RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 FHL2Q14192 279 aa10.79□□□□□ -0.68
C9orf3-217ENST00000479161 UQCC3Q6UW78 93 aa10.79□□□□□ -0.68
C9orf3-217ENST00000479161 VSIG2Q96IQ7 327 aa10.79□□□□□ -0.68
C9orf3-217ENST00000479161 B4DEV8 164 aa10.78□□□□□ -0.68
C9orf3-217ENST00000479161 ORM1P02763 201 aa10.78□□□□□ -0.68
C9orf3-217ENST00000479161 ASIPP42127 132 aa10.78□□□□□ -0.68
C9orf3-217ENST00000479161 CRYBA4P53673 196 aa10.78□□□□□ -0.68
C9orf3-217ENST00000479161 ZNF876PQ49A33 203 aa10.78□□□□□ -0.68
C9orf3-217ENST00000479161 ZNF575Q86XF7 245 aa10.78□□□□□ -0.68
C9orf3-217ENST00000479161 PCNPQ8WW12 178 aaKnown RBP10.78□□□□□ -0.68
C9orf3-217ENST00000479161 HHLA3Q9XRX5 114 aa10.78□□□□□ -0.68
C9orf3-217ENST00000479161 RAB19A4D1S5 217 aa10.77□□□□□ -0.69
C9orf3-217ENST00000479161 MED14OSP0DP75 135 aa10.77□□□□□ -0.69
C9orf3-217ENST00000479161 S100A4P26447 101 aaKnown RBP10.77□□□□□ -0.69
C9orf3-217ENST00000479161 CCL18P55774 89 aa10.77□□□□□ -0.69
C9orf3-217ENST00000479161 SCRT2Q9NQ03 307 aa10.77□□□□□ -0.69
C9orf3-217ENST00000479161 TMEM250H0YL14 139 aa10.76□□□□□ -0.69
C9orf3-217ENST00000479161 PAX4O43316 350 aa10.76□□□□□ -0.69
C9orf3-217ENST00000479161 NUDT3O95989 172 aa10.76□□□□□ -0.69
C9orf3-217ENST00000479161 OR4C5Q8NGB2 326 aa10.76□□□□□ -0.69
C9orf3-217ENST00000479161 BIN3Q9NQY0 253 aa10.76□□□□□ -0.69
C9orf3-217ENST00000479161 TRGV4A0A0C4DH28 118 aa10.75□□□□□ -0.69
C9orf3-217ENST00000479161 A8MWV9 139 aa10.75□□□□□ -0.69
C9orf3-217ENST00000479161 RS1O15537 224 aa10.75□□□□□ -0.69
C9orf3-217ENST00000479161 ZFP2Q6ZN57 461 aa10.75□□□□□ -0.69
C9orf3-217ENST00000479161 UBE2DNLQ8IWF7 75 aa10.75□□□□□ -0.69
C9orf3-217ENST00000479161 ZNF479Q96JC4 524 aa10.75□□□□□ -0.69
C9orf3-217ENST00000479161 UPK3BQ9BT76 320 aa10.75□□□□□ -0.69
C9orf3-217ENST00000479161 DERL1Q9BUN8 251 aa10.75□□□□□ -0.69
C9orf3-217ENST00000479161 A0A096LPF7 62 aa10.74□□□□□ -0.69
C9orf3-217ENST00000479161 A0A0J9YY99 117 aa10.74□□□□□ -0.69
C9orf3-217ENST00000479161 RBFOX3A6NFN3 312 aa10.74□□□□□ -0.69
C9orf3-217ENST00000479161 PGPEP1LA6NFU8 196 aa10.74□□□□□ -0.69
C9orf3-217ENST00000479161 IGLV2-8P01709 118 aa10.74□□□□□ -0.69
C9orf3-217ENST00000479161 MRPL23Q16540 153 aaKnown RBP10.74□□□□□ -0.69
C9orf3-217ENST00000479161 CENPWQ5EE01 88 aa10.74□□□□□ -0.69
C9orf3-217ENST00000479161 ZNF506Q5JVG8 444 aa10.74□□□□□ -0.69
C9orf3-217ENST00000479161 CFAP126Q5VTH2 177 aa10.74□□□□□ -0.69
C9orf3-217ENST00000479161 ICOSQ9Y6W8 199 aa10.74□□□□□ -0.69
C9orf3-217ENST00000479161 TRBV6-4A0A1B0GX49 114 aa10.73□□□□□ -0.69
C9orf3-217ENST00000479161 C9JCJ5 164 aa10.73□□□□□ -0.69
C9orf3-217ENST00000479161 IGHV3-53P01767 116 aa10.73□□□□□ -0.69
C9orf3-217ENST00000479161 ARMS2P0C7Q2 107 aa10.73□□□□□ -0.69
C9orf3-217ENST00000479161 GATA1P15976 413 aaPredicted RBP10.73□□□□□ -0.69
C9orf3-217ENST00000479161 GNG4P50150 75 aa10.73□□□□□ -0.69
C9orf3-217ENST00000479161 SH2D6Q7Z4S9 175 aa10.73□□□□□ -0.69
C9orf3-217ENST00000479161 SYT8Q8NBV8 401 aa10.73□□□□□ -0.69
C9orf3-217ENST00000479161 SSBP4Q9BWG4 385 aaPredicted RBP10.73□□□□□ -0.69
C9orf3-217ENST00000479161 M0R036 132 aa10.72□□□□□ -0.69
C9orf3-217ENST00000479161 SFTA3P0C7M3 94 aa10.72□□□□□ -0.69
C9orf3-217ENST00000479161 NHLRC2Q8NBF2 726 aa10.72□□□□□ -0.69
C9orf3-217ENST00000479161 ZNRF2Q8NHG8 242 aa10.72□□□□□ -0.69
C9orf3-217ENST00000479161 LINC00588Q9Y4M8 146 aa10.72□□□□□ -0.69
C9orf3-217ENST00000479161 TRBV20OR9-2A0A075B6H5 130 aa10.71□□□□□ -0.69
C9orf3-217ENST00000479161 C19orf71A6NCJ1 209 aa10.71□□□□□ -0.69
C9orf3-217ENST00000479161 OR5AL1P0C617 328 aa10.71□□□□□ -0.69
C9orf3-217ENST00000479161 MGST1P10620 155 aaKnown RBP10.71□□□□□ -0.69
C9orf3-217ENST00000479161 Q6ZR54 194 aa10.71□□□□□ -0.69
C9orf3-217ENST00000479161 TMA7Q9Y2S6 64 aaKnown RBP10.71□□□□□ -0.69
C9orf3-217ENST00000479161 MRPS16Q9Y3D3 137 aaKnown RBP10.71□□□□□ -0.69
C9orf3-217ENST00000479161 PHLDA3Q9Y5J5 127 aa10.71□□□□□ -0.69
C9orf3-217ENST00000479161 H3BVH4 76 aa10.7□□□□□ -0.7
C9orf3-217ENST00000479161 RHODO00212 210 aa10.7□□□□□ -0.7
C9orf3-217ENST00000479161 SNAI2O43623 268 aa10.7□□□□□ -0.7
C9orf3-217ENST00000479161 NXPH4O95158 308 aa10.7□□□□□ -0.7
C9orf3-217ENST00000479161 RPS20P60866 119 aaKnown RBP10.7□□□□□ -0.7
C9orf3-217ENST00000479161 ESRGQ1W209 222 aa10.7□□□□□ -0.7
C9orf3-217ENST00000479161 DMRTA1Q5VZB9 504 aa10.7□□□□□ -0.7
C9orf3-217ENST00000479161 NEGR1Q7Z3B1 354 aa10.7□□□□□ -0.7
C9orf3-217ENST00000479161 ZFP82Q8N141 532 aa10.7□□□□□ -0.7
C9orf3-217ENST00000479161 DNAH10Q8IVF4 4471 aa10.7□□□□□ -0.7
C9orf3-217ENST00000479161 K7EQD1 137 aa10.69□□□□□ -0.7
C9orf3-217ENST00000479161 BTF3P20290 206 aaKnown RBP10.69□□□□□ -0.7
C9orf3-217ENST00000479161 TIRAPP58753 221 aa10.69□□□□□ -0.7
C9orf3-217ENST00000479161 UFSP1Q6NVU6 142 aa10.69□□□□□ -0.7
C9orf3-217ENST00000479161 DAZAP1Q96EP5 407 aaKnown RBP10.69□□□□□ -0.7
C9orf3-217ENST00000479161 SFRP2Q96HF1 295 aa10.69□□□□□ -0.7
C9orf3-217ENST00000479161 PARLQ9H300 379 aa10.69□□□□□ -0.7
C9orf3-217ENST00000479161 SMDT1Q9H4I9 107 aa10.69□□□□□ -0.7
C9orf3-217ENST00000479161 LY96Q9Y6Y9 160 aa10.69□□□□□ -0.7
C9orf3-217ENST00000479161 XKRY2A2RUG3 117 aa10.68□□□□□ -0.7
C9orf3-217ENST00000479161 GRIFINA4D1Z8 144 aa10.68□□□□□ -0.7
C9orf3-217ENST00000479161 RHOHQ15669 191 aa10.68□□□□□ -0.7
C9orf3-217ENST00000479161 PRR27Q6MZM9 219 aa10.68□□□□□ -0.7
C9orf3-217ENST00000479161 SLC25A29Q8N8R3 303 aa10.68□□□□□ -0.7
C9orf3-217ENST00000479161 PRADC1Q9BSG0 188 aa10.68□□□□□ -0.7
C9orf3-217ENST00000479161 A0A1W2PPQ1 181 aa10.67□□□□□ -0.7
C9orf3-217ENST00000479161 SCO1O75880 301 aa10.67□□□□□ -0.7
C9orf3-217ENST00000479161 GYPEP15421 78 aa10.67□□□□□ -0.7
C9orf3-217ENST00000479161 SRIP30626 198 aa10.67□□□□□ -0.7
C9orf3-217ENST00000479161 EIF5A2Q9GZV4 153 aaKnown RBP10.67□□□□□ -0.7
C9orf3-217ENST00000479161 Q9H8V8 135 aa10.67□□□□□ -0.7
C9orf3-217ENST00000479161 TMSB15BA0A087X1C1 80 aa10.66□□□□□ -0.7
C9orf3-217ENST00000479161 K7EP13 123 aa10.66□□□□□ -0.7
C9orf3-217ENST00000479161 P01737 135 aa10.66□□□□□ -0.7
C9orf3-217ENST00000479161 RPL19P84098 196 aaKnown RBP10.66□□□□□ -0.7
C9orf3-217ENST00000479161 C10orf91Q5T1B1 145 aa10.66□□□□□ -0.7
C9orf3-217ENST00000479161 LYPD5Q6UWN5 251 aa10.66□□□□□ -0.7
C9orf3-217ENST00000479161 LINC00336Q6ZUF6 198 aa10.66□□□□□ -0.7
C9orf3-217ENST00000479161 OCC1Q8TAD7 63 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms