RNA–Protein interactions for RNA: ENST00000478776.1

VLDLR-204, Transcript of very low density lipoprotein receptor, humanhuman

TSL 3

Gene VLDLR, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-204ENST00000478776 CXorf51AA0A1B0GTR3 108 aa0.94□□□□□ -2.26
VLDLR-204ENST00000478776 M0R129 80 aa0.94□□□□□ -2.26
VLDLR-204ENST00000478776 PITX3O75364 302 aa0.94□□□□□ -2.26
VLDLR-204ENST00000478776 FXYD4P59646 89 aa0.94□□□□□ -2.26
VLDLR-204ENST00000478776 RRAS2P62070 204 aaPredicted RBP0.94□□□□□ -2.26
VLDLR-204ENST00000478776 EMX2Q04743 252 aa0.94□□□□□ -2.26
VLDLR-204ENST00000478776 LINC01545Q5VT33 79 aa0.94□□□□□ -2.26
VLDLR-204ENST00000478776 LINC00575Q6W349 94 aa0.94□□□□□ -2.26
VLDLR-204ENST00000478776 Q6ZUT4 128 aa0.94□□□□□ -2.26
VLDLR-204ENST00000478776 DEFB132Q7Z7B7 95 aa0.94□□□□□ -2.26
VLDLR-204ENST00000478776 VSTM2AQ8TAG5 236 aa0.94□□□□□ -2.26
VLDLR-204ENST00000478776 ATG5Q9H1Y0 275 aa0.94□□□□□ -2.26
VLDLR-204ENST00000478776 PEG3Q9GZU2 1588 aa0.94□□□□□ -2.26
VLDLR-204ENST00000478776 PHLPP1O60346 1717 aa0.94□□□□□ -2.26
VLDLR-204ENST00000478776 ZGRF1Q86YA3 2104 aa0.94□□□□□ -2.26
VLDLR-204ENST00000478776 NCOA3Q9Y6Q9 1424 aa0.93□□□□□ -2.26
VLDLR-204ENST00000478776 TRAV17A0A0B4J275 112 aa0.93□□□□□ -2.26
VLDLR-204ENST00000478776 HIGD1CA8MV81 97 aa0.93□□□□□ -2.26
VLDLR-204ENST00000478776 CCDC179H3BU77 68 aa0.93□□□□□ -2.26
VLDLR-204ENST00000478776 EFNA4P52798 201 aa0.93□□□□□ -2.26
VLDLR-204ENST00000478776 MIC13Q5XKP0 118 aa0.93□□□□□ -2.26
VLDLR-204ENST00000478776 NDUFA11Q86Y39 141 aa0.93□□□□□ -2.26
VLDLR-204ENST00000478776 PSMG3Q9BT73 122 aaPredicted RBP0.93□□□□□ -2.26
VLDLR-204ENST00000478776 KIF13AQ9H1H9 1805 aa0.93□□□□□ -2.26
VLDLR-204ENST00000478776 NCOA6Q14686 2063 aaPredicted RBP0.93□□□□□ -2.26
VLDLR-204ENST00000478776 ATG2AQ2TAZ0 1938 aa0.93□□□□□ -2.26
VLDLR-204ENST00000478776 AKAP11Q9UKA4 1901 aa0.93□□□□□ -2.26
VLDLR-204ENST00000478776 BCL9LQ86UU0 1499 aa0.92□□□□□ -2.26
VLDLR-204ENST00000478776 CDK12Q9NYV4 1490 aaPredicted RBP0.92□□□□□ -2.26
VLDLR-204ENST00000478776 FOCADQ5VW36 1801 aa0.92□□□□□ -2.26
VLDLR-204ENST00000478776 TRAV12-2A0A075B6T6 113 aa0.92□□□□□ -2.26
VLDLR-204ENST00000478776 GNG7O60262 68 aa0.92□□□□□ -2.26
VLDLR-204ENST00000478776 KRTAP10-4P60372 401 aaPredicted RBP0.92□□□□□ -2.26
VLDLR-204ENST00000478776 XAF1Q6GPH4 301 aa0.92□□□□□ -2.26
VLDLR-204ENST00000478776 Q6ZQY7 126 aa0.92□□□□□ -2.26
VLDLR-204ENST00000478776 KCNRGQ8N5I3 272 aa0.92□□□□□ -2.26
VLDLR-204ENST00000478776 IBTKQ9P2D0 1353 aaPredicted RBP0.92□□□□□ -2.26
VLDLR-204ENST00000478776 PTPRMP28827 1452 aa0.92□□□□□ -2.26
VLDLR-204ENST00000478776 DLEC1Q9Y238 1755 aa0.91□□□□□ -2.26
VLDLR-204ENST00000478776 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.91□□□□□ -2.26
VLDLR-204ENST00000478776 NBDYA0A0U1RRE5 68 aa0.91□□□□□ -2.26
VLDLR-204ENST00000478776 FAM92AA1XBS5 289 aa0.91□□□□□ -2.26
VLDLR-204ENST00000478776 FAM25AB3EWG3 89 aa0.91□□□□□ -2.26
VLDLR-204ENST00000478776 FAM25CB3EWG5 89 aa0.91□□□□□ -2.26
VLDLR-204ENST00000478776 FAM25GB3EWG6 89 aa0.91□□□□□ -2.26
VLDLR-204ENST00000478776 SLC25A6P12236 298 aa0.91□□□□□ -2.26
VLDLR-204ENST00000478776 SPCS2Q15005 226 aa0.91□□□□□ -2.26
VLDLR-204ENST00000478776 IQCJQ1A5X6 159 aa0.91□□□□□ -2.26
VLDLR-204ENST00000478776 SPANXN1Q5VSR9 72 aa0.91□□□□□ -2.26
VLDLR-204ENST00000478776 KRTAP5-10Q6L8G5 202 aa0.91□□□□□ -2.26
VLDLR-204ENST00000478776 DPH3Q96FX2 82 aa0.91□□□□□ -2.26
VLDLR-204ENST00000478776 WDR7Q9Y4E6 1490 aa0.91□□□□□ -2.26
VLDLR-204ENST00000478776 ZNF142P52746 1687 aaPredicted RBP0.91□□□□□ -2.26
VLDLR-204ENST00000478776 MYH7P12883 1935 aa0.9□□□□□ -2.27
VLDLR-204ENST00000478776 SNRNP200O75643 2136 aaKnown RBP0.9□□□□□ -2.27
VLDLR-204ENST00000478776 APODP05090 189 aa0.9□□□□□ -2.27
VLDLR-204ENST00000478776 CCKP06307 115 aa0.9□□□□□ -2.27
VLDLR-204ENST00000478776 FXYD3Q14802 87 aa0.9□□□□□ -2.27
VLDLR-204ENST00000478776 OR2T2Q6IF00 324 aa0.9□□□□□ -2.27
VLDLR-204ENST00000478776 CCL19Q99731 98 aa0.9□□□□□ -2.27
VLDLR-204ENST00000478776 NDUFA12Q9UI09 145 aa0.9□□□□□ -2.27
VLDLR-204ENST00000478776 LAMB1P07942 1786 aa0.9□□□□□ -2.27
VLDLR-204ENST00000478776 NALCNQ8IZF0 1738 aa0.89□□□□□ -2.27
VLDLR-204ENST00000478776 CITO14578 2027 aa0.89□□□□□ -2.27
VLDLR-204ENST00000478776 RREB1Q92766 1687 aa0.89□□□□□ -2.27
VLDLR-204ENST00000478776 ROCK2O75116 1388 aaKnown RBP0.89□□□□□ -2.27
VLDLR-204ENST00000478776 TRBV30A0A0K0K1B3 111 aa0.89□□□□□ -2.27
VLDLR-204ENST00000478776 TEX49A0A1B0GTD5 131 aa0.89□□□□□ -2.27
VLDLR-204ENST00000478776 LOC101927531A0A1B0GV80 90 aa0.89□□□□□ -2.27
VLDLR-204ENST00000478776 A0A1B0GV90 55 aa0.89□□□□□ -2.27
VLDLR-204ENST00000478776 DLEU1O43261 78 aa0.89□□□□□ -2.27
VLDLR-204ENST00000478776 APOC1P02654 83 aa0.89□□□□□ -2.27
VLDLR-204ENST00000478776 PIRTP0C851 137 aa0.89□□□□□ -2.27
VLDLR-204ENST00000478776 PRB4P10163 310 aaPredicted RBP0.89□□□□□ -2.27
VLDLR-204ENST00000478776 CAV3P56539 151 aa0.89□□□□□ -2.27
VLDLR-204ENST00000478776 C5orf56Q8N8D9 126 aa0.89□□□□□ -2.27
VLDLR-204ENST00000478776 COPS9Q8WXC6 57 aa0.89□□□□□ -2.27
VLDLR-204ENST00000478776 SNRNP25Q9BV90 132 aaKnown RBP0.89□□□□□ -2.27
VLDLR-204ENST00000478776 TMEM242Q9NWH2 141 aa0.89□□□□□ -2.27
VLDLR-204ENST00000478776 SPEF2Q9C093 1822 aa0.89□□□□□ -2.27
VLDLR-204ENST00000478776 BLMP54132 1417 aaPredicted RBP0.89□□□□□ -2.27
VLDLR-204ENST00000478776 NAIPQ13075 1403 aa0.89□□□□□ -2.27
VLDLR-204ENST00000478776 MYH9P35579 1960 aaKnown RBP0.88□□□□□ -2.27
VLDLR-204ENST00000478776 MBD5Q9P267 1494 aa0.88□□□□□ -2.27
VLDLR-204ENST00000478776 IL5P05113 134 aa0.88□□□□□ -2.27
VLDLR-204ENST00000478776 PIPP12273 146 aaPredicted RBP0.88□□□□□ -2.27
VLDLR-204ENST00000478776 FGF7P21781 194 aa0.88□□□□□ -2.27
VLDLR-204ENST00000478776 BTG2P78543 158 aa0.88□□□□□ -2.27
VLDLR-204ENST00000478776 C10orf99Q6UWK7 81 aa0.88□□□□□ -2.27
VLDLR-204ENST00000478776 Q6ZS92 163 aa0.88□□□□□ -2.27
VLDLR-204ENST00000478776 SPTSSAQ969W0 71 aa0.88□□□□□ -2.27
VLDLR-204ENST00000478776 PDCD10Q9BUL8 212 aa0.88□□□□□ -2.27
VLDLR-204ENST00000478776 DAPK1P53355 1430 aa0.88□□□□□ -2.27
VLDLR-204ENST00000478776 ASCC3Q8N3C0 2202 aaKnown RBP0.88□□□□□ -2.27
VLDLR-204ENST00000478776 AFDNP55196 1824 aaKnown RBP0.87□□□□□ -2.27
VLDLR-204ENST00000478776 CFTRP13569 1480 aa0.87□□□□□ -2.27
VLDLR-204ENST00000478776 A0A1W2PPM0 123 aa0.87□□□□□ -2.27
VLDLR-204ENST00000478776 NDUFB6O95139 128 aa0.87□□□□□ -2.27
VLDLR-204ENST00000478776 TFF1P04155 84 aa0.87□□□□□ -2.27
VLDLR-204ENST00000478776 MEIG1Q5JSS6 88 aa0.87□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms