RNA–Protein interactions for RNA: ENST00000478359.5

TRAF3IP3-213, Transcript of TRAF3 interacting protein 3, humanhuman

TSL 1 (best)

Gene TRAF3IP3, Length 1,860 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP3-213ENST00000478359 ATOH7Q8N100 152 aa9.3□□□□□ -0.92
TRAF3IP3-213ENST00000478359 NRACQ8N912 160 aa9.3□□□□□ -0.92
TRAF3IP3-213ENST00000478359 DYNLRB2Q8TF09 96 aa9.3□□□□□ -0.92
TRAF3IP3-213ENST00000478359 TIMM8BQ9Y5J9 83 aaPredicted RBP9.3□□□□□ -0.92
TRAF3IP3-213ENST00000478359 A8MTW9 85 aa9.29□□□□□ -0.92
TRAF3IP3-213ENST00000478359 CD7P09564 240 aa9.29□□□□□ -0.92
TRAF3IP3-213ENST00000478359 IGLL1P15814 213 aa9.29□□□□□ -0.92
TRAF3IP3-213ENST00000478359 KIR3DS1Q14943 382 aa9.29□□□□□ -0.92
TRAF3IP3-213ENST00000478359 ADAMTSL5Q6ZMM2 481 aa9.29□□□□□ -0.92
TRAF3IP3-213ENST00000478359 POM121L12Q8N7R1 296 aa9.29□□□□□ -0.92
TRAF3IP3-213ENST00000478359 SYT8Q8NBV8 401 aa9.29□□□□□ -0.92
TRAF3IP3-213ENST00000478359 IFI27L1Q96BM0 104 aa9.29□□□□□ -0.92
TRAF3IP3-213ENST00000478359 JMJD8Q96S16 334 aa9.29□□□□□ -0.92
TRAF3IP3-213ENST00000478359 SPAG8Q99932 426 aaPredicted RBP9.29□□□□□ -0.92
TRAF3IP3-213ENST00000478359 SELENOKQ9Y6D0 94 aa9.29□□□□□ -0.92
TRAF3IP3-213ENST00000478359 IGLV2-18A0A075B6J9 118 aa9.28□□□□□ -0.92
TRAF3IP3-213ENST00000478359 HLA-DRB4P13762 266 aa9.28□□□□□ -0.92
TRAF3IP3-213ENST00000478359 FHL3Q13643 280 aa9.28□□□□□ -0.92
TRAF3IP3-213ENST00000478359 LAGE3Q14657 143 aa9.28□□□□□ -0.92
TRAF3IP3-213ENST00000478359 C18orf65Q6ZTR6 163 aa9.28□□□□□ -0.92
TRAF3IP3-213ENST00000478359 LURAP1LQ8IV03 231 aa9.28□□□□□ -0.92
TRAF3IP3-213ENST00000478359 DLX4Q92988 240 aaPredicted RBP9.28□□□□□ -0.92
TRAF3IP3-213ENST00000478359 ESM1Q9NQ30 184 aa9.28□□□□□ -0.92
TRAF3IP3-213ENST00000478359 HLA-DRB4X5D2U9 266 aa9.28□□□□□ -0.92
TRAF3IP3-213ENST00000478359 ZANQ9Y493 2812 aa9.28□□□□□ -0.92
TRAF3IP3-213ENST00000478359 TRGV11A0A075B6L2 103 aa9.28□□□□□ -0.92
TRAF3IP3-213ENST00000478359 IGHV1OR15-1A0A075B7D0 117 aa9.28□□□□□ -0.92
TRAF3IP3-213ENST00000478359 ATP5LO75964 103 aa9.28□□□□□ -0.92
TRAF3IP3-213ENST00000478359 HNRNPA3P51991 378 aaKnown RBP9.28□□□□□ -0.92
TRAF3IP3-213ENST00000478359 ORMDL2Q53FV1 153 aa9.28□□□□□ -0.92
TRAF3IP3-213ENST00000478359 Q6ZN92 141 aa9.28□□□□□ -0.92
TRAF3IP3-213ENST00000478359 TSSC4Q9Y5U2 329 aaPredicted RBP9.28□□□□□ -0.92
TRAF3IP3-213ENST00000478359 TEX15Q9BXT5 2789 aa9.27□□□□□ -0.92
TRAF3IP3-213ENST00000478359 LINC01549A6NIU2 74 aa9.27□□□□□ -0.93
TRAF3IP3-213ENST00000478359 G0S2P27469 103 aa9.27□□□□□ -0.93
TRAF3IP3-213ENST00000478359 SUMO2P61956 95 aaKnown RBP9.27□□□□□ -0.93
TRAF3IP3-213ENST00000478359 AMTNQ6UX39 209 aa9.27□□□□□ -0.93
TRAF3IP3-213ENST00000478359 C14orf178Q8N769 122 aaPredicted RBP9.27□□□□□ -0.93
TRAF3IP3-213ENST00000478359 C9orf85Q96MD7 179 aa9.27□□□□□ -0.93
TRAF3IP3-213ENST00000478359 SMIM2Q9BVW6 85 aa9.27□□□□□ -0.93
TRAF3IP3-213ENST00000478359 MRPS16Q9Y3D3 137 aaKnown RBP9.27□□□□□ -0.93
TRAF3IP3-213ENST00000478359 H0Y8G0 127 aa9.26□□□□□ -0.93
TRAF3IP3-213ENST00000478359 DEFB131AP59861 70 aa9.26□□□□□ -0.93
TRAF3IP3-213ENST00000478359 HILS1P60008 231 aa9.26□□□□□ -0.93
TRAF3IP3-213ENST00000478359 RPL32P62910 135 aaKnown RBP9.26□□□□□ -0.93
TRAF3IP3-213ENST00000478359 SPINK13Q1W4C9 94 aa9.26□□□□□ -0.93
TRAF3IP3-213ENST00000478359 DEFB114Q30KQ6 69 aa9.26□□□□□ -0.93
TRAF3IP3-213ENST00000478359 TMEM61Q8N0U2 210 aa9.26□□□□□ -0.93
TRAF3IP3-213ENST00000478359 CLUHP3Q96NS8 147 aa9.26□□□□□ -0.93
TRAF3IP3-213ENST00000478359 SNHG12Q9BXW3 62 aa9.26□□□□□ -0.93
TRAF3IP3-213ENST00000478359 GOLT1BQ9Y3E0 138 aa9.26□□□□□ -0.93
TRAF3IP3-213ENST00000478359 MXRA5Q9NR99 2828 aa9.26□□□□□ -0.93
TRAF3IP3-213ENST00000478359 TRAV26-2A0A0B4J265 109 aa9.25□□□□□ -0.93
TRAF3IP3-213ENST00000478359 IGHV3-16A0A0C4DH30 117 aa9.25□□□□□ -0.93
TRAF3IP3-213ENST00000478359 GAS8-AS1O95177 125 aa9.25□□□□□ -0.93
TRAF3IP3-213ENST00000478359 GATA1P15976 413 aaPredicted RBP9.25□□□□□ -0.93
TRAF3IP3-213ENST00000478359 H3BMM0 161 aa9.25□□□□□ -0.93
TRAF3IP3-213ENST00000478359 CCL24O00175 119 aa9.25□□□□□ -0.93
TRAF3IP3-213ENST00000478359 IGKV3-20P01619 116 aa9.25□□□□□ -0.93
TRAF3IP3-213ENST00000478359 CMC4P56277 68 aaPredicted RBP9.25□□□□□ -0.93
TRAF3IP3-213ENST00000478359 MAJINQ3KP22 176 aa9.25□□□□□ -0.93
TRAF3IP3-213ENST00000478359 LINC01006Q8NI28 216 aa9.25□□□□□ -0.93
TRAF3IP3-213ENST00000478359 TMEM158Q8WZ71 300 aa9.25□□□□□ -0.93
TRAF3IP3-213ENST00000478359 PMCHL2Q9BQD1 86 aa9.25□□□□□ -0.93
TRAF3IP3-213ENST00000478359 ITPR3Q14573 2671 aa9.25□□□□□ -0.93
TRAF3IP3-213ENST00000478359 TRAV12-2A0A075B6T6 113 aa9.24□□□□□ -0.93
TRAF3IP3-213ENST00000478359 NDUFA7O95182 113 aa9.24□□□□□ -0.93
TRAF3IP3-213ENST00000478359 MGPP08493 103 aa9.24□□□□□ -0.93
TRAF3IP3-213ENST00000478359 Q8N1Y9 231 aa9.24□□□□□ -0.93
TRAF3IP3-213ENST00000478359 RASL10AQ92737 203 aa9.24□□□□□ -0.93
TRAF3IP3-213ENST00000478359 RAX2Q96IS3 184 aa9.24□□□□□ -0.93
TRAF3IP3-213ENST00000478359 KIF25-AS1Q9Y6Z4 181 aa9.24□□□□□ -0.93
TRAF3IP3-213ENST00000478359 EREGO14944 169 aa9.23□□□□□ -0.93
TRAF3IP3-213ENST00000478359 SLC25A34Q6PIV7 304 aa9.23□□□□□ -0.93
TRAF3IP3-213ENST00000478359 MAP6D1Q9H9H5 199 aa9.23□□□□□ -0.93
TRAF3IP3-213ENST00000478359 hDV102S1A0JD36 115 aa9.23□□□□□ -0.93
TRAF3IP3-213ENST00000478359 PIK3CD-AS1Q5SR53 167 aa9.23□□□□□ -0.93
TRAF3IP3-213ENST00000478359 DUX3Q96PT4 197 aa9.23□□□□□ -0.93
TRAF3IP3-213ENST00000478359 CD28P10747 220 aa9.22□□□□□ -0.93
TRAF3IP3-213ENST00000478359 CD300EQ496F6 205 aaPredicted RBP9.22□□□□□ -0.93
TRAF3IP3-213ENST00000478359 LINC00467Q9BRT7 94 aa9.22□□□□□ -0.93
TRAF3IP3-213ENST00000478359 PDZD2O15018 2839 aa9.22□□□□□ -0.93
TRAF3IP3-213ENST00000478359 NUDT3O95989 172 aa9.21□□□□□ -0.93
TRAF3IP3-213ENST00000478359 PRSS1P07477 247 aa9.21□□□□□ -0.93
TRAF3IP3-213ENST00000478359 FXYD7P58549 80 aa9.21□□□□□ -0.93
TRAF3IP3-213ENST00000478359 LINC00315P59091 139 aa9.21□□□□□ -0.93
TRAF3IP3-213ENST00000478359 ZNF256Q9Y2P7 627 aaPredicted RBP9.21□□□□□ -0.93
TRAF3IP3-213ENST00000478359 CBY3A6NI87 242 aa9.21□□□□□ -0.94
TRAF3IP3-213ENST00000478359 KNCNA6PVL3 124 aa9.21□□□□□ -0.94
TRAF3IP3-213ENST00000478359 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.21□□□□□ -0.94
TRAF3IP3-213ENST00000478359 PTH2Q96A98 100 aa9.21□□□□□ -0.94
TRAF3IP3-213ENST00000478359 C18orf15Q96N68 181 aa9.21□□□□□ -0.94
TRAF3IP3-213ENST00000478359 CITED2Q99967 270 aaPredicted RBP9.21□□□□□ -0.94
TRAF3IP3-213ENST00000478359 TRBV6-5A0A0K0K1A5 114 aa9.2□□□□□ -0.94
TRAF3IP3-213ENST00000478359 TCAPO15273 167 aa9.2□□□□□ -0.94
TRAF3IP3-213ENST00000478359 COX8AP10176 69 aa9.2□□□□□ -0.94
TRAF3IP3-213ENST00000478359 NUTF2P61970 127 aaKnown RBP9.2□□□□□ -0.94
TRAF3IP3-213ENST00000478359 COL5A1-AS1Q5SY13 56 aa9.2□□□□□ -0.94
TRAF3IP3-213ENST00000478359 TOMM6Q96B49 74 aa9.2□□□□□ -0.94
TRAF3IP3-213ENST00000478359 MDFICQ9P1T7 246 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms