RNA–Protein interactions for RNA: ENST00000477523.1

RGPD5-209, Transcript of RANBP2-like and GRIP domain containing 5, humanhuman

TSL 1 (best)

Gene RGPD5, Length 6,902 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD5-209ENST00000477523 SHISA2Q6UWI4 295 aa3.38□□□□□ -1.87
RGPD5-209ENST00000477523 C20orf144Q9BQM9 153 aa3.38□□□□□ -1.87
RGPD5-209ENST00000477523 ZFHX4Q86UP3 3567 aa3.38□□□□□ -1.87
RGPD5-209ENST00000477523 MRPL51Q4U2R6 128 aaKnown RBP3.38□□□□□ -1.87
RGPD5-209ENST00000477523 FAM19A2Q8N3H0 131 aa3.38□□□□□ -1.87
RGPD5-209ENST00000477523 TMEM158Q8WZ71 300 aa3.38□□□□□ -1.87
RGPD5-209ENST00000477523 CHCHD1Q96BP2 118 aaKnown RBP3.38□□□□□ -1.87
RGPD5-209ENST00000477523 KIR2DL4Q99706 377 aa3.38□□□□□ -1.87
RGPD5-209ENST00000477523 TEP1Q99973 2627 aaKnown RBP3.38□□□□□ -1.87
RGPD5-209ENST00000477523 MORN3Q6PF18 240 aaPredicted RBP3.38□□□□□ -1.87
RGPD5-209ENST00000477523 ZNF493Q6ZR52 646 aa3.38□□□□□ -1.87
RGPD5-209ENST00000477523 Q8N1Y9 231 aa3.38□□□□□ -1.87
RGPD5-209ENST00000477523 TRGV2A0A075B6R0 118 aa3.38□□□□□ -1.87
RGPD5-209ENST00000477523 A0A087WWL8 130 aa3.38□□□□□ -1.87
RGPD5-209ENST00000477523 TSTD3H0UI37 97 aa3.38□□□□□ -1.87
RGPD5-209ENST00000477523 SMKR1H3BMG3 65 aa3.38□□□□□ -1.87
RGPD5-209ENST00000477523 SPRY2O43597 315 aa3.38□□□□□ -1.87
RGPD5-209ENST00000477523 FCER1GP30273 86 aa3.38□□□□□ -1.87
RGPD5-209ENST00000477523 NIT1Q86X76 327 aa3.38□□□□□ -1.87
RGPD5-209ENST00000477523 SPXQ9BT56 116 aa3.38□□□□□ -1.87
RGPD5-209ENST00000477523 ZANQ9Y493 2812 aa3.38□□□□□ -1.87
RGPD5-209ENST00000477523 BAHCC1Q9P281 2608 aa3.38□□□□□ -1.87
RGPD5-209ENST00000477523 TRGV1A0A0A0MS02 117 aa3.38□□□□□ -1.87
RGPD5-209ENST00000477523 TNFRSF6BO95407 300 aa3.38□□□□□ -1.87
RGPD5-209ENST00000477523 ZNF124Q15973 351 aa3.38□□□□□ -1.87
RGPD5-209ENST00000477523 TDRG1Q3Y452 100 aa3.38□□□□□ -1.87
RGPD5-209ENST00000477523 MRAP2Q96G30 205 aa3.38□□□□□ -1.87
RGPD5-209ENST00000477523 HSPB8Q9UJY1 196 aa3.38□□□□□ -1.87
RGPD5-209ENST00000477523 SNAI2O43623 268 aa3.37□□□□□ -1.87
RGPD5-209ENST00000477523 NPYP01303 97 aa3.37□□□□□ -1.87
RGPD5-209ENST00000477523 PRSS1P07477 247 aa3.37□□□□□ -1.87
RGPD5-209ENST00000477523 LINC00482Q8N8I6 264 aa3.37□□□□□ -1.87
RGPD5-209ENST00000477523 FBN2P35556 2912 aa3.37□□□□□ -1.87
RGPD5-209ENST00000477523 TEX15Q9BXT5 2789 aa3.37□□□□□ -1.87
RGPD5-209ENST00000477523 RHODO00212 210 aa3.37□□□□□ -1.87
RGPD5-209ENST00000477523 LINC00518Q8N0U6 118 aa3.37□□□□□ -1.87
RGPD5-209ENST00000477523 MAP1LC3CQ9BXW4 147 aa3.37□□□□□ -1.87
RGPD5-209ENST00000477523 ST20Q9HBF5 79 aa3.37□□□□□ -1.87
RGPD5-209ENST00000477523 GSN-AS1Q9NRJ2 163 aa3.37□□□□□ -1.87
RGPD5-209ENST00000477523 HBDP02042 147 aa3.37□□□□□ -1.87
RGPD5-209ENST00000477523 EMP1P54849 157 aa3.37□□□□□ -1.87
RGPD5-209ENST00000477523 ZNF705AQ6ZN79 300 aaPredicted RBP3.37□□□□□ -1.87
RGPD5-209ENST00000477523 TMEM70Q9BUB7 260 aa3.37□□□□□ -1.87
RGPD5-209ENST00000477523 TNFRSF18Q9Y5U5 241 aa3.37□□□□□ -1.87
RGPD5-209ENST00000477523 A8MWV9 139 aa3.37□□□□□ -1.87
RGPD5-209ENST00000477523 G0S2P27469 103 aa3.37□□□□□ -1.87
RGPD5-209ENST00000477523 Q6ZN92 141 aa3.37□□□□□ -1.87
RGPD5-209ENST00000477523 AMTNQ6UX39 209 aa3.37□□□□□ -1.87
RGPD5-209ENST00000477523 OR4C5Q8NGB2 326 aa3.37□□□□□ -1.87
RGPD5-209ENST00000477523 IGHV3-16A0A0C4DH30 117 aa3.36□□□□□ -1.87
RGPD5-209ENST00000477523 BTF3P20290 206 aaKnown RBP3.36□□□□□ -1.87
RGPD5-209ENST00000477523 ORMDL2Q53FV1 153 aa3.36□□□□□ -1.87
RGPD5-209ENST00000477523 Q6ZQT7 251 aa3.36□□□□□ -1.87
RGPD5-209ENST00000477523 DEFB125Q8N687 156 aa3.36□□□□□ -1.87
RGPD5-209ENST00000477523 VAMP8Q9BV40 100 aa3.36□□□□□ -1.87
RGPD5-209ENST00000477523 ZNF256Q9Y2P7 627 aaPredicted RBP3.36□□□□□ -1.87
RGPD5-209ENST00000477523 TRAV26-2A0A0B4J265 109 aa3.36□□□□□ -1.87
RGPD5-209ENST00000477523 DMRTA1Q5VZB9 504 aa3.36□□□□□ -1.87
RGPD5-209ENST00000477523 CNFNQ9BYD5 112 aa3.36□□□□□ -1.87
RGPD5-209ENST00000477523 MRPL16Q9NX20 251 aaKnown RBP3.36□□□□□ -1.87
RGPD5-209ENST00000477523 DCHS2Q6V1P9 2916 aa3.36□□□□□ -1.87
RGPD5-209ENST00000477523 NUDT3O95989 172 aa3.36□□□□□ -1.87
RGPD5-209ENST00000477523 IFI27P40305 119 aaPredicted RBP3.36□□□□□ -1.87
RGPD5-209ENST00000477523 FAM110AQ9BQ89 295 aa3.36□□□□□ -1.87
RGPD5-209ENST00000477523 CSTL1Q9H114 145 aa3.36□□□□□ -1.87
RGPD5-209ENST00000477523 STAB1Q9NY15 2570 aa3.36□□□□□ -1.87
RGPD5-209ENST00000477523 APOC4P55056 127 aa3.36□□□□□ -1.87
RGPD5-209ENST00000477523 SUMO2P61956 95 aaKnown RBP3.36□□□□□ -1.87
RGPD5-209ENST00000477523 JOSD1Q15040 202 aaPredicted RBP3.36□□□□□ -1.87
RGPD5-209ENST00000477523 TRPT1Q86TN4 253 aaKnown RBP3.36□□□□□ -1.87
RGPD5-209ENST00000477523 MDFICQ9P1T7 246 aa3.36□□□□□ -1.87
RGPD5-209ENST00000477523 ADARB2-AS1A8MUL3 147 aa3.36□□□□□ -1.87
RGPD5-209ENST00000477523 M0R2P5 195 aa3.36□□□□□ -1.87
RGPD5-209ENST00000477523 PMCHL1Q16048 86 aa3.36□□□□□ -1.87
RGPD5-209ENST00000477523 DGAT2L7PQ6IED9 249 aa3.36□□□□□ -1.87
RGPD5-209ENST00000477523 Q8N8P6 123 aa3.36□□□□□ -1.87
RGPD5-209ENST00000477523 CELSR2Q9HCU4 2923 aa3.36□□□□□ -1.87
RGPD5-209ENST00000477523 IGHV4-4A0A075B6R2 117 aa3.35□□□□□ -1.87
RGPD5-209ENST00000477523 IGHV3-73A0A0B4J1V6 119 aa3.35□□□□□ -1.87
RGPD5-209ENST00000477523 IGLL1P15814 213 aa3.35□□□□□ -1.87
RGPD5-209ENST00000477523 KRTAP24-1Q3LI83 254 aa3.35□□□□□ -1.87
RGPD5-209ENST00000477523 SMIM2Q9BVW6 85 aa3.35□□□□□ -1.87
RGPD5-209ENST00000477523 WFDC10AQ9H1F0 79 aa3.35□□□□□ -1.87
RGPD5-209ENST00000477523 TP53TG3Q9ULZ0 132 aa3.35□□□□□ -1.87
RGPD5-209ENST00000477523 HIVEP1P15822 2718 aa3.35□□□□□ -1.87
RGPD5-209ENST00000477523 NSD1Q96L73 2696 aaPredicted RBP3.35□□□□□ -1.87
RGPD5-209ENST00000477523 ESDP10768 282 aa3.35□□□□□ -1.87
RGPD5-209ENST00000477523 RNASE3P12724 160 aaKnown RBP3.35□□□□□ -1.87
RGPD5-209ENST00000477523 PYY3Q5JQD4 70 aa3.35□□□□□ -1.87
RGPD5-209ENST00000477523 NUPR1O60356 82 aa3.35□□□□□ -1.87
RGPD5-209ENST00000477523 GATA1P15976 413 aaPredicted RBP3.35□□□□□ -1.87
RGPD5-209ENST00000477523 C18orf15Q96N68 181 aa3.35□□□□□ -1.87
RGPD5-209ENST00000477523 C20orf78Q9BR46 151 aa3.35□□□□□ -1.87
RGPD5-209ENST00000477523 RELNP78509 3460 aa3.35□□□□□ -1.87
RGPD5-209ENST00000477523 TRGV4A0A0C4DH28 118 aa3.35□□□□□ -1.87
RGPD5-209ENST00000477523 SDHAF1A6NFY7 115 aa3.35□□□□□ -1.87
RGPD5-209ENST00000477523 ATP5LO75964 103 aa3.35□□□□□ -1.87
RGPD5-209ENST00000477523 C3orf79P0CE67 100 aa3.35□□□□□ -1.87
RGPD5-209ENST00000477523 PET117Q6UWS5 81 aa3.35□□□□□ -1.87
RGPD5-209ENST00000477523 FAM19A4Q96LR4 140 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms