RNA–Protein interactions for RNA: ENST00000478288.5

ABCF3-212, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-212ENST00000478288 Q9HAA7 133 aa8.65□□□□□ -1.02
ABCF3-212ENST00000478288 C11orf21Q9P2W6 132 aa8.65□□□□□ -1.02
ABCF3-212ENST00000478288 IGLV2-11P01706 119 aa8.64□□□□□ -1.03
ABCF3-212ENST00000478288 LINC00694P0DN24 101 aa8.64□□□□□ -1.03
ABCF3-212ENST00000478288 ZNF506Q5JVG8 444 aa8.64□□□□□ -1.03
ABCF3-212ENST00000478288 TMEM75Q8N9X5 138 aa8.64□□□□□ -1.03
ABCF3-212ENST00000478288 ATP6V0E2Q8NHE4 81 aa8.64□□□□□ -1.03
ABCF3-212ENST00000478288 PSMG3Q9BT73 122 aaPredicted RBP8.64□□□□□ -1.03
ABCF3-212ENST00000478288 PSG8Q9UQ74 426 aa8.64□□□□□ -1.03
ABCF3-212ENST00000478288 TRAV8-3A0A0A6YYJ7 113 aa8.63□□□□□ -1.03
ABCF3-212ENST00000478288 A8MWV9 139 aa8.63□□□□□ -1.03
ABCF3-212ENST00000478288 HMGB3O15347 200 aaKnown RBP8.63□□□□□ -1.03
ABCF3-212ENST00000478288 MBP02144 154 aa8.63□□□□□ -1.03
ABCF3-212ENST00000478288 GIPP09681 153 aaPredicted RBP8.63□□□□□ -1.03
ABCF3-212ENST00000478288 RNASE3P12724 160 aaKnown RBP8.63□□□□□ -1.03
ABCF3-212ENST00000478288 FLI1Q01543 452 aaPredicted RBP8.63□□□□□ -1.03
ABCF3-212ENST00000478288 SMUG1Q53HV7 270 aa8.63□□□□□ -1.03
ABCF3-212ENST00000478288 TOR2AQ5JU69 321 aa8.63□□□□□ -1.03
ABCF3-212ENST00000478288 CYB561D1Q8N8Q1 229 aa8.63□□□□□ -1.03
ABCF3-212ENST00000478288 INO80EQ8NBZ0 244 aaPredicted RBP8.63□□□□□ -1.03
ABCF3-212ENST00000478288 TMEM167BQ9NRX6 74 aa8.63□□□□□ -1.03
ABCF3-212ENST00000478288 PGPEP1LA6NFU8 196 aa8.62□□□□□ -1.03
ABCF3-212ENST00000478288 GGTLC3B5MD39 225 aa8.62□□□□□ -1.03
ABCF3-212ENST00000478288 IGHV3-30P01768 117 aa8.62□□□□□ -1.03
ABCF3-212ENST00000478288 IGHV3-33P01772 117 aa8.62□□□□□ -1.03
ABCF3-212ENST00000478288 IGHV3-30-3P0DP02 117 aa8.62□□□□□ -1.03
ABCF3-212ENST00000478288 IGHV3-30-5P0DP03 117 aa8.62□□□□□ -1.03
ABCF3-212ENST00000478288 GCHFRP30047 84 aa8.62□□□□□ -1.03
ABCF3-212ENST00000478288 HAMPP81172 84 aa8.62□□□□□ -1.03
ABCF3-212ENST00000478288 SERF2P84101 59 aa8.62□□□□□ -1.03
ABCF3-212ENST00000478288 SAPCD1Q5SSQ6 148 aa8.62□□□□□ -1.03
ABCF3-212ENST00000478288 RAB24Q969Q5 203 aa8.62□□□□□ -1.03
ABCF3-212ENST00000478288 SGK494Q96LW2 274 aa8.62□□□□□ -1.03
ABCF3-212ENST00000478288 EPDR1Q9UM22 224 aa8.62□□□□□ -1.03
ABCF3-212ENST00000478288 A0A087WWC5 75 aa8.61□□□□□ -1.03
ABCF3-212ENST00000478288 IGHV3-73A0A0B4J1V6 119 aa8.61□□□□□ -1.03
ABCF3-212ENST00000478288 CXorf1O96002 111 aa8.61□□□□□ -1.03
ABCF3-212ENST00000478288 PARLQ9H300 379 aa8.61□□□□□ -1.03
ABCF3-212ENST00000478288 FAM30AQ9NZY2 134 aa8.61□□□□□ -1.03
ABCF3-212ENST00000478288 COX11Q9Y6N1 276 aa8.61□□□□□ -1.03
ABCF3-212ENST00000478288 FXYD6-FXYD2A0A087WZ82 144 aa8.6□□□□□ -1.03
ABCF3-212ENST00000478288 A0A1W2PRE2 83 aa8.6□□□□□ -1.03
ABCF3-212ENST00000478288 PLA2G1BP04054 148 aaKnown RBP8.6□□□□□ -1.03
ABCF3-212ENST00000478288 FGF8P55075 233 aaPredicted RBP8.6□□□□□ -1.03
ABCF3-212ENST00000478288 UFSP1Q6NVU6 142 aa8.6□□□□□ -1.03
ABCF3-212ENST00000478288 PRNTQ86SH4 94 aa8.6□□□□□ -1.03
ABCF3-212ENST00000478288 HSD17B11Q8NBQ5 300 aa8.6□□□□□ -1.03
ABCF3-212ENST00000478288 LINC00479Q96M42 142 aa8.6□□□□□ -1.03
ABCF3-212ENST00000478288 AQP10Q96PS8 301 aa8.6□□□□□ -1.03
ABCF3-212ENST00000478288 TNFSF18Q9UNG2 199 aa8.6□□□□□ -1.03
ABCF3-212ENST00000478288 IGKV3D-20A0A0C4DH25 116 aa8.59□□□□□ -1.03
ABCF3-212ENST00000478288 SEC11BP0C7V7 166 aa8.59□□□□□ -1.03
ABCF3-212ENST00000478288 ATP6V0CP27449 155 aa8.59□□□□□ -1.03
ABCF3-212ENST00000478288 SUMO1P63165 101 aaKnown RBP8.59□□□□□ -1.03
ABCF3-212ENST00000478288 WFDC2Q14508 124 aa8.59□□□□□ -1.03
ABCF3-212ENST00000478288 OR2T35Q8NGX2 323 aa8.59□□□□□ -1.03
ABCF3-212ENST00000478288 ACTR3CQ9C0K3 210 aaPredicted RBP8.59□□□□□ -1.03
ABCF3-212ENST00000478288 IL36BQ9NZH7 164 aa8.59□□□□□ -1.03
ABCF3-212ENST00000478288 BORCS7-ASMTA0A0B4J1R7 106 aa8.58□□□□□ -1.04
ABCF3-212ENST00000478288 RHODO00212 210 aa8.58□□□□□ -1.04
ABCF3-212ENST00000478288 S100A4P26447 101 aaKnown RBP8.58□□□□□ -1.04
ABCF3-212ENST00000478288 ASIPP42127 132 aa8.58□□□□□ -1.04
ABCF3-212ENST00000478288 DNLZQ5SXM8 178 aa8.58□□□□□ -1.04
ABCF3-212ENST00000478288 LRP1Q07954 4544 aaKnown RBP8.58□□□□□ -1.04
ABCF3-212ENST00000478288 GAGE12JA6NER3 117 aa8.57□□□□□ -1.04
ABCF3-212ENST00000478288 FABP5P3A8MUU1 101 aa8.57□□□□□ -1.04
ABCF3-212ENST00000478288 KRTAP29-1A8MX34 341 aaPredicted RBP8.57□□□□□ -1.04
ABCF3-212ENST00000478288 J3QL48 77 aa8.57□□□□□ -1.04
ABCF3-212ENST00000478288 GAGE1Q13065 139 aa8.57□□□□□ -1.04
ABCF3-212ENST00000478288 GAGE4Q13068 117 aa8.57□□□□□ -1.04
ABCF3-212ENST00000478288 GAGE5Q13069 117 aa8.57□□□□□ -1.04
ABCF3-212ENST00000478288 LGALSLQ3ZCW2 172 aaPredicted RBP8.57□□□□□ -1.04
ABCF3-212ENST00000478288 GAGE13Q4V321 117 aa8.57□□□□□ -1.04
ABCF3-212ENST00000478288 COX8CQ7Z4L0 72 aa8.57□□□□□ -1.04
ABCF3-212ENST00000478288 Q8N3U1 123 aa8.57□□□□□ -1.04
ABCF3-212ENST00000478288 RMI2Q96E14 147 aa8.57□□□□□ -1.04
ABCF3-212ENST00000478288 CHCHD7Q9BUK0 85 aa8.57□□□□□ -1.04
ABCF3-212ENST00000478288 NKX6-2Q9C056 277 aaPredicted RBP8.57□□□□□ -1.04
ABCF3-212ENST00000478288 DAZ4Q86SG3 579 aaKnown RBP8.56□□□□□ -1.04
ABCF3-212ENST00000478288 LINC00528Q8N1L1 170 aa8.56□□□□□ -1.04
ABCF3-212ENST00000478288 SYT8Q8NBV8 401 aa8.56□□□□□ -1.04
ABCF3-212ENST00000478288 DEFB104AQ8WTQ1 72 aa8.56□□□□□ -1.04
ABCF3-212ENST00000478288 DAZ3Q9NR90 486 aaKnown RBP8.56□□□□□ -1.04
ABCF3-212ENST00000478288 ARL2-SNX15V9GYD0 113 aa8.56□□□□□ -1.04
ABCF3-212ENST00000478288 FAT3Q8TDW7 4589 aa8.56□□□□□ -1.04
ABCF3-212ENST00000478288 PKHD1L1Q86WI1 4243 aa8.55□□□□□ -1.04
ABCF3-212ENST00000478288 B4DEV8 164 aa8.55□□□□□ -1.04
ABCF3-212ENST00000478288 Q86TA4 180 aa8.55□□□□□ -1.04
ABCF3-212ENST00000478288 NIT1Q86X76 327 aa8.55□□□□□ -1.04
ABCF3-212ENST00000478288 C14orf178Q8N769 122 aaPredicted RBP8.55□□□□□ -1.04
ABCF3-212ENST00000478288 Q8N976 141 aa8.55□□□□□ -1.04
ABCF3-212ENST00000478288 HIST1H2BAQ96A08 127 aa8.55□□□□□ -1.04
ABCF3-212ENST00000478288 URGCP-MRPS24S4R325 110 aa8.55□□□□□ -1.04
ABCF3-212ENST00000478288 TRBV10-1A0A0K0K1A3 114 aa8.54□□□□□ -1.04
ABCF3-212ENST00000478288 CTXND1A0A1B0GTU2 59 aa8.54□□□□□ -1.04
ABCF3-212ENST00000478288 PEX7O00628 323 aa8.54□□□□□ -1.04
ABCF3-212ENST00000478288 DMRTA1Q5VZB9 504 aa8.54□□□□□ -1.04
ABCF3-212ENST00000478288 ATRAIDQ6UW56 229 aa8.54□□□□□ -1.04
ABCF3-212ENST00000478288 SAMD10Q9BYL1 202 aa8.54□□□□□ -1.04
ABCF3-212ENST00000478288 Q9UF83 564 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms