RNA–Protein interactions for RNA: ENST00000477558.1

VPS45-207, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,425 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-207ENST00000477558 M0R2Z0 102 aa3.7□□□□□ -1.82
VPS45-207ENST00000477558 OR7C2O60412 319 aa3.7□□□□□ -1.82
VPS45-207ENST00000477558 NDUFS6O75380 124 aaKnown RBP3.7□□□□□ -1.82
VPS45-207ENST00000477558 EIF3GO75821 320 aaKnown RBP eCLIP3.7□□□□□ -1.82
VPS45-207ENST00000477558 SMIM6P0DI80 62 aa3.7□□□□□ -1.82
VPS45-207ENST00000477558 ARL14EPLP0DKL9 152 aa3.7□□□□□ -1.82
VPS45-207ENST00000477558 CT45A10P0DMU9 189 aa3.7□□□□□ -1.82
VPS45-207ENST00000477558 TSPOP30536 169 aa3.7□□□□□ -1.82
VPS45-207ENST00000477558 HIST1H1AQ02539 215 aaPredicted RBP3.7□□□□□ -1.82
VPS45-207ENST00000477558 LGALSLQ3ZCW2 172 aaPredicted RBP3.7□□□□□ -1.82
VPS45-207ENST00000477558 CASC10Q5T4H9 136 aa3.7□□□□□ -1.82
VPS45-207ENST00000477558 EXOC3-AS1Q8N2X6 119 aa3.7□□□□□ -1.82
VPS45-207ENST00000477558 ZFAND2AQ8N6M9 145 aa3.7□□□□□ -1.82
VPS45-207ENST00000477558 RARRES2Q99969 163 aa3.7□□□□□ -1.82
VPS45-207ENST00000477558 C20orf144Q9BQM9 153 aa3.7□□□□□ -1.82
VPS45-207ENST00000477558 Q9H3A6 140 aa3.7□□□□□ -1.82
VPS45-207ENST00000477558 BIN3Q9NQY0 253 aa3.7□□□□□ -1.82
VPS45-207ENST00000477558 OTORQ9NRC9 128 aa3.7□□□□□ -1.82
VPS45-207ENST00000477558 XCL2Q9UBD3 114 aa3.7□□□□□ -1.82
VPS45-207ENST00000477558 ARL2-SNX15V9GYD0 113 aa3.7□□□□□ -1.82
VPS45-207ENST00000477558 UMAD1C9J7I0 102 aa3.7□□□□□ -1.82
VPS45-207ENST00000477558 INSP01308 110 aa3.7□□□□□ -1.82
VPS45-207ENST00000477558 S100PP25815 95 aa3.7□□□□□ -1.82
VPS45-207ENST00000477558 GCHFRP30047 84 aa3.7□□□□□ -1.82
VPS45-207ENST00000477558 SPINK13Q1W4C9 94 aa3.7□□□□□ -1.82
VPS45-207ENST00000477558 LBHQ53QV2 105 aaPredicted RBP3.7□□□□□ -1.82
VPS45-207ENST00000477558 DPPA3Q6W0C5 159 aa3.7□□□□□ -1.82
VPS45-207ENST00000477558 TMUB2Q71RG4 321 aa3.7□□□□□ -1.82
VPS45-207ENST00000477558 ERASQ7Z444 233 aa3.7□□□□□ -1.82
VPS45-207ENST00000477558 KRTAP7-1Q8IUC3 87 aa3.7□□□□□ -1.82
VPS45-207ENST00000477558 BAP18Q8IXM2 172 aa3.7□□□□□ -1.82
VPS45-207ENST00000477558 TMEM256Q8N2U0 113 aa3.7□□□□□ -1.82
VPS45-207ENST00000477558 OR4B1Q8NGF8 309 aa3.7□□□□□ -1.82
VPS45-207ENST00000477558 BLNKQ8WV28 456 aa3.7□□□□□ -1.82
VPS45-207ENST00000477558 LINC00467Q9BRT7 94 aa3.7□□□□□ -1.82
VPS45-207ENST00000477558 KRTAP4-4Q9BYR3 166 aa3.7□□□□□ -1.82
VPS45-207ENST00000477558 ACTR3CQ9C0K3 210 aaPredicted RBP3.7□□□□□ -1.82
VPS45-207ENST00000477558 AGPAT4-IT1Q9H0P7 198 aa3.7□□□□□ -1.82
VPS45-207ENST00000477558 GSN-AS1Q9NRJ2 163 aa3.7□□□□□ -1.82
VPS45-207ENST00000477558 ZNF492Q9P255 531 aa3.7□□□□□ -1.82
VPS45-207ENST00000477558 LENEPQ9Y5L5 61 aa3.7□□□□□ -1.82
VPS45-207ENST00000477558 BIRC6Q9NR09 4857 aa3.69□□□□□ -1.82
VPS45-207ENST00000477558 IGKV2-40A0A087WW87 121 aaPredicted RBP3.69□□□□□ -1.82
VPS45-207ENST00000477558 TRAV1-1A0A0B4J248 108 aa3.69□□□□□ -1.82
VPS45-207ENST00000477558 A0A1W2PPV4 95 aa3.69□□□□□ -1.82
VPS45-207ENST00000477558 KANTRA0A1W2PQU2 76 aa3.69□□□□□ -1.82
VPS45-207ENST00000477558 A0A1W2PRE2 83 aa3.69□□□□□ -1.82
VPS45-207ENST00000477558 HMGB3O15347 200 aaKnown RBP3.69□□□□□ -1.82
VPS45-207ENST00000477558 ZNF324O75467 553 aaPredicted RBP3.69□□□□□ -1.82
VPS45-207ENST00000477558 CXorf1O96002 111 aa3.69□□□□□ -1.82
VPS45-207ENST00000477558 IGKV2D-40P01614 121 aaPredicted RBP3.69□□□□□ -1.82
VPS45-207ENST00000477558 S100A8P05109 93 aa3.69□□□□□ -1.82
VPS45-207ENST00000477558 TPT1P13693 172 aaKnown RBP3.69□□□□□ -1.82
VPS45-207ENST00000477558 FHITP49789 147 aa3.69□□□□□ -1.82
VPS45-207ENST00000477558 PRR9Q5T870 116 aa3.69□□□□□ -1.82
VPS45-207ENST00000477558 EIF4E3Q8N5X7 224 aaKnown RBP3.69□□□□□ -1.82
VPS45-207ENST00000477558 LINC00612Q8N6U2 182 aa3.69□□□□□ -1.82
VPS45-207ENST00000477558 C5orf17Q8NAS9 161 aa3.69□□□□□ -1.82
VPS45-207ENST00000477558 OR10J6PQ8NGY7 276 aa3.69□□□□□ -1.82
VPS45-207ENST00000477558 RXFP4Q8TDU9 374 aa3.69□□□□□ -1.82
VPS45-207ENST00000477558 MBD3L1Q8WWY6 194 aa3.69□□□□□ -1.82
VPS45-207ENST00000477558 LINC00477Q96M19 166 aa3.69□□□□□ -1.82
VPS45-207ENST00000477558 VGLL1Q99990 258 aa3.69□□□□□ -1.82
VPS45-207ENST00000477558 TMEM167BQ9NRX6 74 aa3.69□□□□□ -1.82
VPS45-207ENST00000477558 CELA1Q9UNI1 258 aa3.69□□□□□ -1.82
VPS45-207ENST00000477558 GOLT1BQ9Y3E0 138 aa3.69□□□□□ -1.82
VPS45-207ENST00000477558 DNAH17Q9UFH2 4485 aa3.69□□□□□ -1.82
VPS45-207ENST00000477558 FAT2Q9NYQ8 4349 aa3.68□□□□□ -1.82
VPS45-207ENST00000477558 MUC4Q99102 2169 aa3.68□□□□□ -1.82
VPS45-207ENST00000477558 FRAS1Q86XX4 4008 aa3.68□□□□□ -1.82
VPS45-207ENST00000477558 TRAV12-2A0A075B6T6 113 aa3.68□□□□□ -1.82
VPS45-207ENST00000477558 TMEM189A5PLL7 270 aa3.68□□□□□ -1.82
VPS45-207ENST00000477558 MAP1LC3B2A6NCE7 125 aa3.68□□□□□ -1.82
VPS45-207ENST00000477558 FAM74A7A6NL05 159 aa3.68□□□□□ -1.82
VPS45-207ENST00000477558 H7BYZ3 331 aa3.68□□□□□ -1.82
VPS45-207ENST00000477558 TCRAP04437 139 aa3.68□□□□□ -1.82
VPS45-207ENST00000477558 PRB4P10163 310 aaPredicted RBP3.68□□□□□ -1.82
VPS45-207ENST00000477558 LEPP41159 167 aa3.68□□□□□ -1.82
VPS45-207ENST00000477558 ZNF138P52744 262 aa3.68□□□□□ -1.82
VPS45-207ENST00000477558 FXYD7P58549 80 aa3.68□□□□□ -1.82
VPS45-207ENST00000477558 TAS2R60P59551 318 aa3.68□□□□□ -1.82
VPS45-207ENST00000477558 RANP62826 216 aaKnown RBP3.68□□□□□ -1.82
VPS45-207ENST00000477558 EIF5AP63241 154 aaKnown RBP3.68□□□□□ -1.82
VPS45-207ENST00000477558 ERCC8Q13216 396 aa3.68□□□□□ -1.82
VPS45-207ENST00000477558 AKR1C8PQ5T2L2 129 aa3.68□□□□□ -1.82
VPS45-207ENST00000477558 Q6AWC8 147 aa3.68□□□□□ -1.82
VPS45-207ENST00000477558 COX8CQ7Z4L0 72 aa3.68□□□□□ -1.82
VPS45-207ENST00000477558 C11orf72Q8NBR9 251 aa3.68□□□□□ -1.82
VPS45-207ENST00000477558 Q8TAT8 98 aa3.68□□□□□ -1.82
VPS45-207ENST00000477558 TMEM263Q8WUH6 116 aaKnown RBP3.68□□□□□ -1.82
VPS45-207ENST00000477558 TVP23CQ96ET8 276 aa3.68□□□□□ -1.82
VPS45-207ENST00000477558 TCEAL7Q9BRU2 100 aa3.68□□□□□ -1.82
VPS45-207ENST00000477558 ALKBH7Q9BT30 221 aaPredicted RBP3.68□□□□□ -1.82
VPS45-207ENST00000477558 ZNF471Q9BX82 626 aaPredicted RBP3.68□□□□□ -1.82
VPS45-207ENST00000477558 MAP1LC3BQ9GZQ8 125 aa3.68□□□□□ -1.82
VPS45-207ENST00000477558 TP53TG3Q9ULZ0 132 aa3.68□□□□□ -1.82
VPS45-207ENST00000477558 YTHDF2Q9Y5A9 579 aaKnown RBP3.68□□□□□ -1.82
VPS45-207ENST00000477558 TEX48A0A1B0GUV7 120 aa3.67□□□□□ -1.82
VPS45-207ENST00000477558 C7orf71A4D174 169 aa3.67□□□□□ -1.82
VPS45-207ENST00000477558 NUPR2A6NF83 97 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms