RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 PCNPQ8WW12 178 aaKnown RBP4.86□□□□□ -1.63
BRCA1-215ENST00000478531 TMSB15BA0A087X1C1 80 aa4.85□□□□□ -1.63
BRCA1-215ENST00000478531 A0A0J9YY99 117 aa4.85□□□□□ -1.63
BRCA1-215ENST00000478531 TRBV6-1A0A0K0K1D8 114 aa4.85□□□□□ -1.63
BRCA1-215ENST00000478531 B4DEV8 164 aa4.85□□□□□ -1.63
BRCA1-215ENST00000478531 PDE6DO43924 150 aa4.85□□□□□ -1.63
BRCA1-215ENST00000478531 S100A4P26447 101 aaKnown RBP4.85□□□□□ -1.63
BRCA1-215ENST00000478531 CENPWQ5EE01 88 aa4.85□□□□□ -1.63
BRCA1-215ENST00000478531 BAGE2Q86Y30 109 aa4.85□□□□□ -1.63
BRCA1-215ENST00000478531 C11orf52Q96A22 123 aa4.85□□□□□ -1.63
BRCA1-215ENST00000478531 TXNDC17Q9BRA2 123 aa4.85□□□□□ -1.63
BRCA1-215ENST00000478531 MED9Q9NWA0 146 aa4.85□□□□□ -1.63
BRCA1-215ENST00000478531 VAX2Q9UIW0 290 aa4.85□□□□□ -1.63
BRCA1-215ENST00000478531 TRAV26-1A0A087WT03 109 aa4.85□□□□□ -1.63
BRCA1-215ENST00000478531 C9JCJ5 164 aa4.85□□□□□ -1.63
BRCA1-215ENST00000478531 NUDT3O95989 172 aa4.85□□□□□ -1.63
BRCA1-215ENST00000478531 SFTA3P0C7M3 94 aa4.85□□□□□ -1.63
BRCA1-215ENST00000478531 MGST1P10620 155 aaKnown RBP4.85□□□□□ -1.63
BRCA1-215ENST00000478531 HOXA5P20719 270 aa4.85□□□□□ -1.63
BRCA1-215ENST00000478531 ASIPP42127 132 aa4.85□□□□□ -1.63
BRCA1-215ENST00000478531 CRIP1P50238 77 aa4.85□□□□□ -1.63
BRCA1-215ENST00000478531 CEBPGP53567 150 aa4.85□□□□□ -1.63
BRCA1-215ENST00000478531 TCTAP57738 103 aa4.85□□□□□ -1.63
BRCA1-215ENST00000478531 LGALS9BQ3B8N2 356 aa4.85□□□□□ -1.63
BRCA1-215ENST00000478531 TOR2AQ5JU69 321 aa4.85□□□□□ -1.63
BRCA1-215ENST00000478531 IGKV3D-20A0A0C4DH25 116 aa4.84□□□□□ -1.63
BRCA1-215ENST00000478531 RAB19A4D1S5 217 aa4.84□□□□□ -1.63
BRCA1-215ENST00000478531 GRIFINA4D1Z8 144 aa4.84□□□□□ -1.63
BRCA1-215ENST00000478531 RBFOX3A6NFN3 312 aa4.84□□□□□ -1.63
BRCA1-215ENST00000478531 H3BVH4 76 aa4.84□□□□□ -1.63
BRCA1-215ENST00000478531 M0R2P5 195 aa4.84□□□□□ -1.63
BRCA1-215ENST00000478531 GNG4P50150 75 aa4.84□□□□□ -1.63
BRCA1-215ENST00000478531 LCE2CQ5TA81 110 aa4.84□□□□□ -1.63
BRCA1-215ENST00000478531 TEX261Q6UWH6 196 aa4.84□□□□□ -1.63
BRCA1-215ENST00000478531 FAM210BQ96KR6 192 aa4.84□□□□□ -1.63
BRCA1-215ENST00000478531 EIF5A2Q9GZV4 153 aaKnown RBP4.84□□□□□ -1.63
BRCA1-215ENST00000478531 KRBOX1C9JBD0 128 aa4.84□□□□□ -1.64
BRCA1-215ENST00000478531 GATCO43716 136 aaKnown RBP4.84□□□□□ -1.64
BRCA1-215ENST00000478531 RNASE3P12724 160 aaKnown RBP4.84□□□□□ -1.64
BRCA1-215ENST00000478531 RPL19P84098 196 aaKnown RBP4.84□□□□□ -1.64
BRCA1-215ENST00000478531 ZNF876PQ49A33 203 aa4.84□□□□□ -1.64
BRCA1-215ENST00000478531 LGALS9CQ6DKI2 356 aa4.84□□□□□ -1.64
BRCA1-215ENST00000478531 COX8CQ7Z4L0 72 aa4.84□□□□□ -1.64
BRCA1-215ENST00000478531 UBE2DNLQ8IWF7 75 aa4.84□□□□□ -1.64
BRCA1-215ENST00000478531 C15orf53Q8NAA6 179 aa4.84□□□□□ -1.64
BRCA1-215ENST00000478531 LYPD6BQ8NI32 183 aa4.84□□□□□ -1.64
BRCA1-215ENST00000478531 C9orf85Q96MD7 179 aa4.84□□□□□ -1.64
BRCA1-215ENST00000478531 MLST8Q9BVC4 326 aa4.84□□□□□ -1.64
BRCA1-215ENST00000478531 TPPP3Q9BW30 176 aa4.84□□□□□ -1.64
BRCA1-215ENST00000478531 TRBV20OR9-2A0A075B6H5 130 aa4.83□□□□□ -1.64
BRCA1-215ENST00000478531 TRGV4A0A0C4DH28 118 aa4.83□□□□□ -1.64
BRCA1-215ENST00000478531 P0DMU3 169 aa4.83□□□□□ -1.64
BRCA1-215ENST00000478531 FAM231AP0DMU4 169 aa4.83□□□□□ -1.64
BRCA1-215ENST00000478531 FAM231CP0DMU5 169 aa4.83□□□□□ -1.64
BRCA1-215ENST00000478531 ZNF506Q5JVG8 444 aa4.83□□□□□ -1.64
BRCA1-215ENST00000478531 OR4C5Q8NGB2 326 aa4.83□□□□□ -1.64
BRCA1-215ENST00000478531 RASL10AQ92737 203 aa4.83□□□□□ -1.64
BRCA1-215ENST00000478531 ZNF479Q96JC4 524 aa4.83□□□□□ -1.64
BRCA1-215ENST00000478531 C18orf15Q96N68 181 aa4.83□□□□□ -1.64
BRCA1-215ENST00000478531 DNAH2Q9P225 4427 aa4.83□□□□□ -1.64
BRCA1-215ENST00000478531 TRAV4A0A0B4J268 109 aa4.82□□□□□ -1.64
BRCA1-215ENST00000478531 PARLQ9H300 379 aa4.82□□□□□ -1.64
BRCA1-215ENST00000478531 IGHV3-73A0A0B4J1V6 119 aa4.82□□□□□ -1.64
BRCA1-215ENST00000478531 PAX4O43316 350 aa4.82□□□□□ -1.64
BRCA1-215ENST00000478531 IGLV2-8P01709 118 aa4.82□□□□□ -1.64
BRCA1-215ENST00000478531 ARMS2P0C7Q2 107 aa4.82□□□□□ -1.64
BRCA1-215ENST00000478531 POM121L12Q8N7R1 296 aa4.82□□□□□ -1.64
BRCA1-215ENST00000478531 DAZAP1Q96EP5 407 aaKnown RBP4.82□□□□□ -1.64
BRCA1-215ENST00000478531 VSIG2Q96IQ7 327 aa4.82□□□□□ -1.64
BRCA1-215ENST00000478531 VCX2Q9H322 139 aa4.82□□□□□ -1.64
BRCA1-215ENST00000478531 IL36BQ9NZH7 164 aa4.82□□□□□ -1.64
BRCA1-215ENST00000478531 PHLDA3Q9Y5J5 127 aa4.82□□□□□ -1.64
BRCA1-215ENST00000478531 DNAH10Q8IVF4 4471 aa4.82□□□□□ -1.64
BRCA1-215ENST00000478531 MUC21A0A0G2JKD1 596 aa4.81□□□□□ -1.64
BRCA1-215ENST00000478531 MUC21A0A140T8X8 626 aa4.81□□□□□ -1.64
BRCA1-215ENST00000478531 TMEM250H0YL14 139 aa4.81□□□□□ -1.64
BRCA1-215ENST00000478531 M0R381 172 aa4.81□□□□□ -1.64
BRCA1-215ENST00000478531 NDUFS6O75380 124 aaKnown RBP4.81□□□□□ -1.64
BRCA1-215ENST00000478531 FHL2Q14192 279 aa4.81□□□□□ -1.64
BRCA1-215ENST00000478531 CFAP126Q5VTH2 177 aa4.81□□□□□ -1.64
BRCA1-215ENST00000478531 PRO0255Q9UI72 69 aa4.81□□□□□ -1.64
BRCA1-215ENST00000478531 HHLA3Q9XRX5 114 aa4.81□□□□□ -1.64
BRCA1-215ENST00000478531 A0A096LPF7 62 aa4.8□□□□□ -1.64
BRCA1-215ENST00000478531 F8WDY8 70 aa4.8□□□□□ -1.64
BRCA1-215ENST00000478531 P01737 135 aa4.8□□□□□ -1.64
BRCA1-215ENST00000478531 GZMBP10144 247 aa4.8□□□□□ -1.64
BRCA1-215ENST00000478531 CRYBA4P53673 196 aa4.8□□□□□ -1.64
BRCA1-215ENST00000478531 TNP2Q05952 138 aa4.8□□□□□ -1.64
BRCA1-215ENST00000478531 FAM74A4Q5TZK3 123 aa4.8□□□□□ -1.64
BRCA1-215ENST00000478531 SYT8Q8NBV8 401 aa4.8□□□□□ -1.64
BRCA1-215ENST00000478531 OR2D3Q8NGH3 330 aa4.8□□□□□ -1.64
BRCA1-215ENST00000478531 SMIM12Q96EX1 92 aa4.8□□□□□ -1.64
BRCA1-215ENST00000478531 SMIM7Q9BQ49 75 aa4.8□□□□□ -1.64
BRCA1-215ENST00000478531 JPT2Q9H910 190 aa4.8□□□□□ -1.64
BRCA1-215ENST00000478531 ICOSQ9Y6W8 199 aa4.8□□□□□ -1.64
BRCA1-215ENST00000478531 HECTD4Q9Y4D8 3996 aa4.8□□□□□ -1.64
BRCA1-215ENST00000478531 IGLV2-18A0A075B6J9 118 aa4.8□□□□□ -1.64
BRCA1-215ENST00000478531 K7EN84 100 aa4.8□□□□□ -1.64
BRCA1-215ENST00000478531 RS1O15537 224 aa4.8□□□□□ -1.64
BRCA1-215ENST00000478531 SNAPINO95295 136 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms