RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 GAGE12HA6NDE8 117 aa14.54□□□□□ -0.08
VARS2-209ENST00000477288 MRPL23Q16540 153 aaKnown RBP14.54□□□□□ -0.08
VARS2-209ENST00000477288 ATP5G1P05496 136 aa14.53□□□□□ -0.08
VARS2-209ENST00000477288 ATP6V0E2Q8NHE4 81 aa14.53□□□□□ -0.08
VARS2-209ENST00000477288 C1orf147Q96MC9 270 aaPredicted RBP14.53□□□□□ -0.08
VARS2-209ENST00000477288 GATA1P15976 413 aaPredicted RBP14.53□□□□□ -0.08
VARS2-209ENST00000477288 ZNF524Q96C55 264 aa14.53□□□□□ -0.08
VARS2-209ENST00000477288 K7EQD1 137 aa14.53□□□□□ -0.08
VARS2-209ENST00000477288 NPSP0C0P6 89 aa14.53□□□□□ -0.08
VARS2-209ENST00000477288 WT1P19544 449 aaPredicted RBP14.53□□□□□ -0.08
VARS2-209ENST00000477288 ZNF493Q6ZR52 646 aa14.53□□□□□ -0.08
VARS2-209ENST00000477288 HIST2H2BCQ6DN03 193 aa14.52□□□□□ -0.08
VARS2-209ENST00000477288 NPBQ8NG41 125 aa14.52□□□□□ -0.08
VARS2-209ENST00000477288 NCR3O14931 201 aa14.52□□□□□ -0.08
VARS2-209ENST00000477288 KLF2Q9Y5W3 355 aaPredicted RBP14.52□□□□□ -0.08
VARS2-209ENST00000477288 NDUFB1O75438 58 aa14.52□□□□□ -0.09
VARS2-209ENST00000477288 HERV-K104P63124 156 aa14.52□□□□□ -0.09
VARS2-209ENST00000477288 RPL39LQ96EH5 51 aaKnown RBP14.52□□□□□ -0.09
VARS2-209ENST00000477288 COX7A2LO14548 114 aa14.52□□□□□ -0.09
VARS2-209ENST00000477288 SPANXDQ9BXN6 97 aa14.52□□□□□ -0.09
VARS2-209ENST00000477288 ANAPC1Q9H1A4 1944 aa14.51□□□□□ -0.09
VARS2-209ENST00000477288 BLCAPP62952 87 aa14.51□□□□□ -0.09
VARS2-209ENST00000477288 SPRNQ5BIV9 151 aa14.51□□□□□ -0.09
VARS2-209ENST00000477288 BAALCQ8WXS3 180 aa14.51□□□□□ -0.09
VARS2-209ENST00000477288 IGLC7A0M8Q6 106 aa14.51□□□□□ -0.09
VARS2-209ENST00000477288 AJUBAQ96IF1 538 aa14.51□□□□□ -0.09
VARS2-209ENST00000477288 K7EN84 100 aa14.5□□□□□ -0.09
VARS2-209ENST00000477288 RSPO1Q2MKA7 263 aaPredicted RBP14.5□□□□□ -0.09
VARS2-209ENST00000477288 C4orf48Q5BLP8 95 aa14.5□□□□□ -0.09
VARS2-209ENST00000477288 HEATR5AQ86XA9 2040 aa14.5□□□□□ -0.09
VARS2-209ENST00000477288 C9orf47Q6ZRZ4 202 aa14.5□□□□□ -0.09
VARS2-209ENST00000477288 WIPF2Q8TF74 440 aaPredicted RBP14.5□□□□□ -0.09
VARS2-209ENST00000477288 PLXNA4Q9HCM2 1894 aa14.5□□□□□ -0.09
VARS2-209ENST00000477288 NOTCH3Q9UM47 2321 aa14.5□□□□□ -0.09
VARS2-209ENST00000477288 PCNX2A6NKB5 2137 aa14.5□□□□□ -0.09
VARS2-209ENST00000477288 ZFP2Q6ZN57 461 aa14.5□□□□□ -0.09
VARS2-209ENST00000477288 C14orf132Q9NPU4 83 aa14.5□□□□□ -0.09
VARS2-209ENST00000477288 MRPL36Q9P0J6 103 aaKnown RBP14.5□□□□□ -0.09
VARS2-209ENST00000477288 TANC1Q9C0D5 1861 aa14.49□□□□□ -0.09
VARS2-209ENST00000477288 C8orf31Q8N9H6 132 aa14.48□□□□□ -0.09
VARS2-209ENST00000477288 VSIG2Q96IQ7 327 aa14.48□□□□□ -0.09
VARS2-209ENST00000477288 SND1-IT1Q9HBX3 110 aa14.48□□□□□ -0.09
VARS2-209ENST00000477288 MED13LQ71F56 2210 aa14.48□□□□□ -0.09
VARS2-209ENST00000477288 DOCK9Q9BZ29 2069 aa14.47□□□□□ -0.09
VARS2-209ENST00000477288 RBAKDNA6NC62 111 aa14.47□□□□□ -0.09
VARS2-209ENST00000477288 PCP2Q8IVA1 136 aa14.47□□□□□ -0.09
VARS2-209ENST00000477288 DEFB4AO15263 64 aa14.47□□□□□ -0.09
VARS2-209ENST00000477288 IGHV4OR15-8A0A075B7B6 117 aa14.46□□□□□ -0.09
VARS2-209ENST00000477288 A0A087WW49 117 aa14.46□□□□□ -0.09
VARS2-209ENST00000477288 SIVA1O15304 175 aa14.46□□□□□ -0.09
VARS2-209ENST00000477288 IGHV7-81A0A0B4J1V7 117 aa14.46□□□□□ -0.09
VARS2-209ENST00000477288 CCL25O15444 150 aa14.46□□□□□ -0.09
VARS2-209ENST00000477288 MUC6Q6W4X9 2439 aa14.46□□□□□ -0.09
VARS2-209ENST00000477288 KIAA1671Q9BY89 1806 aa14.46□□□□□ -0.09
VARS2-209ENST00000477288 IGKV3D-7A0A0C4DH55 119 aa14.46□□□□□ -0.09
VARS2-209ENST00000477288 MYLKQ15746 1914 aa14.46□□□□□ -0.09
VARS2-209ENST00000477288 IGLL5B9A064 214 aa14.46□□□□□ -0.1
VARS2-209ENST00000477288 FANCD2OSQ96PS1 177 aa14.45□□□□□ -0.1
VARS2-209ENST00000477288 C11orf52Q96A22 123 aa14.45□□□□□ -0.1
VARS2-209ENST00000477288 MP68P56378 58 aa14.45□□□□□ -0.1
VARS2-209ENST00000477288 SEM1Q6ZVN7 128 aa14.45□□□□□ -0.1
VARS2-209ENST00000477288 C10orf105Q8TEF2 133 aa14.45□□□□□ -0.1
VARS2-209ENST00000477288 POU2AF1Q16633 256 aa14.45□□□□□ -0.1
VARS2-209ENST00000477288 PRR20EP86478 221 aa14.45□□□□□ -0.1
VARS2-209ENST00000477288 PRR20CP86479 221 aa14.45□□□□□ -0.1
VARS2-209ENST00000477288 PRR20DP86480 221 aa14.45□□□□□ -0.1
VARS2-209ENST00000477288 PRR20BP86481 221 aa14.45□□□□□ -0.1
VARS2-209ENST00000477288 PRR20AP86496 221 aa14.45□□□□□ -0.1
VARS2-209ENST00000477288 A0A1B0GX51 115 aa14.44□□□□□ -0.1
VARS2-209ENST00000477288 NREPQ16612 68 aa14.44□□□□□ -0.1
VARS2-209ENST00000477288 SH2D6Q7Z4S9 175 aa14.44□□□□□ -0.1
VARS2-209ENST00000477288 C11orf53Q8IXP5 236 aa14.44□□□□□ -0.1
VARS2-209ENST00000477288 ZNF747Q9BV97 191 aa14.44□□□□□ -0.1
VARS2-209ENST00000477288 DAND5Q8N907 189 aa14.44□□□□□ -0.1
VARS2-209ENST00000477288 RITA1Q96K30 269 aa14.44□□□□□ -0.1
VARS2-209ENST00000477288 MUSTN1Q8IVN3 82 aa14.44□□□□□ -0.1
VARS2-209ENST00000477288 KLK5Q9Y337 293 aaPredicted RBP14.44□□□□□ -0.1
VARS2-209ENST00000477288 PRSS47A8MTI9 375 aa14.43□□□□□ -0.1
VARS2-209ENST00000477288 DAZ2Q13117 558 aaKnown RBP14.43□□□□□ -0.1
VARS2-209ENST00000477288 DAZ4Q86SG3 579 aaKnown RBP14.43□□□□□ -0.1
VARS2-209ENST00000477288 RNF152Q8N8N0 203 aa14.43□□□□□ -0.1
VARS2-209ENST00000477288 DAZ3Q9NR90 486 aaKnown RBP14.43□□□□□ -0.1
VARS2-209ENST00000477288 OPRPNQ99935 248 aaPredicted RBP14.43□□□□□ -0.1
VARS2-209ENST00000477288 ADORA2A-AS1P86434 159 aa14.43□□□□□ -0.1
VARS2-209ENST00000477288 DEFB135Q30KP9 77 aa14.43□□□□□ -0.1
VARS2-209ENST00000477288 LENEPQ9Y5L5 61 aa14.42□□□□□ -0.1
VARS2-209ENST00000477288 PLXNA2O75051 1894 aa14.42□□□□□ -0.1
VARS2-209ENST00000477288 A0A0J9YXV3 536 aa14.42□□□□□ -0.1
VARS2-209ENST00000477288 HHLA3Q9XRX5 114 aa14.41□□□□□ -0.1
VARS2-209ENST00000477288 HELZP42694 1942 aaKnown RBP14.41□□□□□ -0.1
VARS2-209ENST00000477288 NDUFA1O15239 70 aa14.41□□□□□ -0.1
VARS2-209ENST00000477288 K7EMI3 77 aa14.41□□□□□ -0.1
VARS2-209ENST00000477288 TM2D2Q9BX73 214 aa14.4□□□□□ -0.1
VARS2-209ENST00000477288 C5orf56Q8N8D9 126 aa14.4□□□□□ -0.1
VARS2-209ENST00000477288 DOCK11Q5JSL3 2073 aa14.39□□□□□ -0.11
VARS2-209ENST00000477288 Q6ZVH6 145 aa14.39□□□□□ -0.11
VARS2-209ENST00000477288 SS18L2Q9UHA2 77 aa14.39□□□□□ -0.11
VARS2-209ENST00000477288 FAM208BQ5VWN6 2430 aa14.39□□□□□ -0.11
VARS2-209ENST00000477288 SMAD5-AS1Q9Y6J3 95 aa14.39□□□□□ -0.11
VARS2-209ENST00000477288 I3L2K1 104 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms