79
CNKSR3-204ENST00000479339 SCGB3A1Q96QR1 104 aa10.09□□□□□ -0.79
CNKSR3-204ENST00000479339 CR1P17927 2039 aa10.09□□□□□ -0.79
CNKSR3-204ENST00000479339 NSD1Q96L73 2696 aaPredicted RBP10.08□□□□□ -0.8
CNKSR3-204ENST00000479339 A0A1B0GX51 115 aa10.08□□□□□ -0.8
CNKSR3-204ENST00000479339 H3BMM0 161 aa10.08□□□□□ -0.8
CNKSR3-204ENST00000479339 M0R2P5 195 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 145.3 ms