RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 RHEBQ15382 184 aa12.42□□□□□ -0.42
PTPN7-209ENST00000477554 OR10G8Q8NGN5 311 aa12.42□□□□□ -0.42
PTPN7-209ENST00000477554 TMEM263Q8WUH6 116 aaKnown RBP12.42□□□□□ -0.42
PTPN7-209ENST00000477554 ANAPC16Q96DE5 110 aa12.42□□□□□ -0.42
PTPN7-209ENST00000477554 KCNS1Q96KK3 526 aa12.42□□□□□ -0.42
PTPN7-209ENST00000477554 PYGO2Q9BRQ0 406 aa12.42□□□□□ -0.42
PTPN7-209ENST00000477554 NDUFAF3Q9BU61 184 aa12.42□□□□□ -0.42
PTPN7-209ENST00000477554 LINC01559Q495D7 138 aa12.41□□□□□ -0.42
PTPN7-209ENST00000477554 RPP21Q9H633 154 aaKnown RBP12.41□□□□□ -0.42
PTPN7-209ENST00000477554 NAGKQ9UJ70 344 aa12.41□□□□□ -0.42
PTPN7-209ENST00000477554 DNAH17Q9UFH2 4485 aa12.41□□□□□ -0.42
PTPN7-209ENST00000477554 IGHV1OR15-1A0A075B7D0 117 aa12.4□□□□□ -0.42
PTPN7-209ENST00000477554 XKRY2A2RUG3 117 aa12.4□□□□□ -0.42
PTPN7-209ENST00000477554 TCTAP57738 103 aa12.4□□□□□ -0.42
PTPN7-209ENST00000477554 RPS20P60866 119 aaKnown RBP12.4□□□□□ -0.42
PTPN7-209ENST00000477554 TDRG1Q3Y452 100 aa12.4□□□□□ -0.42
PTPN7-209ENST00000477554 RNF212Q495C1 297 aa12.4□□□□□ -0.42
PTPN7-209ENST00000477554 C11orf72Q8NBR9 251 aa12.4□□□□□ -0.42
PTPN7-209ENST00000477554 LINC00467Q9BRT7 94 aa12.4□□□□□ -0.42
PTPN7-209ENST00000477554 TIMM8BQ9Y5J9 83 aaPredicted RBP12.4□□□□□ -0.42
PTPN7-209ENST00000477554 TEX48A0A1B0GUV7 120 aa12.39□□□□□ -0.43
PTPN7-209ENST00000477554 ANXA2RQ3ZCQ2 193 aa12.39□□□□□ -0.43
PTPN7-209ENST00000477554 CT83Q5H943 113 aa12.39□□□□□ -0.43
PTPN7-209ENST00000477554 MUC21Q5SSG8 566 aa12.39□□□□□ -0.43
PTPN7-209ENST00000477554 OR2D3Q8NGH3 330 aa12.39□□□□□ -0.43
PTPN7-209ENST00000477554 CTDSP1Q9GZU7 261 aa12.39□□□□□ -0.43
PTPN7-209ENST00000477554 GSN-AS1Q9NRJ2 163 aa12.39□□□□□ -0.43
PTPN7-209ENST00000477554 C11orf21Q9P2W6 132 aa12.39□□□□□ -0.43
PTPN7-209ENST00000477554 IGKV3D-20A0A0C4DH25 116 aa12.38□□□□□ -0.43
PTPN7-209ENST00000477554 C7orf77A4D0Y5 90 aa12.38□□□□□ -0.43
PTPN7-209ENST00000477554 A8MWL6 223 aa12.38□□□□□ -0.43
PTPN7-209ENST00000477554 Q6ZTI0 123 aa12.38□□□□□ -0.43
PTPN7-209ENST00000477554 LINC00612Q8N6U2 182 aa12.38□□□□□ -0.43
PTPN7-209ENST00000477554 V9GYV3 84 aa12.38□□□□□ -0.43
PTPN7-209ENST00000477554 NACAE9PAV3 2078 aa12.38□□□□□ -0.43
PTPN7-209ENST00000477554 HECTD4Q9Y4D8 3996 aa12.38□□□□□ -0.43
PTPN7-209ENST00000477554 A0A087WWC5 75 aa12.37□□□□□ -0.43
PTPN7-209ENST00000477554 GAGE12BA1L429 117 aa12.37□□□□□ -0.43
PTPN7-209ENST00000477554 F5H768 121 aa12.37□□□□□ -0.43
PTPN7-209ENST00000477554 GAGE7O76087 117 aa12.37□□□□□ -0.43
PTPN7-209ENST00000477554 CXCL1P09341 107 aa12.37□□□□□ -0.43
PTPN7-209ENST00000477554 GAGE12FP0CL80 117 aa12.37□□□□□ -0.43
PTPN7-209ENST00000477554 GAGE12GP0CL81 117 aa12.37□□□□□ -0.43
PTPN7-209ENST00000477554 GAGE12IP0CL82 117 aa12.37□□□□□ -0.43
PTPN7-209ENST00000477554 HOXA5P20719 270 aa12.37□□□□□ -0.43
PTPN7-209ENST00000477554 ZNF493Q6ZR52 646 aa12.37□□□□□ -0.43
PTPN7-209ENST00000477554 RPS10P5Q9NQ39 176 aa12.37□□□□□ -0.43
PTPN7-209ENST00000477554 TRGV11A0A075B6L2 103 aa12.37□□□□□ -0.43
PTPN7-209ENST00000477554 CBY3A6NI87 242 aa12.37□□□□□ -0.43
PTPN7-209ENST00000477554 RPL19P84098 196 aaKnown RBP12.37□□□□□ -0.43
PTPN7-209ENST00000477554 TMEM242Q9NWH2 141 aa12.37□□□□□ -0.43
PTPN7-209ENST00000477554 TMSB15BA0A087X1C1 80 aa12.36□□□□□ -0.43
PTPN7-209ENST00000477554 FAM231BA6NCW3 169 aa12.35□□□□□ -0.43
PTPN7-209ENST00000477554 TYMSP04818 313 aa12.35□□□□□ -0.43
PTPN7-209ENST00000477554 ASIPP42127 132 aa12.35□□□□□ -0.43
PTPN7-209ENST00000477554 DNLZQ5SXM8 178 aa12.35□□□□□ -0.43
PTPN7-209ENST00000477554 POM121L12Q8N7R1 296 aa12.35□□□□□ -0.43
PTPN7-209ENST00000477554 TSKUQ8WUA8 353 aa12.35□□□□□ -0.43
PTPN7-209ENST00000477554 GFRA4Q9GZZ7 299 aa12.35□□□□□ -0.43
PTPN7-209ENST00000477554 M0R2N4 97 aa12.34□□□□□ -0.43
PTPN7-209ENST00000477554 GNRH2O43555 120 aa12.34□□□□□ -0.43
PTPN7-209ENST00000477554 ATP5G1P05496 136 aa12.34□□□□□ -0.43
PTPN7-209ENST00000477554 S100A4P26447 101 aaKnown RBP12.34□□□□□ -0.43
PTPN7-209ENST00000477554 IGLV2-18A0A075B6J9 118 aa12.33□□□□□ -0.44
PTPN7-209ENST00000477554 A0A1W2PPQ1 181 aa12.33□□□□□ -0.44
PTPN7-209ENST00000477554 GRIFINA4D1Z8 144 aa12.33□□□□□ -0.44
PTPN7-209ENST00000477554 SNURFLB1AK76 121 aa12.33□□□□□ -0.44
PTPN7-209ENST00000477554 ZNF575Q86XF7 245 aa12.33□□□□□ -0.44
PTPN7-209ENST00000477554 IMMP2LQ96T52 175 aa12.33□□□□□ -0.44
PTPN7-209ENST00000477554 IL36BQ9NZH7 164 aa12.33□□□□□ -0.44
PTPN7-209ENST00000477554 MDFICQ9P1T7 246 aa12.33□□□□□ -0.44
PTPN7-209ENST00000477554 A0A0J9YY99 117 aa12.32□□□□□ -0.44
PTPN7-209ENST00000477554 SMIM27A0A1W2PRY6 76 aa12.32□□□□□ -0.44
PTPN7-209ENST00000477554 MED14OSP0DP75 135 aa12.32□□□□□ -0.44
PTPN7-209ENST00000477554 GZMBP10144 247 aa12.32□□□□□ -0.44
PTPN7-209ENST00000477554 ZNF415Q09FC8 603 aa12.32□□□□□ -0.44
PTPN7-209ENST00000477554 DAZ2Q13117 558 aaKnown RBP12.32□□□□□ -0.44
PTPN7-209ENST00000477554 MRPL16Q9NX20 251 aaKnown RBP12.32□□□□□ -0.44
PTPN7-209ENST00000477554 IGHV3-16A0A0C4DH30 117 aa12.31□□□□□ -0.44
PTPN7-209ENST00000477554 NUDT3O95989 172 aa12.31□□□□□ -0.44
PTPN7-209ENST00000477554 P0DMU3 169 aa12.31□□□□□ -0.44
PTPN7-209ENST00000477554 FAM231AP0DMU4 169 aa12.31□□□□□ -0.44
PTPN7-209ENST00000477554 FAM231CP0DMU5 169 aa12.31□□□□□ -0.44
PTPN7-209ENST00000477554 FOXA3P55318 350 aaPredicted RBP12.31□□□□□ -0.44
PTPN7-209ENST00000477554 ATRAIDQ6UW56 229 aa12.31□□□□□ -0.44
PTPN7-209ENST00000477554 FER1L6-AS1Q8NA97 138 aa12.31□□□□□ -0.44
PTPN7-209ENST00000477554 FAM210BQ96KR6 192 aa12.31□□□□□ -0.44
PTPN7-209ENST00000477554 NAT8BQ9UHF3 227 aa12.31□□□□□ -0.44
PTPN7-209ENST00000477554 PKD1P98161 4303 aa12.3□□□□□ -0.44
PTPN7-209ENST00000477554 TRAV26-1A0A087WT03 109 aa12.3□□□□□ -0.44
PTPN7-209ENST00000477554 TRGV1A0A0A0MS02 117 aa12.3□□□□□ -0.44
PTPN7-209ENST00000477554 F2Z2F3 143 aa12.3□□□□□ -0.44
PTPN7-209ENST00000477554 TCL1AP56279 114 aa12.3□□□□□ -0.44
PTPN7-209ENST00000477554 KCNIP4Q6PIL6 250 aa12.3□□□□□ -0.44
PTPN7-209ENST00000477554 HIGD1CA8MV81 97 aa12.29□□□□□ -0.44
PTPN7-209ENST00000477554 H3BVH4 76 aa12.29□□□□□ -0.44
PTPN7-209ENST00000477554 SPINK4O60575 86 aa12.29□□□□□ -0.44
PTPN7-209ENST00000477554 OR5AL1P0C617 328 aa12.29□□□□□ -0.44
PTPN7-209ENST00000477554 ARMS2P0C7Q2 107 aa12.29□□□□□ -0.44
PTPN7-209ENST00000477554 IGLC6P0CF74 106 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms