RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 SCO2A0A1W2PP80 73 aa4.91□□□□□ -1.62
VCP-205ENST00000479300 A0A1W2PPV4 95 aa4.91□□□□□ -1.62
VCP-205ENST00000479300 SMIM27A0A1W2PRY6 76 aa4.91□□□□□ -1.62
VCP-205ENST00000479300 J3QR89 54 aa4.91□□□□□ -1.62
VCP-205ENST00000479300 K7EN84 100 aa4.91□□□□□ -1.62
VCP-205ENST00000479300 ISLRO14498 428 aa4.91□□□□□ -1.62
VCP-205ENST00000479300 HMGB3O15347 200 aaKnown RBP4.91□□□□□ -1.62
VCP-205ENST00000479300 IGKV1-5P01602 117 aa4.91□□□□□ -1.62
VCP-205ENST00000479300 OR5AL1P0C617 328 aa4.91□□□□□ -1.62
VCP-205ENST00000479300 HSD52Q0P140 79 aa4.91□□□□□ -1.62
VCP-205ENST00000479300 IZUMO4Q1ZYL8 232 aa4.91□□□□□ -1.62
VCP-205ENST00000479300 DEFB135Q30KP9 77 aa4.91□□□□□ -1.62
VCP-205ENST00000479300 FA2HQ7L5A8 372 aa4.91□□□□□ -1.62
VCP-205ENST00000479300 ATOH7Q8N100 152 aa4.91□□□□□ -1.62
VCP-205ENST00000479300 CHCHD1Q96BP2 118 aaKnown RBP4.91□□□□□ -1.62
VCP-205ENST00000479300 METTL26Q96S19 204 aa4.91□□□□□ -1.62
VCP-205ENST00000479300 ZNF331Q9NQX6 463 aaPredicted RBP4.91□□□□□ -1.62
VCP-205ENST00000479300 RABAC1Q9UI14 185 aa4.91□□□□□ -1.62
VCP-205ENST00000479300 WDR83OSQ9Y284 106 aa4.91□□□□□ -1.62
VCP-205ENST00000479300 KLK5Q9Y337 293 aaPredicted RBP4.91□□□□□ -1.62
VCP-205ENST00000479300 DNAH11Q96DT5 4516 aa4.91□□□□□ -1.62
VCP-205ENST00000479300 PKD1P98161 4303 aa4.9□□□□□ -1.62
VCP-205ENST00000479300 IGHV3OR16-13A0A075B7E8 117 aa4.9□□□□□ -1.63
VCP-205ENST00000479300 IGHV3-74A0A0B4J1X5 117 aa4.9□□□□□ -1.63
VCP-205ENST00000479300 FAM231BA6NCW3 169 aa4.9□□□□□ -1.63
VCP-205ENST00000479300 NUPR2A6NF83 97 aa4.9□□□□□ -1.63
VCP-205ENST00000479300 PGPEP1LA6NFU8 196 aa4.9□□□□□ -1.63
VCP-205ENST00000479300 INS-IGF2F8WCM5 200 aa4.9□□□□□ -1.63
VCP-205ENST00000479300 SLC17A3O00476 420 aa4.9□□□□□ -1.63
VCP-205ENST00000479300 P0C879 139 aa4.9□□□□□ -1.63
VCP-205ENST00000479300 RNASE2P10153 161 aaKnown RBP4.9□□□□□ -1.63
VCP-205ENST00000479300 COX8AP10176 69 aa4.9□□□□□ -1.63
VCP-205ENST00000479300 AZU1P20160 251 aa4.9□□□□□ -1.63
VCP-205ENST00000479300 PLP1P60201 277 aa4.9□□□□□ -1.63
VCP-205ENST00000479300 RAB31Q13636 194 aa4.9□□□□□ -1.63
VCP-205ENST00000479300 TMEM97Q5BJF2 176 aa4.9□□□□□ -1.63
VCP-205ENST00000479300 APRG1Q8IVJ8 170 aa4.9□□□□□ -1.63
VCP-205ENST00000479300 STHQ8IWL8 128 aa4.9□□□□□ -1.63
VCP-205ENST00000479300 FAM19A2Q8N3H0 131 aa4.9□□□□□ -1.63
VCP-205ENST00000479300 OR52E5Q8NH55 327 aa4.9□□□□□ -1.63
VCP-205ENST00000479300 RNF183Q96D59 192 aa4.9□□□□□ -1.63
VCP-205ENST00000479300 MRAP2Q96G30 205 aa4.9□□□□□ -1.63
VCP-205ENST00000479300 MAP6D1Q9H9H5 199 aa4.9□□□□□ -1.63
VCP-205ENST00000479300 NPVFQ9HCQ7 196 aa4.9□□□□□ -1.63
VCP-205ENST00000479300 CLEC5AQ9NY25 188 aa4.9□□□□□ -1.63
VCP-205ENST00000479300 TRAV2A0A0B4J234 112 aa4.89□□□□□ -1.63
VCP-205ENST00000479300 IGHV3-66A0A0C4DH42 116 aa4.89□□□□□ -1.63
VCP-205ENST00000479300 A0A1B0GVY2 172 aa4.89□□□□□ -1.63
VCP-205ENST00000479300 HELTA6NFD8 242 aa4.89□□□□□ -1.63
VCP-205ENST00000479300 SYS1-DBNDD2H3BUS1 97 aa4.89□□□□□ -1.63
VCP-205ENST00000479300 ARL14EPLP0DKL9 152 aa4.89□□□□□ -1.63
VCP-205ENST00000479300 GCHFRP30047 84 aa4.89□□□□□ -1.63
VCP-205ENST00000479300 GNG4P50150 75 aa4.89□□□□□ -1.63
VCP-205ENST00000479300 CKS1BP61024 79 aa4.89□□□□□ -1.63
VCP-205ENST00000479300 ODF3L2Q3SX64 289 aa4.89□□□□□ -1.63
VCP-205ENST00000479300 KIAA1644Q3SXP7 199 aa4.89□□□□□ -1.63
VCP-205ENST00000479300 TIGITQ495A1 244 aa4.89□□□□□ -1.63
VCP-205ENST00000479300 LGALS9CQ6DKI2 356 aa4.89□□□□□ -1.63
VCP-205ENST00000479300 FOXI2Q6ZQN5 318 aa4.89□□□□□ -1.63
VCP-205ENST00000479300 FAM231DQ6ZW35 169 aa4.89□□□□□ -1.63
VCP-205ENST00000479300 ERASQ7Z444 233 aa4.89□□□□□ -1.63
VCP-205ENST00000479300 ATP5L2Q7Z4Y8 100 aa4.89□□□□□ -1.63
VCP-205ENST00000479300 BPIFA4PQ86YQ2 179 aa4.89□□□□□ -1.63
VCP-205ENST00000479300 STXBP6Q8NFX7 210 aa4.89□□□□□ -1.63
VCP-205ENST00000479300 OR10AG1Q8NH19 301 aa4.89□□□□□ -1.63
VCP-205ENST00000479300 MUC4Q99102 2169 aa4.88□□□□□ -1.63
VCP-205ENST00000479300 A0A1W2PPM0 123 aa4.88□□□□□ -1.63
VCP-205ENST00000479300 SIVA1O15304 175 aa4.88□□□□□ -1.63
VCP-205ENST00000479300 CA1P00915 261 aaPredicted RBP4.88□□□□□ -1.63
VCP-205ENST00000479300 HIST1H1EP10412 219 aaKnown RBP4.88□□□□□ -1.63
VCP-205ENST00000479300 GATA2P23769 480 aaPredicted RBP4.88□□□□□ -1.63
VCP-205ENST00000479300 CRYBA4P53673 196 aa4.88□□□□□ -1.63
VCP-205ENST00000479300 ATP5IP56385 69 aaPredicted RBP4.88□□□□□ -1.63
VCP-205ENST00000479300 DEFB131AP59861 70 aa4.88□□□□□ -1.63
VCP-205ENST00000479300 C2orf83Q53S99 150 aa4.88□□□□□ -1.63
VCP-205ENST00000479300 CENPWQ5EE01 88 aa4.88□□□□□ -1.63
VCP-205ENST00000479300 RNASEKQ6P5S7 137 aaKnown RBP4.88□□□□□ -1.63
VCP-205ENST00000479300 C2orf91Q6ZV80 131 aa4.88□□□□□ -1.63
VCP-205ENST00000479300 S100A7AQ86SG5 101 aa4.88□□□□□ -1.63
VCP-205ENST00000479300 TMEM167BQ9NRX6 74 aa4.88□□□□□ -1.63
VCP-205ENST00000479300 HSPB8Q9UJY1 196 aa4.88□□□□□ -1.63
VCP-205ENST00000479300 YTHDF2Q9Y5A9 579 aaKnown RBP4.88□□□□□ -1.63
VCP-205ENST00000479300 TRAV26-1A0A087WT03 109 aa4.87□□□□□ -1.63
VCP-205ENST00000479300 GAGE12HA6NDE8 117 aa4.87□□□□□ -1.63
VCP-205ENST00000479300 H3BS24 57 aa4.87□□□□□ -1.63
VCP-205ENST00000479300 SNRPD3P62318 126 aaKnown RBP4.87□□□□□ -1.63
VCP-205ENST00000479300 SMAGPQ0VAQ4 97 aa4.87□□□□□ -1.63
VCP-205ENST00000479300 SLAQ13239 276 aa4.87□□□□□ -1.63
VCP-205ENST00000479300 MLANAQ16655 118 aa4.87□□□□□ -1.63
VCP-205ENST00000479300 IBA57Q5T440 356 aaKnown RBP4.87□□□□□ -1.63
VCP-205ENST00000479300 LINC01545Q5VT33 79 aa4.87□□□□□ -1.63
VCP-205ENST00000479300 MORN3Q6PF18 240 aaPredicted RBP4.87□□□□□ -1.63
VCP-205ENST00000479300 SPATA12Q7Z6I5 190 aa4.87□□□□□ -1.63
VCP-205ENST00000479300 NHLRC2Q8NBF2 726 aa4.87□□□□□ -1.63
VCP-205ENST00000479300 OR11H2Q8NH07 326 aa4.87□□□□□ -1.63
VCP-205ENST00000479300 C11orf45Q8TAV5 145 aa4.87□□□□□ -1.63
VCP-205ENST00000479300 PHLDA1Q8WV24 401 aaPredicted RBP4.87□□□□□ -1.63
VCP-205ENST00000479300 MAP1LC3CQ9BXW4 147 aa4.87□□□□□ -1.63
VCP-205ENST00000479300 FNDC4Q9H6D8 234 aaPredicted RBP4.87□□□□□ -1.63
VCP-205ENST00000479300 SPCS1Q9Y6A9 102 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms