RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 GPR31O00270 319 aa2.2□□□□□ -2.06
CDC42BPA-212ENST00000478573 OVOL1O14753 267 aa2.2□□□□□ -2.06
CDC42BPA-212ENST00000478573 OR7C2O60412 319 aa2.2□□□□□ -2.06
CDC42BPA-212ENST00000478573 DEDDO75618 318 aa2.2□□□□□ -2.06
CDC42BPA-212ENST00000478573 CDS2O95674 445 aa2.2□□□□□ -2.06
CDC42BPA-212ENST00000478573 HRASP01112 189 aa2.2□□□□□ -2.06
CDC42BPA-212ENST00000478573 PPYP01298 95 aa2.2□□□□□ -2.06
CDC42BPA-212ENST00000478573 IGKV1-16P04430 117 aa2.2□□□□□ -2.06
CDC42BPA-212ENST00000478573 CTSDP07339 412 aaPredicted RBP2.2□□□□□ -2.06
CDC42BPA-212ENST00000478573 SAA1P0DJI8 122 aaPredicted RBP2.2□□□□□ -2.06
CDC42BPA-212ENST00000478573 SLC25A6P12236 298 aa2.2□□□□□ -2.06
CDC42BPA-212ENST00000478573 ADCYAP1P18509 176 aa2.2□□□□□ -2.06
CDC42BPA-212ENST00000478573 NTF3P20783 257 aa2.2□□□□□ -2.06
CDC42BPA-212ENST00000478573 SNCAP37840 140 aa2.2□□□□□ -2.06
CDC42BPA-212ENST00000478573 AKR1D1P51857 326 aa2.2□□□□□ -2.06
CDC42BPA-212ENST00000478573 TPPP2P59282 170 aa2.2□□□□□ -2.06
CDC42BPA-212ENST00000478573 BAXQ07812 192 aa2.2□□□□□ -2.06
CDC42BPA-212ENST00000478573 PPP1R1AQ13522 171 aa2.2□□□□□ -2.06
CDC42BPA-212ENST00000478573 LUZP6Q538Z0 58 aa2.2□□□□□ -2.06
CDC42BPA-212ENST00000478573 TTC32Q5I0X7 151 aa2.2□□□□□ -2.06
CDC42BPA-212ENST00000478573 MORN3Q6PF18 240 aaPredicted RBP2.2□□□□□ -2.06
CDC42BPA-212ENST00000478573 UNQ5815/PRO19632Q6UWF5 114 aa2.2□□□□□ -2.06
CDC42BPA-212ENST00000478573 TMED4Q7Z7H5 227 aa2.2□□□□□ -2.06
CDC42BPA-212ENST00000478573 FAM223AQ8IWN6 122 aa2.2□□□□□ -2.06
CDC42BPA-212ENST00000478573 ORMDL3Q8N138 153 aa2.2□□□□□ -2.06
CDC42BPA-212ENST00000478573 OR2K2Q8NGT1 345 aa2.2□□□□□ -2.06
CDC42BPA-212ENST00000478573 OR4A5Q8NH83 315 aa2.2□□□□□ -2.06
CDC42BPA-212ENST00000478573 RNASE11Q8TAA1 199 aaKnown RBP2.2□□□□□ -2.06
CDC42BPA-212ENST00000478573 TMEM167AQ8TBQ9 72 aa2.2□□□□□ -2.06
CDC42BPA-212ENST00000478573 GNPNAT1Q96EK6 184 aaPredicted RBP2.2□□□□□ -2.06
CDC42BPA-212ENST00000478573 USMG5Q96IX5 58 aa2.2□□□□□ -2.06
CDC42BPA-212ENST00000478573 PACRGQ96M98 296 aaPredicted RBP2.2□□□□□ -2.06
CDC42BPA-212ENST00000478573 YPEL4Q96NS1 127 aa2.2□□□□□ -2.06
CDC42BPA-212ENST00000478573 B9D2Q9BPU9 175 aa2.2□□□□□ -2.06
CDC42BPA-212ENST00000478573 SCRT1Q9BWW7 348 aa2.2□□□□□ -2.06
CDC42BPA-212ENST00000478573 PARD6GQ9BYG4 376 aaPredicted RBP2.2□□□□□ -2.06
CDC42BPA-212ENST00000478573 SLC35B3Q9H1N7 401 aa2.2□□□□□ -2.06
CDC42BPA-212ENST00000478573 TREM1Q9NP99 234 aa2.2□□□□□ -2.06
CDC42BPA-212ENST00000478573 CACFD1Q9UGQ2 172 aa2.2□□□□□ -2.06
CDC42BPA-212ENST00000478573 LINC00527Q9UJ94 153 aa2.2□□□□□ -2.06
CDC42BPA-212ENST00000478573 RBM7Q9Y580 266 aaKnown RBP2.2□□□□□ -2.06
CDC42BPA-212ENST00000478573 TRBV24-1A0A075B6N3 115 aa2.19□□□□□ -2.06
CDC42BPA-212ENST00000478573 IGHV3OR16-8A0A075B7F1 116 aa2.19□□□□□ -2.06
CDC42BPA-212ENST00000478573 C7orf77A4D0Y5 90 aa2.19□□□□□ -2.06
CDC42BPA-212ENST00000478573 CRYM-AS1A6NIL9 109 aa2.19□□□□□ -2.06
CDC42BPA-212ENST00000478573 A8MWL6 223 aa2.19□□□□□ -2.06
CDC42BPA-212ENST00000478573 A8MWP6 167 aa2.19□□□□□ -2.06
CDC42BPA-212ENST00000478573 G3V318 75 aa2.19□□□□□ -2.06
CDC42BPA-212ENST00000478573 TSTD3H0UI37 97 aa2.19□□□□□ -2.06
CDC42BPA-212ENST00000478573 K7EPK0 472 aa2.19□□□□□ -2.06
CDC42BPA-212ENST00000478573 CYB5BO43169 146 aa2.19□□□□□ -2.06
CDC42BPA-212ENST00000478573 GGCTO75223 188 aaKnown RBP2.19□□□□□ -2.06
CDC42BPA-212ENST00000478573 SIX6O95475 246 aa2.19□□□□□ -2.06
CDC42BPA-212ENST00000478573 TRGV3P03979 118 aa2.19□□□□□ -2.06
CDC42BPA-212ENST00000478573 OR5AC1P0C628 307 aa2.19□□□□□ -2.06
CDC42BPA-212ENST00000478573 SFTA3P0C7M3 94 aa2.19□□□□□ -2.06
CDC42BPA-212ENST00000478573 PTHLHP12272 177 aa2.19□□□□□ -2.06
CDC42BPA-212ENST00000478573 NQO2P16083 231 aa2.19□□□□□ -2.06
CDC42BPA-212ENST00000478573 S100A2P29034 98 aa2.19□□□□□ -2.06
CDC42BPA-212ENST00000478573 S100GP29377 79 aa2.19□□□□□ -2.06
CDC42BPA-212ENST00000478573 RPL12P30050 165 aaKnown RBP2.19□□□□□ -2.06
CDC42BPA-212ENST00000478573 RPL35P42766 123 aaKnown RBP2.19□□□□□ -2.06
CDC42BPA-212ENST00000478573 RPL27AP46776 148 aaKnown RBP2.19□□□□□ -2.06
CDC42BPA-212ENST00000478573 PSMB2P49721 201 aa2.19□□□□□ -2.06
CDC42BPA-212ENST00000478573 PKIAP61925 76 aa2.19□□□□□ -2.06
CDC42BPA-212ENST00000478573 FXYD3Q14802 87 aa2.19□□□□□ -2.06
CDC42BPA-212ENST00000478573 TNXAQ16473 311 aa2.19□□□□□ -2.06
CDC42BPA-212ENST00000478573 DEFB136Q30KP8 78 aa2.19□□□□□ -2.06
CDC42BPA-212ENST00000478573 KHDC3LQ587J8 217 aa2.19□□□□□ -2.06
CDC42BPA-212ENST00000478573 SGPP2Q8IWX5 399 aa2.19□□□□□ -2.06
CDC42BPA-212ENST00000478573 OR11H1Q8NG94 326 aa2.19□□□□□ -2.06
CDC42BPA-212ENST00000478573 OR5H2Q8NGV7 314 aa2.19□□□□□ -2.06
CDC42BPA-212ENST00000478573 MAFIPQ8WZ33 124 aa2.19□□□□□ -2.06
CDC42BPA-212ENST00000478573 IMMP2LQ96T52 175 aa2.19□□□□□ -2.06
CDC42BPA-212ENST00000478573 TXNDC17Q9BRA2 123 aa2.19□□□□□ -2.06
CDC42BPA-212ENST00000478573 C2orf88Q9BSF0 95 aa2.19□□□□□ -2.06
CDC42BPA-212ENST00000478573 SLC25A31Q9H0C2 315 aa2.19□□□□□ -2.06
CDC42BPA-212ENST00000478573 NIT2Q9NQR4 276 aa2.19□□□□□ -2.06
CDC42BPA-212ENST00000478573 OR5AC2Q9NZP5 309 aa2.19□□□□□ -2.06
CDC42BPA-212ENST00000478573 ZNF230Q9UIE0 474 aaPredicted RBP2.19□□□□□ -2.06
CDC42BPA-212ENST00000478573 C14orf166Q9Y224 244 aaKnown RBP2.19□□□□□ -2.06
CDC42BPA-212ENST00000478573 LYSTQ99698 3801 aa2.19□□□□□ -2.06
CDC42BPA-212ENST00000478573 TRAV9-1A0A075B6T8 112 aa2.18□□□□□ -2.06
CDC42BPA-212ENST00000478573 LINC00587B1AMM8 73 aa2.18□□□□□ -2.06
CDC42BPA-212ENST00000478573 PPP5D1E7EU14 171 aa2.18□□□□□ -2.06
CDC42BPA-212ENST00000478573 TMEM250H0YL14 139 aa2.18□□□□□ -2.06
CDC42BPA-212ENST00000478573 K7EN84 100 aa2.18□□□□□ -2.06
CDC42BPA-212ENST00000478573 LGALS9O00182 355 aa2.18□□□□□ -2.06
CDC42BPA-212ENST00000478573 NDUFS5O43920 106 aa2.18□□□□□ -2.06
CDC42BPA-212ENST00000478573 PITX3O75364 302 aa2.18□□□□□ -2.06
CDC42BPA-212ENST00000478573 ADAP1O75689 374 aa2.18□□□□□ -2.06
CDC42BPA-212ENST00000478573 CNIH1O95406 144 aa2.18□□□□□ -2.06
CDC42BPA-212ENST00000478573 IGLV1-51P01701 117 aa2.18□□□□□ -2.06
CDC42BPA-212ENST00000478573 FGF7P21781 194 aa2.18□□□□□ -2.06
CDC42BPA-212ENST00000478573 LPAR6P43657 344 aa2.18□□□□□ -2.06
CDC42BPA-212ENST00000478573 SULT1A1P50225 295 aa2.18□□□□□ -2.06
CDC42BPA-212ENST00000478573 TAS2R30P59541 319 aa2.18□□□□□ -2.06
CDC42BPA-212ENST00000478573 SPCS3P61009 180 aa2.18□□□□□ -2.06
CDC42BPA-212ENST00000478573 RPL30P62888 115 aaKnown RBP2.18□□□□□ -2.06
CDC42BPA-212ENST00000478573 SUPT4H1P63272 117 aaKnown RBP2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms